RNA–Protein interactions for RNA: ENST00000617719.4

ATXN3-251, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-251ENST00000617719 HSPA1LP34931 641 aa6.55□□□□□ -1.36
ATXN3-251ENST00000617719 CPSF6Q16630 551 aaKnown RBP eCLIP6.55□□□□□ -1.36
ATXN3-251ENST00000617719 AKAP4Q5JQC9 854 aa6.55□□□□□ -1.36
ATXN3-251ENST00000617719 TRIM56Q9BRZ2 755 aaKnown RBP6.55□□□□□ -1.36
ATXN3-251ENST00000617719 TIMELESSQ9UNS1 1208 aa6.55□□□□□ -1.36
ATXN3-251ENST00000617719 NCOA3Q9Y6Q9 1424 aa6.55□□□□□ -1.36
ATXN3-251ENST00000617719 PIK3R4Q99570 1358 aa6.55□□□□□ -1.36
ATXN3-251ENST00000617719 XIRP1Q702N8 1843 aaKnown RBP6.55□□□□□ -1.36
ATXN3-251ENST00000617719 MYO5BQ9ULV0 1848 aa6.55□□□□□ -1.36
ATXN3-251ENST00000617719 FAM135BQ49AJ0 1406 aa6.54□□□□□ -1.36
ATXN3-251ENST00000617719 PRNPP04156 253 aa6.54□□□□□ -1.36
ATXN3-251ENST00000617719 CYP11A1P05108 521 aa6.54□□□□□ -1.36
ATXN3-251ENST00000617719 COL19A1Q14993 1142 aa6.54□□□□□ -1.36
ATXN3-251ENST00000617719 POU4F3Q15319 338 aa6.54□□□□□ -1.36
ATXN3-251ENST00000617719 ECM1Q16610 540 aa6.54□□□□□ -1.36
ATXN3-251ENST00000617719 DYMQ7RTS9 669 aa6.54□□□□□ -1.36
ATXN3-251ENST00000617719 METTL22Q9BUU2 404 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-251ENST00000617719 SEMA6CQ9H3T2 930 aa6.54□□□□□ -1.36
ATXN3-251ENST00000617719 FAM105AQ9NUU6 356 aa6.54□□□□□ -1.36
ATXN3-251ENST00000617719 CHD2O14647 1828 aaKnown RBP6.54□□□□□ -1.36
ATXN3-251ENST00000617719 TMEM94Q12767 1356 aa6.54□□□□□ -1.36
ATXN3-251ENST00000617719 NKTRP30414 1462 aaKnown RBP6.53□□□□□ -1.36
ATXN3-251ENST00000617719 NWD1Q149M9 1564 aa6.53□□□□□ -1.36
ATXN3-251ENST00000617719 KRTAP4-8A0A0G2JLE6 195 aa6.53□□□□□ -1.36
ATXN3-251ENST00000617719 DYNC1LI2O43237 492 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-251ENST00000617719 ICMTO60725 284 aa6.53□□□□□ -1.36
ATXN3-251ENST00000617719 VSIG10LQ86VR7 867 aa6.53□□□□□ -1.36
ATXN3-251ENST00000617719 YIPF2Q9BWQ6 316 aa6.53□□□□□ -1.36
ATXN3-251ENST00000617719 LRRC4CQ9HCJ2 640 aa6.53□□□□□ -1.36
ATXN3-251ENST00000617719 RPGRIP1LQ68CZ1 1315 aa6.52□□□□□ -1.37
ATXN3-251ENST00000617719 TRPM2O94759 1503 aa6.52□□□□□ -1.37
ATXN3-251ENST00000617719 YBX3P16989 372 aaKnown RBP eCLIP6.52□□□□□ -1.37
ATXN3-251ENST00000617719 SERPINB4P48594 390 aa6.52□□□□□ -1.37
ATXN3-251ENST00000617719 ORC1Q13415 861 aa6.52□□□□□ -1.37
ATXN3-251ENST00000617719 ZNF765Q7L2R6 523 aa6.52□□□□□ -1.37
ATXN3-251ENST00000617719 TP53INP2Q8IXH6 220 aa6.52□□□□□ -1.37
ATXN3-251ENST00000617719 ACSS3Q9H6R3 686 aa6.52□□□□□ -1.37
ATXN3-251ENST00000617719 BSDC1Q9NW68 430 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-251ENST00000617719 AP4E1Q9UPM8 1137 aa6.52□□□□□ -1.37
ATXN3-251ENST00000617719 SPHKAPQ2M3C7 1700 aa6.52□□□□□ -1.37
ATXN3-251ENST00000617719 H3BRB1 525 aa6.51□□□□□ -1.37
ATXN3-251ENST00000617719 EIF4EBP3O60516 100 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-251ENST00000617719 B3GALT4O96024 378 aa6.51□□□□□ -1.37
ATXN3-251ENST00000617719 KIAA0319Q5VV43 1072 aa6.51□□□□□ -1.37
ATXN3-251ENST00000617719 CBLL1Q75N03 491 aa6.51□□□□□ -1.37
ATXN3-251ENST00000617719 MPHOSPH9Q99550 1183 aa6.51□□□□□ -1.37
ATXN3-251ENST00000617719 CORO1BQ9BR76 489 aa6.51□□□□□ -1.37
ATXN3-251ENST00000617719 ZNF576Q9H609 170 aa6.51□□□□□ -1.37
ATXN3-251ENST00000617719 TUT1Q9H6E5 874 aaKnown RBP6.51□□□□□ -1.37
ATXN3-251ENST00000617719 C19orf44Q9H6X5 657 aa6.51□□□□□ -1.37
ATXN3-251ENST00000617719 LGR6Q9HBX8 967 aa6.51□□□□□ -1.37
ATXN3-251ENST00000617719 RAD18Q9NS91 495 aa6.51□□□□□ -1.37
ATXN3-251ENST00000617719 ZC3H7BQ9UGR2 993 aaKnown RBP6.51□□□□□ -1.37
ATXN3-251ENST00000617719 BRPF3Q9ULD4 1205 aa6.51□□□□□ -1.37
ATXN3-251ENST00000617719 DIP2AQ14689 1571 aa6.51□□□□□ -1.37
ATXN3-251ENST00000617719 SETBP1Q9Y6X0 1596 aa6.51□□□□□ -1.37
ATXN3-251ENST00000617719 PTPRUQ92729 1446 aa6.5□□□□□ -1.37
ATXN3-251ENST00000617719 CLTCL1P53675 1640 aa6.5□□□□□ -1.37
ATXN3-251ENST00000617719 NRXN3Q9Y4C0 1643 aa6.5□□□□□ -1.37
ATXN3-251ENST00000617719 METP08581 1390 aa6.5□□□□□ -1.37
ATXN3-251ENST00000617719 ASPAP45381 313 aa6.5□□□□□ -1.37
ATXN3-251ENST00000617719 ARHGAP4P98171 946 aa6.5□□□□□ -1.37
ATXN3-251ENST00000617719 MAP7Q14244 749 aa6.5□□□□□ -1.37
ATXN3-251ENST00000617719 FBXL18Q96ME1 805 aa6.5□□□□□ -1.37
ATXN3-251ENST00000617719 ANP32EQ9BTT0 268 aa6.5□□□□□ -1.37
ATXN3-251ENST00000617719 EHD4Q9H223 541 aa6.5□□□□□ -1.37
ATXN3-251ENST00000617719 NPHS2Q9NP85 383 aa6.5□□□□□ -1.37
ATXN3-251ENST00000617719 PAK6Q9NQU5 681 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-251ENST00000617719 C1GALT1Q9NS00 363 aa6.5□□□□□ -1.37
ATXN3-251ENST00000617719 EGFL7Q9UHF1 273 aa6.5□□□□□ -1.37
ATXN3-251ENST00000617719 NEXMIFQ5QGS0 1516 aa6.5□□□□□ -1.37
ATXN3-251ENST00000617719 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-251ENST00000617719 AOC2O75106 756 aa6.49□□□□□ -1.37
ATXN3-251ENST00000617719 ITPKAP23677 461 aa6.49□□□□□ -1.37
ATXN3-251ENST00000617719 DUSP27Q5VZP5 1158 aa6.49□□□□□ -1.37
ATXN3-251ENST00000617719 SEZ6L2Q6UXD5 910 aa6.49□□□□□ -1.37
ATXN3-251ENST00000617719 GLYCTKQ8IVS8 523 aa6.49□□□□□ -1.37
ATXN3-251ENST00000617719 FLCNQ8NFG4 579 aa6.49□□□□□ -1.37
ATXN3-251ENST00000617719 WDR18Q9BV38 432 aa6.49□□□□□ -1.37
ATXN3-251ENST00000617719 GSX1Q9H4S2 264 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-251ENST00000617719 PPP1R9AQ9ULJ8 1098 aa6.49□□□□□ -1.37
ATXN3-251ENST00000617719 DAGLAQ9Y4D2 1042 aa6.49□□□□□ -1.37
ATXN3-251ENST00000617719 SPATA31E1Q6ZUB1 1445 aa6.49□□□□□ -1.37
ATXN3-251ENST00000617719 PRAG1Q86YV5 1406 aa6.49□□□□□ -1.37
ATXN3-251ENST00000617719 SETD5Q9C0A6 1442 aa6.49□□□□□ -1.37
ATXN3-251ENST00000617719 MSH6P52701 1360 aa6.48□□□□□ -1.37
ATXN3-251ENST00000617719 PDE3AQ14432 1141 aa6.48□□□□□ -1.37
ATXN3-251ENST00000617719 ZNF326Q5BKZ1 582 aaKnown RBP6.48□□□□□ -1.37
ATXN3-251ENST00000617719 HP1BP3Q5SSJ5 553 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-251ENST00000617719 ABCB6Q9NP58 842 aa6.48□□□□□ -1.37
ATXN3-251ENST00000617719 CPNE3O75131 537 aaKnown RBP6.47□□□□□ -1.37
ATXN3-251ENST00000617719 ZNF157P51786 506 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-251ENST00000617719 OGFOD2Q6N063 350 aa6.47□□□□□ -1.37
ATXN3-251ENST00000617719 WDR89Q96FK6 387 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-251ENST00000617719 KIF1BO60333 1816 aa6.47□□□□□ -1.37
ATXN3-251ENST00000617719 XRN1Q8IZH2 1706 aaKnown RBP6.47□□□□□ -1.37
ATXN3-251ENST00000617719 NDUFB5O43674 189 aa6.46□□□□□ -1.38
ATXN3-251ENST00000617719 ITGB5P18084 799 aa6.46□□□□□ -1.38
ATXN3-251ENST00000617719 LIG1P18858 919 aa6.46□□□□□ -1.38
ATXN3-251ENST00000617719 DCCP43146 1447 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms