RNA–Protein interactions for RNA: ENST00000617697.4

SLC39A1-210, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLC39A1, Length 2,214 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-210ENST00000617697 IQSEC3Q9UPP2 1182 aaPredicted RBP20.49■□□□□ 0.87
SLC39A1-210ENST00000617697 PCDHA5Q9Y5H7 936 aa20.49■□□□□ 0.87
SLC39A1-210ENST00000617697 SRPRBQ9Y5M8 271 aaKnown RBP20.49■□□□□ 0.87
SLC39A1-210ENST00000617697 PDS5AQ29RF7 1337 aaKnown RBP20.48■□□□□ 0.87
SLC39A1-210ENST00000617697 USP27XA6NNY8 438 aa20.48■□□□□ 0.87
SLC39A1-210ENST00000617697 GTF2E1P29083 439 aaPredicted RBP20.48■□□□□ 0.87
SLC39A1-210ENST00000617697 CFAP100Q494V2 611 aa20.48■□□□□ 0.87
SLC39A1-210ENST00000617697 ERFEQ4G0M1 354 aa20.48■□□□□ 0.87
SLC39A1-210ENST00000617697 IFIT1BQ5T764 474 aaKnown RBP20.48■□□□□ 0.87
SLC39A1-210ENST00000617697 ARMCX5Q6P1M9 558 aa20.48■□□□□ 0.87
SLC39A1-210ENST00000617697 KRT2P35908 639 aa20.47■□□□□ 0.87
SLC39A1-210ENST00000617697 ADGRA1Q86SQ6 560 aa20.47■□□□□ 0.87
SLC39A1-210ENST00000617697 SMARCE1Q969G3 411 aa20.47■□□□□ 0.87
SLC39A1-210ENST00000617697 TRMT1Q9NXH9 659 aaKnown RBP20.47■□□□□ 0.87
SLC39A1-210ENST00000617697 UBE2Q2LH0YL09 131 aa20.47■□□□□ 0.87
SLC39A1-210ENST00000617697 PRPF3O43395 683 aaKnown RBP20.47■□□□□ 0.87
SLC39A1-210ENST00000617697 DDAH1O94760 285 aa20.47■□□□□ 0.87
SLC39A1-210ENST00000617697 CCDC82Q8N4S0 544 aa20.47■□□□□ 0.87
SLC39A1-210ENST00000617697 NYXQ9GZU5 481 aa20.47■□□□□ 0.87
SLC39A1-210ENST00000617697 CGNQ9P2M7 1197 aaKnown RBP20.47■□□□□ 0.87
SLC39A1-210ENST00000617697 MYH13Q9UKX3 1938 aa20.47■□□□□ 0.87
SLC39A1-210ENST00000617697 MAST2Q6P0Q8 1798 aa20.47■□□□□ 0.87
SLC39A1-210ENST00000617697 TRIM75PA6NK02 468 aa20.46■□□□□ 0.87
SLC39A1-210ENST00000617697 COL1A1P02452 1464 aaPredicted RBP20.46■□□□□ 0.87
SLC39A1-210ENST00000617697 MDM2Q00987 491 aaPredicted RBP20.46■□□□□ 0.87
SLC39A1-210ENST00000617697 NCBP1Q09161 790 aaKnown RBP20.46■□□□□ 0.87
SLC39A1-210ENST00000617697 PPP4R3BQ5MIZ7 849 aa20.46■□□□□ 0.87
SLC39A1-210ENST00000617697 NT5DC1Q5TFE4 455 aa20.46■□□□□ 0.87
SLC39A1-210ENST00000617697 ENAHQ8N8S7 591 aaPredicted RBP20.46■□□□□ 0.87
SLC39A1-210ENST00000617697 LAMB1P07942 1786 aa20.45■□□□□ 0.86
SLC39A1-210ENST00000617697 POLR2DO15514 142 aaKnown RBP20.45■□□□□ 0.86
SLC39A1-210ENST00000617697 TOP1P11387 765 aaKnown RBP20.45■□□□□ 0.86
SLC39A1-210ENST00000617697 CT47A1Q5JQC4 288 aaPredicted RBP20.45■□□□□ 0.86
SLC39A1-210ENST00000617697 ANKRD2Q9GZV1 360 aa20.45■□□□□ 0.86
SLC39A1-210ENST00000617697 HSD3B7Q9H2F3 369 aa20.45■□□□□ 0.86
SLC39A1-210ENST00000617697 MINPP1Q9UNW1 487 aa20.45■□□□□ 0.86
SLC39A1-210ENST00000617697 PCDHB6Q9Y5E3 794 aa20.45■□□□□ 0.86
SLC39A1-210ENST00000617697 CNTNAP4Q9C0A0 1308 aa20.45■□□□□ 0.86
SLC39A1-210ENST00000617697 FGRP09769 529 aa20.45■□□□□ 0.86
SLC39A1-210ENST00000617697 ATP1A3P13637 1013 aa20.45■□□□□ 0.86
SLC39A1-210ENST00000617697 NR5A1Q13285 461 aa20.45■□□□□ 0.86
SLC39A1-210ENST00000617697 SLC10A5Q5PT55 438 aa20.45■□□□□ 0.86
SLC39A1-210ENST00000617697 VSTM4Q8IW00 320 aa20.45■□□□□ 0.86
SLC39A1-210ENST00000617697 CABP5Q9NP86 173 aa20.45■□□□□ 0.86
SLC39A1-210ENST00000617697 NT5C2P49902 561 aa20.44■□□□□ 0.86
SLC39A1-210ENST00000617697 FERMT2Q96AC1 680 aa20.44■□□□□ 0.86
SLC39A1-210ENST00000617697 PPP1R13BQ96KQ4 1090 aa20.44■□□□□ 0.86
SLC39A1-210ENST00000617697 PHF20Q9BVI0 1012 aa20.44■□□□□ 0.86
SLC39A1-210ENST00000617697 CRNKL1Q9BZJ0 848 aaKnown RBP20.44■□□□□ 0.86
SLC39A1-210ENST00000617697 AATFQ9NY61 560 aaKnown RBP eCLIP20.44■□□□□ 0.86
SLC39A1-210ENST00000617697 MAN1B1Q9UKM7 699 aa20.44■□□□□ 0.86
SLC39A1-210ENST00000617697 E4F1Q66K89 784 aaPredicted RBP20.43■□□□□ 0.86
SLC39A1-210ENST00000617697 FCHSD1Q86WN1 690 aa20.43■□□□□ 0.86
SLC39A1-210ENST00000617697 CMTR1Q8N1G2 835 aaKnown RBP20.43■□□□□ 0.86
SLC39A1-210ENST00000617697 ERO1AQ96HE7 468 aa20.43■□□□□ 0.86
SLC39A1-210ENST00000617697 SERTAD1Q9UHV2 236 aa20.43■□□□□ 0.86
SLC39A1-210ENST00000617697 ENOX1Q8TC92 643 aaKnown RBP20.43■□□□□ 0.86
SLC39A1-210ENST00000617697 FAM84BQ96KN1 310 aaPredicted RBP20.43■□□□□ 0.86
SLC39A1-210ENST00000617697 ARID3AQ99856 593 aa20.43■□□□□ 0.86
SLC39A1-210ENST00000617697 FANCLQ9NW38 375 aa20.43■□□□□ 0.86
SLC39A1-210ENST00000617697 BAZ2AQ9UIF9 1905 aaKnown RBP20.43■□□□□ 0.86
SLC39A1-210ENST00000617697 MYH2Q9UKX2 1941 aa20.43■□□□□ 0.86
SLC39A1-210ENST00000617697 COL4A1P02462 1669 aa20.43■□□□□ 0.86
SLC39A1-210ENST00000617697 ORC4O43929 436 aa20.42■□□□□ 0.86
SLC39A1-210ENST00000617697 MORC3Q14149 939 aa20.42■□□□□ 0.86
SLC39A1-210ENST00000617697 SPECC1Q5M775 1068 aa20.42■□□□□ 0.86
SLC39A1-210ENST00000617697 CTCFLQ8NI51 663 aaPredicted RBP20.42■□□□□ 0.86
SLC39A1-210ENST00000617697 FEZ1Q99689 392 aa20.42■□□□□ 0.86
SLC39A1-210ENST00000617697 IGSF3O75054 1194 aa20.42■□□□□ 0.86
SLC39A1-210ENST00000617697 SARSP49591 514 aaKnown RBP20.42■□□□□ 0.86
SLC39A1-210ENST00000617697 DYNLL1P63167 89 aaKnown RBP20.42■□□□□ 0.86
SLC39A1-210ENST00000617697 FBXO33Q7Z6M2 555 aa20.42■□□□□ 0.86
SLC39A1-210ENST00000617697 FOXP4Q8IVH2 680 aaPredicted RBP20.42■□□□□ 0.86
SLC39A1-210ENST00000617697 OXER1Q8TDS5 423 aa20.42■□□□□ 0.86
SLC39A1-210ENST00000617697 ATP8A2Q9NTI2 1148 aa20.42■□□□□ 0.86
SLC39A1-210ENST00000617697 ARPP21Q9UBL0 812 aaPredicted RBP20.42■□□□□ 0.86
SLC39A1-210ENST00000617697 ATP2B1P20020 1258 aa20.41■□□□□ 0.86
SLC39A1-210ENST00000617697 CDK11BP21127 795 aaKnown RBP20.41■□□□□ 0.86
SLC39A1-210ENST00000617697 CTR9Q6PD62 1173 aa20.41■□□□□ 0.86
SLC39A1-210ENST00000617697 NUTM2AQ8IVF1 878 aaPredicted RBP20.41■□□□□ 0.86
SLC39A1-210ENST00000617697 SMAP1Q8IYB5 467 aaPredicted RBP20.41■□□□□ 0.86
SLC39A1-210ENST00000617697 LINC00116Q8NCU8 138 aa20.41■□□□□ 0.86
SLC39A1-210ENST00000617697 NLRP3Q96P20 1036 aa20.41■□□□□ 0.86
SLC39A1-210ENST00000617697 PYM1Q9BRP8 204 aaKnown RBP20.41■□□□□ 0.86
SLC39A1-210ENST00000617697 CSRNP2Q9H175 543 aa20.41■□□□□ 0.86
SLC39A1-210ENST00000617697 VPS54Q9P1Q0 977 aa20.41■□□□□ 0.86
SLC39A1-210ENST00000617697 CCDC88AQ3V6T2 1871 aa20.41■□□□□ 0.86
SLC39A1-210ENST00000617697 ZSCAN12O43309 604 aa20.41■□□□□ 0.86
SLC39A1-210ENST00000617697 ACTN4O43707 911 aaKnown RBP20.41■□□□□ 0.86
SLC39A1-210ENST00000617697 SLU7O95391 586 aaKnown RBP20.41■□□□□ 0.86
SLC39A1-210ENST00000617697 ERCC5P28715 1186 aaPredicted RBP20.41■□□□□ 0.86
SLC39A1-210ENST00000617697 TMTC3Q6ZXV5 915 aa20.41■□□□□ 0.86
SLC39A1-210ENST00000617697 PKN1Q16512 942 aa20.4■□□□□ 0.86
SLC39A1-210ENST00000617697 C3orf67Q6ZVT6 689 aa20.4■□□□□ 0.86
SLC39A1-210ENST00000617697 NSUN4Q96CB9 384 aaKnown RBP20.4■□□□□ 0.86
SLC39A1-210ENST00000617697 COL24A1Q17RW2 1714 aa20.4■□□□□ 0.86
SLC39A1-210ENST00000617697 FOXN1O15353 648 aa20.39■□□□□ 0.86
SLC39A1-210ENST00000617697 HIBADHP31937 336 aaKnown RBP20.39■□□□□ 0.86
SLC39A1-210ENST00000617697 PLCD1P51178 756 aa20.39■□□□□ 0.86
SLC39A1-210ENST00000617697 RPS8P62241 208 aaKnown RBP20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms