RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 ANGEL2Q5VTE6 544 aaKnown RBP17.87■□□□□ 0.45
CBWD1-225ENST00000616944 FOXP4Q8IVH2 680 aaPredicted RBP17.87■□□□□ 0.45
CBWD1-225ENST00000616944 LY9Q9HBG7 655 aa17.87■□□□□ 0.45
CBWD1-225ENST00000616944 MKNK2Q9HBH9 465 aa17.87■□□□□ 0.45
CBWD1-225ENST00000616944 GGA3Q9NZ52 723 aa17.87■□□□□ 0.45
CBWD1-225ENST00000616944 LIFRP42702 1097 aa17.86■□□□□ 0.45
CBWD1-225ENST00000616944 ME3Q16798 604 aa17.86■□□□□ 0.45
CBWD1-225ENST00000616944 FAM47AQ5JRC9 791 aa17.86■□□□□ 0.45
CBWD1-225ENST00000616944 TATDN1Q6P1N9 297 aa17.86■□□□□ 0.45
CBWD1-225ENST00000616944 SGMS1Q86VZ5 419 aa17.86■□□□□ 0.45
CBWD1-225ENST00000616944 APOBEC3FQ8IUX4 373 aaKnown RBP17.86■□□□□ 0.45
CBWD1-225ENST00000616944 SENP2Q9HC62 589 aa17.86■□□□□ 0.45
CBWD1-225ENST00000616944 HERC5Q9UII4 1024 aaKnown RBP17.86■□□□□ 0.45
CBWD1-225ENST00000616944 SCAF8Q9UPN6 1271 aaKnown RBP17.86■□□□□ 0.45
CBWD1-225ENST00000616944 TNKSO95271 1327 aa17.86■□□□□ 0.45
CBWD1-225ENST00000616944 TSPY2A6NKD2 308 aa17.85■□□□□ 0.45
CBWD1-225ENST00000616944 MAP3K10Q02779 954 aa17.85■□□□□ 0.45
CBWD1-225ENST00000616944 CUL4AQ13619 759 aa17.85■□□□□ 0.45
CBWD1-225ENST00000616944 ENAHQ8N8S7 591 aaPredicted RBP17.85■□□□□ 0.45
CBWD1-225ENST00000616944 ZSCAN10Q96SZ4 725 aaPredicted RBP17.85■□□□□ 0.45
CBWD1-225ENST00000616944 ZKSCAN3Q9BRR0 538 aa17.85■□□□□ 0.45
CBWD1-225ENST00000616944 DEFB129Q9H1M3 183 aa17.85■□□□□ 0.45
CBWD1-225ENST00000616944 IL17RBQ9NRM6 502 aa17.85■□□□□ 0.45
CBWD1-225ENST00000616944 TCP11L1Q9NUJ3 509 aa17.85■□□□□ 0.45
CBWD1-225ENST00000616944 PAPPA2Q9BXP8 1791 aa17.85■□□□□ 0.45
CBWD1-225ENST00000616944 FAM196BA6NMK8 535 aa17.84■□□□□ 0.45
CBWD1-225ENST00000616944 IFIT3O14879 490 aaKnown RBP17.84■□□□□ 0.45
CBWD1-225ENST00000616944 TBC1D12O60347 775 aa17.84■□□□□ 0.45
CBWD1-225ENST00000616944 EPHX2P34913 555 aa17.84■□□□□ 0.45
CBWD1-225ENST00000616944 FGD1P98174 961 aa17.84■□□□□ 0.45
CBWD1-225ENST00000616944 TFAP4Q01664 338 aa17.84■□□□□ 0.45
CBWD1-225ENST00000616944 APOBRQ0VD83 1088 aa17.84■□□□□ 0.45
CBWD1-225ENST00000616944 ST3GAL1Q11201 340 aa17.84■□□□□ 0.45
CBWD1-225ENST00000616944 SART3Q15020 963 aaKnown RBP17.84■□□□□ 0.45
CBWD1-225ENST00000616944 TMEM67Q5HYA8 995 aa17.84■□□□□ 0.45
CBWD1-225ENST00000616944 USP50Q70EL3 339 aaPredicted RBP17.84■□□□□ 0.45
CBWD1-225ENST00000616944 IQCA1Q86XH1 822 aa17.84■□□□□ 0.45
CBWD1-225ENST00000616944 ZNF444Q8N0Y2 327 aaPredicted RBP17.84■□□□□ 0.45
CBWD1-225ENST00000616944 CRACR2BQ8N4Y2 399 aaPredicted RBP17.84■□□□□ 0.45
CBWD1-225ENST00000616944 NEDD1Q8NHV4 660 aa17.84■□□□□ 0.45
CBWD1-225ENST00000616944 ZSCAN31Q96LW9 406 aaPredicted RBP17.84■□□□□ 0.45
CBWD1-225ENST00000616944 UBAC1Q9BSL1 405 aa17.84■□□□□ 0.45
CBWD1-225ENST00000616944 SH2B1Q9NRF2 756 aaPredicted RBP17.84■□□□□ 0.45
CBWD1-225ENST00000616944 IQCA1LA6NCM1 817 aa17.83■□□□□ 0.45
CBWD1-225ENST00000616944 NMT2O60551 498 aa17.83■□□□□ 0.45
CBWD1-225ENST00000616944 RCSD1Q6JBY9 416 aa17.83■□□□□ 0.45
CBWD1-225ENST00000616944 ZNF784Q8NCA9 323 aaPredicted RBP17.83■□□□□ 0.45
CBWD1-225ENST00000616944 ZNF274Q96GC6 653 aaPredicted RBP17.83■□□□□ 0.45
CBWD1-225ENST00000616944 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.83■□□□□ 0.45
CBWD1-225ENST00000616944 TAF1DQ9H5J8 278 aaPredicted RBP17.83■□□□□ 0.45
CBWD1-225ENST00000616944 BRPF3Q9ULD4 1205 aa17.83■□□□□ 0.45
CBWD1-225ENST00000616944 IGKV6D-41A0A0C4DH26 115 aa17.83■□□□□ 0.44
CBWD1-225ENST00000616944 TSPY3P0CV98 308 aa17.83■□□□□ 0.44
CBWD1-225ENST00000616944 TSPY8P0CW00 308 aa17.83■□□□□ 0.44
CBWD1-225ENST00000616944 NOVP48745 357 aa17.83■□□□□ 0.44
CBWD1-225ENST00000616944 PPP2R3BQ9Y5P8 575 aa17.83■□□□□ 0.44
CBWD1-225ENST00000616944 DOCK1Q14185 1865 aa17.83■□□□□ 0.44
CBWD1-225ENST00000616944 SSC5DA1L4H1 1573 aa17.82■□□□□ 0.44
CBWD1-225ENST00000616944 AKR1B1P15121 316 aa17.82■□□□□ 0.44
CBWD1-225ENST00000616944 WTAPQ15007 396 aa17.82■□□□□ 0.44
CBWD1-225ENST00000616944 APOA5Q6Q788 366 aa17.82■□□□□ 0.44
CBWD1-225ENST00000616944 ZC3H15Q8WU90 426 aaKnown RBP17.82■□□□□ 0.44
CBWD1-225ENST00000616944 ANKS1AQ92625 1134 aa17.82■□□□□ 0.44
CBWD1-225ENST00000616944 CCDC17Q96LX7 622 aa17.82■□□□□ 0.44
CBWD1-225ENST00000616944 HPS5Q9UPZ3 1129 aa17.82■□□□□ 0.44
CBWD1-225ENST00000616944 NID2Q14112 1375 aa17.82■□□□□ 0.44
CBWD1-225ENST00000616944 OTOFQ9HC10 1997 aa17.81■□□□□ 0.44
CBWD1-225ENST00000616944 KLF18A0A0U1RQI7 1052 aa17.81■□□□□ 0.44
CBWD1-225ENST00000616944 ERICH2A1L162 156 aa17.81■□□□□ 0.44
CBWD1-225ENST00000616944 PFKFB2O60825 505 aa17.81■□□□□ 0.44
CBWD1-225ENST00000616944 PDIA3P30101 505 aaKnown RBP17.81■□□□□ 0.44
CBWD1-225ENST00000616944 TMTC2Q8N394 836 aa17.81■□□□□ 0.44
CBWD1-225ENST00000616944 RRP1BQ14684 758 aaKnown RBP17.8■□□□□ 0.44
CBWD1-225ENST00000616944 DGKHQ86XP1 1220 aa17.8■□□□□ 0.44
CBWD1-225ENST00000616944 GTF3C6Q969F1 213 aa17.8■□□□□ 0.44
CBWD1-225ENST00000616944 INTS4Q96HW7 963 aaKnown RBP17.8■□□□□ 0.44
CBWD1-225ENST00000616944 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.8■□□□□ 0.44
CBWD1-225ENST00000616944 MYH6P13533 1939 aa17.8■□□□□ 0.44
CBWD1-225ENST00000616944 RCAN1P53805 252 aa17.8■□□□□ 0.44
CBWD1-225ENST00000616944 CERKLQ49MI3 558 aaPredicted RBP17.8■□□□□ 0.44
CBWD1-225ENST00000616944 CCDC178Q5BJE1 867 aa17.8■□□□□ 0.44
CBWD1-225ENST00000616944 IFIT1BQ5T764 474 aaKnown RBP17.8■□□□□ 0.44
CBWD1-225ENST00000616944 NBPF12Q5TAG4 269 aaPredicted RBP17.8■□□□□ 0.44
CBWD1-225ENST00000616944 ZNF526Q8TF50 670 aaPredicted RBP17.8■□□□□ 0.44
CBWD1-225ENST00000616944 CEP95Q96GE4 821 aa17.8■□□□□ 0.44
CBWD1-225ENST00000616944 TRIM34Q9BYJ4 488 aa17.8■□□□□ 0.44
CBWD1-225ENST00000616944 DAXXQ9UER7 740 aaPredicted RBP17.8■□□□□ 0.44
CBWD1-225ENST00000616944 SCRN1Q12765 414 aa17.79■□□□□ 0.44
CBWD1-225ENST00000616944 SHROOM1Q2M3G4 852 aaPredicted RBP17.79■□□□□ 0.44
CBWD1-225ENST00000616944 NECAB1Q8N987 351 aa17.79■□□□□ 0.44
CBWD1-225ENST00000616944 MTMR4Q9NYA4 1195 aa17.79■□□□□ 0.44
CBWD1-225ENST00000616944 PHIPQ8WWQ0 1821 aa17.78■□□□□ 0.44
CBWD1-225ENST00000616944 GOLGA8BA8MQT2 603 aa17.78■□□□□ 0.44
CBWD1-225ENST00000616944 PHF20L1A8MW92 1017 aa17.78■□□□□ 0.44
CBWD1-225ENST00000616944 GUCY1A2P33402 732 aa17.78■□□□□ 0.44
CBWD1-225ENST00000616944 JAG1P78504 1218 aa17.78■□□□□ 0.44
CBWD1-225ENST00000616944 STK3Q13188 491 aa17.78■□□□□ 0.44
CBWD1-225ENST00000616944 MIGA2Q7L4E1 593 aa17.78■□□□□ 0.44
CBWD1-225ENST00000616944 PNMA8AQ86V59 439 aaPredicted RBP17.78■□□□□ 0.44
CBWD1-225ENST00000616944 CCDC83Q8IWF9 413 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms