RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 BICD2Q8TD16 824 aa17.47■□□□□ 0.39
NOP56-220ENST00000616692 TAF1DQ9H5J8 278 aaPredicted RBP17.47■□□□□ 0.39
NOP56-220ENST00000616692 TRPC1P48995 793 aa17.47■□□□□ 0.39
NOP56-220ENST00000616692 NYXQ9GZU5 481 aa17.47■□□□□ 0.39
NOP56-220ENST00000616692 IQSEC3Q9UPP2 1182 aaPredicted RBP17.47■□□□□ 0.39
NOP56-220ENST00000616692 CEP350Q5VT06 3117 aa17.47■□□□□ 0.39
NOP56-220ENST00000616692 LRMPQ12912 555 aa17.46■□□□□ 0.39
NOP56-220ENST00000616692 NAA25Q14CX7 972 aa17.46■□□□□ 0.39
NOP56-220ENST00000616692 ARMC9Q7Z3E5 817 aa17.46■□□□□ 0.39
NOP56-220ENST00000616692 ANKIB1Q9P2G1 1089 aa17.46■□□□□ 0.39
NOP56-220ENST00000616692 SPDYE3A6NKU9 549 aa17.46■□□□□ 0.39
NOP56-220ENST00000616692 F8VZ95 297 aa17.46■□□□□ 0.39
NOP56-220ENST00000616692 AP5Z1O43299 807 aa17.46■□□□□ 0.39
NOP56-220ENST00000616692 PKP1Q13835 747 aa17.46■□□□□ 0.39
NOP56-220ENST00000616692 ISM2Q6H9L7 571 aa17.46■□□□□ 0.39
NOP56-220ENST00000616692 PHACTR3Q96KR7 559 aa17.46■□□□□ 0.39
NOP56-220ENST00000616692 TRAIPQ9BWF2 469 aa17.46■□□□□ 0.39
NOP56-220ENST00000616692 L2HGDHQ9H9P8 463 aa17.46■□□□□ 0.39
NOP56-220ENST00000616692 ORC3Q9UBD5 711 aaPredicted RBP17.46■□□□□ 0.39
NOP56-220ENST00000616692 ABCF2Q9UG63 623 aa17.46■□□□□ 0.39
NOP56-220ENST00000616692 CYP11B2P19099 503 aa17.45■□□□□ 0.38
NOP56-220ENST00000616692 FLT3P36888 993 aa17.45■□□□□ 0.38
NOP56-220ENST00000616692 EPAS1Q99814 870 aa17.45■□□□□ 0.38
NOP56-220ENST00000616692 UTP14AQ9BVJ6 771 aaKnown RBP17.45■□□□□ 0.38
NOP56-220ENST00000616692 NACA2Q9H009 215 aa17.45■□□□□ 0.38
NOP56-220ENST00000616692 TBC1D7Q9P0N9 293 aa17.45■□□□□ 0.38
NOP56-220ENST00000616692 HACL1Q9UJ83 578 aa17.45■□□□□ 0.38
NOP56-220ENST00000616692 USP16Q9Y5T5 823 aa17.45■□□□□ 0.38
NOP56-220ENST00000616692 H3BQF6 201 aa17.45■□□□□ 0.38
NOP56-220ENST00000616692 ATP6V1G1O75348 118 aa17.45■□□□□ 0.38
NOP56-220ENST00000616692 DDNO94850 711 aaPredicted RBP17.45■□□□□ 0.38
NOP56-220ENST00000616692 MPP3Q13368 585 aa17.45■□□□□ 0.38
NOP56-220ENST00000616692 MFN1Q8IWA4 741 aa17.45■□□□□ 0.38
NOP56-220ENST00000616692 POLR3CQ9BUI4 534 aaPredicted RBP17.45■□□□□ 0.38
NOP56-220ENST00000616692 FZD9O00144 591 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 OPA1O60313 960 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 XBP1P17861 261 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 KCNB1Q14721 858 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 TAF7Q15545 349 aaPredicted RBP17.44■□□□□ 0.38
NOP56-220ENST00000616692 ARHGAP22Q7Z5H3 698 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 SAMD3Q8N6K7 520 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 DHRS1Q96LJ7 313 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 CCDC114Q96M63 670 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 VPS33BQ9H267 617 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.44■□□□□ 0.384e-9■■■■□ 19.5
NOP56-220ENST00000616692 GOLGB1Q14789 3259 aaKnown RBP17.44■□□□□ 0.38
NOP56-220ENST00000616692 SNED1Q8TER0 1413 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 RMDN2Q96LZ7 410 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 VPS18Q9P253 973 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 ZNF330Q9Y3S2 320 aaPredicted RBP17.44■□□□□ 0.38
NOP56-220ENST00000616692 TMEM88BA6NKF7 163 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 SLC27A2O14975 620 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 KCNQ3O43525 872 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 NAT2P11245 290 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 EIF4BP23588 611 aaKnown RBP17.44■□□□□ 0.38
NOP56-220ENST00000616692 CRY2Q49AN0 593 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 FAM81BQ96LP2 452 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 RTEL1Q9NZ71 1219 aa17.44■□□□□ 0.38
NOP56-220ENST00000616692 AHCYL1O43865 530 aa17.43■□□□□ 0.38
NOP56-220ENST00000616692 KIF5CO60282 957 aa17.43■□□□□ 0.38
NOP56-220ENST00000616692 PDE3AQ14432 1141 aa17.43■□□□□ 0.38
NOP56-220ENST00000616692 ZSCAN25Q6NSZ9 544 aa17.43■□□□□ 0.38
NOP56-220ENST00000616692 SDCCAG8Q86SQ7 713 aaPredicted RBP17.43■□□□□ 0.38
NOP56-220ENST00000616692 TMEM110Q86TL2 294 aa17.43■□□□□ 0.38
NOP56-220ENST00000616692 STAG2Q8N3U4 1231 aa17.43■□□□□ 0.38
NOP56-220ENST00000616692 LMBR1Q8WVP7 490 aa17.43■□□□□ 0.38
NOP56-220ENST00000616692 ITGBL1O95965 494 aaPredicted RBP17.43■□□□□ 0.38
NOP56-220ENST00000616692 HOXA10P31260 410 aaPredicted RBP17.43■□□□□ 0.38
NOP56-220ENST00000616692 CTCFP49711 727 aaPredicted RBP17.43■□□□□ 0.38
NOP56-220ENST00000616692 SESN3P58005 492 aa17.43■□□□□ 0.38
NOP56-220ENST00000616692 ATP2B2Q01814 1243 aa17.43■□□□□ 0.38
NOP56-220ENST00000616692 CC2D1AQ6P1N0 951 aaPredicted RBP17.43■□□□□ 0.38
NOP56-220ENST00000616692 TLDC1Q6P9B6 456 aa17.43■□□□□ 0.38
NOP56-220ENST00000616692 GPC2Q8N158 579 aa17.43■□□□□ 0.38
NOP56-220ENST00000616692 MAB21L3Q8N8X9 362 aa17.43■□□□□ 0.38
NOP56-220ENST00000616692 MIPOL1Q8TD10 442 aa17.43■□□□□ 0.38
NOP56-220ENST00000616692 RABL2BQ9UNT1 228 aa17.43■□□□□ 0.38
NOP56-220ENST00000616692 NIP7Q9Y221 180 aaKnown RBP eCLIP17.43■□□□□ 0.381e-323■■■□□ 17.9
NOP56-220ENST00000616692 LRRC10BA6NIK2 292 aa17.42■□□□□ 0.38
NOP56-220ENST00000616692 FESP07332 822 aa17.42■□□□□ 0.38
NOP56-220ENST00000616692 IARSP41252 1262 aaKnown RBP17.42■□□□□ 0.38
NOP56-220ENST00000616692 PSMC1P62191 440 aaKnown RBP17.42■□□□□ 0.38
NOP56-220ENST00000616692 THEMIS2Q5TEJ8 643 aa17.42■□□□□ 0.38
NOP56-220ENST00000616692 CWF19L1Q69YN2 538 aaKnown RBP17.42■□□□□ 0.38
NOP56-220ENST00000616692 MTRQ99707 1265 aa17.42■□□□□ 0.38
NOP56-220ENST00000616692 NBPF26B4DH59 902 aa17.42■□□□□ 0.38
NOP56-220ENST00000616692 MICALCLQ6ZW33 695 aa17.42■□□□□ 0.38
NOP56-220ENST00000616692 NUP133Q8WUM0 1156 aa17.42■□□□□ 0.38
NOP56-220ENST00000616692 KCNN1Q92952 543 aa17.42■□□□□ 0.38
NOP56-220ENST00000616692 MAPK8IP1Q9UQF2 711 aa17.42■□□□□ 0.38
NOP56-220ENST00000616692 CACNA1SQ13698 1873 aa17.41■□□□□ 0.38
NOP56-220ENST00000616692 KDM3BQ7LBC6 1761 aa17.41■□□□□ 0.38
NOP56-220ENST00000616692 NBPF7P0C2Y1 421 aaPredicted RBP17.41■□□□□ 0.38
NOP56-220ENST00000616692 TMED1Q13445 227 aa17.41■□□□□ 0.38
NOP56-220ENST00000616692 E2F5Q15329 346 aa17.41■□□□□ 0.38
NOP56-220ENST00000616692 CACTIN-AS1Q8N1I8 211 aa17.41■□□□□ 0.38
NOP56-220ENST00000616692 AIDAQ96BJ3 306 aa17.41■□□□□ 0.38
NOP56-220ENST00000616692 ACBD3Q9H3P7 528 aa17.41■□□□□ 0.38
NOP56-220ENST00000616692 BATF3Q9NR55 127 aa17.41■□□□□ 0.38
NOP56-220ENST00000616692 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms