RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 FOCADQ5VW36 1801 aa24.04■■□□□ 1.44
SDHA-220ENST00000617470 DDTLA6NHG4 134 aaPredicted RBP24.03■■□□□ 1.44
SDHA-220ENST00000617470 JAK2O60674 1132 aa24.03■■□□□ 1.44
SDHA-220ENST00000617470 KRT26Q7Z3Y9 468 aa24.03■■□□□ 1.44
SDHA-220ENST00000617470 WDR19Q8NEZ3 1342 aa24.03■■□□□ 1.44
SDHA-220ENST00000617470 PDIA3P30101 505 aaKnown RBP24.03■■□□□ 1.44
SDHA-220ENST00000617470 EVX2Q03828 476 aa24.03■■□□□ 1.44
SDHA-220ENST00000617470 PRAMEF18Q5VWM3 479 aa24.03■■□□□ 1.44
SDHA-220ENST00000617470 ADM5C9JUS6 153 aa24.02■■□□□ 1.44
SDHA-220ENST00000617470 PRPF40AO75400 957 aaKnown RBP24.02■■□□□ 1.44
SDHA-220ENST00000617470 F13A1P00488 732 aa24.02■■□□□ 1.44
SDHA-220ENST00000617470 HLA-DOAP06340 250 aa24.02■■□□□ 1.44
SDHA-220ENST00000617470 PLCD1P51178 756 aa24.02■■□□□ 1.44
SDHA-220ENST00000617470 MAP1SQ66K74 1059 aaPredicted RBP24.02■■□□□ 1.44
SDHA-220ENST00000617470 SH3BP5LQ7L8J4 393 aa24.02■■□□□ 1.44
SDHA-220ENST00000617470 TTC6Q86TZ1 520 aa24.02■■□□□ 1.44
SDHA-220ENST00000617470 ZNF274Q96GC6 653 aaPredicted RBP24.02■■□□□ 1.44
SDHA-220ENST00000617470 CSRNP1Q96S65 589 aa24.02■■□□□ 1.44
SDHA-220ENST00000617470 DHX36Q9H2U1 1008 aaKnown RBP24.02■■□□□ 1.44
SDHA-220ENST00000617470 INCENPQ9NQS7 918 aa24.02■■□□□ 1.44
SDHA-220ENST00000617470 NEDD4P46934 1319 aa24.02■■□□□ 1.44
SDHA-220ENST00000617470 CTDNEP1O95476 244 aa24.02■■□□□ 1.43
SDHA-220ENST00000617470 PPARAQ07869 468 aa24.02■■□□□ 1.43
SDHA-220ENST00000617470 CYB5R4Q7L1T6 521 aa24.02■■□□□ 1.43
SDHA-220ENST00000617470 RALYLQ86SE5 291 aaKnown RBP24.02■■□□□ 1.43
SDHA-220ENST00000617470 USP48Q86UV5 1035 aa24.02■■□□□ 1.43
SDHA-220ENST00000617470 LDHDQ86WU2 507 aa24.02■■□□□ 1.43
SDHA-220ENST00000617470 CDAN1Q8IWY9 1227 aa24.02■■□□□ 1.43
SDHA-220ENST00000617470 SMARCC2Q8TAQ2 1214 aa24.02■■□□□ 1.43
SDHA-220ENST00000617470 PGAP2Q9UHJ9 254 aa24.02■■□□□ 1.43
SDHA-220ENST00000617470 MYH1P12882 1939 aa24.01■■□□□ 1.43
SDHA-220ENST00000617470 SMIM22K7EJ46 135 aa24.01■■□□□ 1.43
SDHA-220ENST00000617470 CTDSPL2Q05D32 466 aa24.01■■□□□ 1.43
SDHA-220ENST00000617470 FOXD4L6Q3SYB3 417 aaPredicted RBP24.01■■□□□ 1.43
SDHA-220ENST00000617470 SBK1Q52WX2 424 aa24.01■■□□□ 1.43
SDHA-220ENST00000617470 C12orf60Q5U649 245 aa24.01■■□□□ 1.43
SDHA-220ENST00000617470 LARP1BQ659C4 914 aaKnown RBP24.01■■□□□ 1.43
SDHA-220ENST00000617470 FOXD4L3Q6VB84 417 aaPredicted RBP24.01■■□□□ 1.43
SDHA-220ENST00000617470 BRPF3Q9ULD4 1205 aa24.01■■□□□ 1.43
SDHA-220ENST00000617470 KLHL40Q2TBA0 621 aa24■■□□□ 1.43
SDHA-220ENST00000617470 DLK2Q6UY11 383 aa24■■□□□ 1.43
SDHA-220ENST00000617470 GLIS2Q9BZE0 524 aaPredicted RBP24■■□□□ 1.43
SDHA-220ENST00000617470 TCHHQ07283 1943 aa24■■□□□ 1.43
SDHA-220ENST00000617470 POLR2AP24928 1970 aaKnown RBP24■■□□□ 1.43
SDHA-220ENST00000617470 NCOA5Q9HCD5 579 aaKnown RBP24■■□□□ 1.43
SDHA-220ENST00000617470 CCT2P78371 535 aaKnown RBP23.99■■□□□ 1.43
SDHA-220ENST00000617470 CDC37L1Q7L3B6 337 aa23.99■■□□□ 1.43
SDHA-220ENST00000617470 CRACR2BQ8N4Y2 399 aaPredicted RBP23.99■■□□□ 1.43
SDHA-220ENST00000617470 NSUN7Q8NE18 718 aaKnown RBP23.99■■□□□ 1.43
SDHA-220ENST00000617470 DYNLL2Q96FJ2 89 aa23.99■■□□□ 1.43
SDHA-220ENST00000617470 LLPHQ9BRT6 129 aaKnown RBP23.99■■□□□ 1.43
SDHA-220ENST00000617470 TRIM34Q9BYJ4 488 aa23.99■■□□□ 1.43
SDHA-220ENST00000617470 PI4KBQ9UBF8 816 aa23.99■■□□□ 1.43
SDHA-220ENST00000617470 B4E1Z4 1266 aa23.98■■□□□ 1.43
SDHA-220ENST00000617470 TRDNQ13061 729 aa23.98■■□□□ 1.43
SDHA-220ENST00000617470 PPP2R3BQ9Y5P8 575 aa23.98■■□□□ 1.43
SDHA-220ENST00000617470 DDX49Q9Y6V7 483 aaKnown RBP23.98■■□□□ 1.43
SDHA-220ENST00000617470 ATRNL1Q5VV63 1379 aa23.98■■□□□ 1.43
SDHA-220ENST00000617470 SLC3A2P08195 630 aaKnown RBP23.98■■□□□ 1.43
SDHA-220ENST00000617470 NBPF12Q5TAG4 269 aaPredicted RBP23.98■■□□□ 1.43
SDHA-220ENST00000617470 GPT2Q8TD30 523 aa23.98■■□□□ 1.43
SDHA-220ENST00000617470 TEPSINQ96N21 525 aa23.98■■□□□ 1.43
SDHA-220ENST00000617470 HPS5Q9UPZ3 1129 aa23.98■■□□□ 1.43
SDHA-220ENST00000617470 DDX60LQ5H9U9 1706 aaKnown RBP23.97■■□□□ 1.43
SDHA-220ENST00000617470 VPS37CA5D8V6 355 aaPredicted RBP23.97■■□□□ 1.43
SDHA-220ENST00000617470 SLURP2P0DP57 97 aa23.97■■□□□ 1.43
SDHA-220ENST00000617470 PDCP20941 246 aa23.97■■□□□ 1.43
SDHA-220ENST00000617470 SERPINB13Q9UIV8 391 aa23.97■■□□□ 1.43
SDHA-220ENST00000617470 FAM196BA6NMK8 535 aa23.96■■□□□ 1.43
SDHA-220ENST00000617470 AKNAD1Q5T1N1 836 aa23.96■■□□□ 1.43
SDHA-220ENST00000617470 MIGA2Q7L4E1 593 aa23.96■■□□□ 1.43
SDHA-220ENST00000617470 ZNF784Q8NCA9 323 aaPredicted RBP23.96■■□□□ 1.43
SDHA-220ENST00000617470 TOMM22Q9NS69 142 aa23.96■■□□□ 1.43
SDHA-220ENST00000617470 COL2A1P02458 1487 aaPredicted RBP23.96■■□□□ 1.43
SDHA-220ENST00000617470 DDX11Q96FC9 970 aa23.96■■□□□ 1.43
SDHA-220ENST00000617470 GDPD2Q9HCC8 539 aa23.96■■□□□ 1.43
SDHA-220ENST00000617470 KLF18A0A0U1RQI7 1052 aa23.95■■□□□ 1.42
SDHA-220ENST00000617470 SH2B2O14492 632 aaPredicted RBP23.95■■□□□ 1.42
SDHA-220ENST00000617470 KIF3CO14782 793 aa23.95■■□□□ 1.42
SDHA-220ENST00000617470 PDIA4P13667 645 aaKnown RBP23.95■■□□□ 1.42
SDHA-220ENST00000617470 SLC44A5Q8NCS7 719 aa23.95■■□□□ 1.42
SDHA-220ENST00000617470 STAG1Q8WVM7 1258 aa23.95■■□□□ 1.42
SDHA-220ENST00000617470 ANAPC4Q9UJX5 808 aa23.95■■□□□ 1.42
SDHA-220ENST00000617470 PRDM1O75626 825 aa23.94■■□□□ 1.42
SDHA-220ENST00000617470 CHADLQ6NUI6 762 aa23.94■■□□□ 1.42
SDHA-220ENST00000617470 FOXP4Q8IVH2 680 aaPredicted RBP23.94■■□□□ 1.42
SDHA-220ENST00000617470 IGDCC4Q8TDY8 1250 aa23.94■■□□□ 1.42
SDHA-220ENST00000617470 SENP2Q9HC62 589 aa23.94■■□□□ 1.42
SDHA-220ENST00000617470 NAP1L2Q9ULW6 460 aaPredicted RBP23.94■■□□□ 1.42
SDHA-220ENST00000617470 CNPY2Q9Y2B0 182 aa23.94■■□□□ 1.42
SDHA-220ENST00000617470 PTPDC1A2A3K4 754 aa23.94■■□□□ 1.42
SDHA-220ENST00000617470 PDE4BQ07343 736 aa23.94■■□□□ 1.42
SDHA-220ENST00000617470 SUPT20HL1Q3ZLR7 823 aa23.94■■□□□ 1.42
SDHA-220ENST00000617470 RRP12Q5JTH9 1297 aaKnown RBP23.94■■□□□ 1.42
SDHA-220ENST00000617470 MFSD6Q6ZSS7 791 aa23.94■■□□□ 1.42
SDHA-220ENST00000617470 CDCA5Q96FF9 252 aa23.94■■□□□ 1.42
SDHA-220ENST00000617470 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.94■■□□□ 1.42
SDHA-220ENST00000617470 MKNK2Q9HBH9 465 aa23.94■■□□□ 1.42
SDHA-220ENST00000617470 ZSWIM5Q9P217 1185 aa23.94■■□□□ 1.42
SDHA-220ENST00000617470 ANGEL1Q9UNK9 670 aaKnown RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms