RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 FAM169AQ9Y6X4 670 aa10.27□□□□□ -0.76
COL12A1-211ENST00000615798 TSPAN9O75954 239 aa10.27□□□□□ -0.76
COL12A1-211ENST00000615798 PDE1AP54750 535 aa10.27□□□□□ -0.76
COL12A1-211ENST00000615798 PPP4R4Q6NUP7 873 aa10.27□□□□□ -0.76
COL12A1-211ENST00000615798 SAMD1Q6SPF0 538 aaPredicted RBP10.27□□□□□ -0.76
COL12A1-211ENST00000615798 EXOC6BQ9Y2D4 811 aa10.27□□□□□ -0.76
COL12A1-211ENST00000615798 RIMS2Q9UQ26 1411 aa10.27□□□□□ -0.76
COL12A1-211ENST00000615798 A0A1W2PP64 1363 aa10.27□□□□□ -0.76
COL12A1-211ENST00000615798 PMS1P54277 932 aaKnown RBP10.27□□□□□ -0.76
COL12A1-211ENST00000615798 CABP4P57796 275 aa10.27□□□□□ -0.76
COL12A1-211ENST00000615798 TRIML1Q8N9V2 468 aa10.27□□□□□ -0.76
COL12A1-211ENST00000615798 OLFM3Q96PB7 478 aa10.27□□□□□ -0.76
COL12A1-211ENST00000615798 CD2APQ9Y5K6 639 aa10.27□□□□□ -0.76
COL12A1-211ENST00000615798 SAMD9LQ8IVG5 1584 aa10.27□□□□□ -0.76
COL12A1-211ENST00000615798 GOLGA8QA0A0J9YX86 632 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 GOLGA8OA6NCC3 632 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 GOLGA8NF8WBI6 632 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 ITGB1BP2Q9UKP3 347 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 ATP7BP35670 1465 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 CHMP4BP1P59074 171 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 MBD2Q9UBB5 411 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 RRS1Q15050 365 aaKnown RBP10.27□□□□□ -0.77
COL12A1-211ENST00000615798 MMS22LQ6ZRQ5 1243 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 AK9Q5TCS8 1911 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 TRPM1Q7Z4N2 1603 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 ESRRBO95718 433 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 STXBP4Q6ZWJ1 553 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 USP33Q8TEY7 942 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 GOLGA8KD6RF30 607 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 DENND2CQ68D51 928 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 CNNM3Q8NE01 707 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 CCHCR1Q8TD31 782 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 ECE1P42892 770 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 ZNF653Q96CK0 615 aa10.27□□□□□ -0.77
COL12A1-211ENST00000615798 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.26□□□□□ -0.77
COL12A1-211ENST00000615798 SYT1P21579 422 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 ATAD3BQ5T9A4 648 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 GINS4Q9BRT9 223 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 RASSF10A6NK89 507 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 ACTN4O43707 911 aaKnown RBP10.26□□□□□ -0.77
COL12A1-211ENST00000615798 A0A087WUV0 522 aaPredicted RBP10.26□□□□□ -0.77
COL12A1-211ENST00000615798 FAM71BQ8TC56 605 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 PHKBQ93100 1093 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 ESYT1Q9BSJ8 1104 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 POLR3CQ9BUI4 534 aaPredicted RBP10.26□□□□□ -0.77
COL12A1-211ENST00000615798 VPS37BQ9H9H4 285 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 MICAL3Q7RTP6 2002 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 STARD3NLO95772 234 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 XRCC6P12956 609 aaKnown RBP eCLIP10.26□□□□□ -0.77
COL12A1-211ENST00000615798 SLC44A4Q53GD3 710 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 KCNG4Q8TDN1 519 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 FGD4Q96M96 766 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 RMND1Q9NWS8 449 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 N4BP3O15049 544 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 DDIT3P35638 169 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 CFAP61Q8NHU2 1237 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.26□□□□□ -0.77
COL12A1-211ENST00000615798 EFHD1Q9BUP0 239 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 MTMR7Q9Y216 660 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 GTPBP10A4D1E9 387 aaKnown RBP10.26□□□□□ -0.77
COL12A1-211ENST00000615798 KRT6AP02538 564 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 KRT6BP04259 564 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 KRT6CP48668 564 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 CHMP6Q96FZ7 201 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 PUF60Q9UHX1 559 aaKnown RBP10.26□□□□□ -0.77
COL12A1-211ENST00000615798 ATP8B2P98198 1209 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 CUL3Q13618 768 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 TMEM266Q2M3C6 531 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 NFRKBQ6P4R8 1299 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 AATKQ6ZMQ8 1374 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 ARHGAP10A1A4S6 786 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 TTC4O95801 387 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 SERPINB10P48595 397 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 TEX9Q8N6V9 391 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 LRGUKQ96M69 825 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 ZNF229Q9UJW7 825 aa10.26□□□□□ -0.77
COL12A1-211ENST00000615798 SPAG1Q07617 926 aa10.25□□□□□ -0.77
COL12A1-211ENST00000615798 TCERG1LQ5VWI1 586 aa10.25□□□□□ -0.77
COL12A1-211ENST00000615798 MCM10Q7L590 875 aa10.25□□□□□ -0.77
COL12A1-211ENST00000615798 TMTC2Q8N394 836 aa10.25□□□□□ -0.77
COL12A1-211ENST00000615798 DCDC2Q9UHG0 476 aa10.25□□□□□ -0.77
COL12A1-211ENST00000615798 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-211ENST00000615798 TRMT2AQ8IZ69 625 aaKnown RBP10.25□□□□□ -0.77
COL12A1-211ENST00000615798 GABPB2Q8TAK5 448 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-211ENST00000615798 KLHL31Q9H511 634 aa10.25□□□□□ -0.77
COL12A1-211ENST00000615798 CWF19L2Q2TBE0 894 aaKnown RBP10.25□□□□□ -0.77
COL12A1-211ENST00000615798 MCF2L2Q86YR7 1114 aa10.25□□□□□ -0.77
COL12A1-211ENST00000615798 CKAP2LQ8IYA6 745 aa10.25□□□□□ -0.77
COL12A1-211ENST00000615798 TMX3Q96JJ7 454 aa10.25□□□□□ -0.77
COL12A1-211ENST00000615798 CDC42BPAQ5VT25 1732 aa10.25□□□□□ -0.77
COL12A1-211ENST00000615798 MAGI2Q86UL8 1455 aa10.25□□□□□ -0.77
COL12A1-211ENST00000615798 ZNF76P36508 570 aa10.25□□□□□ -0.77
COL12A1-211ENST00000615798 HDDC2Q7Z4H3 204 aa10.25□□□□□ -0.77
COL12A1-211ENST00000615798 ZNF445P59923 1031 aa10.25□□□□□ -0.77
COL12A1-211ENST00000615798 AMPD3Q01432 767 aa10.25□□□□□ -0.77
COL12A1-211ENST00000615798 NLRP9Q7RTR0 991 aa10.25□□□□□ -0.77
COL12A1-211ENST00000615798 CNGA4Q8IV77 575 aa10.25□□□□□ -0.77
COL12A1-211ENST00000615798 QKIQ96PU8 341 aaKnown RBP eCLIP10.25□□□□□ -0.77
COL12A1-211ENST00000615798 RBM27Q9P2N5 1060 aaKnown RBP10.25□□□□□ -0.77
COL12A1-211ENST00000615798 hCG_2014768A0A024R1R8 64 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms