RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CCND2P30279 289 aa10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 MCM7P33993 719 aa10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 TFAP4Q01664 338 aa10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 KRT24Q2M2I5 525 aa10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 FBXO11Q86XK2 927 aa10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 PLEKHM2Q8IWE5 1019 aa10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 FBXO40Q9UH90 709 aa10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 GOLGA6L10A0A0M3HER8 536 aa10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 CYLC1P35663 651 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 FAM193BQ96PV7 902 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 SPAG5Q96R06 1193 aa10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 BRIP1Q9BX63 1249 aa10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 KANSL2Q9H9L4 492 aa10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 DNM3Q9UQ16 869 aa10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 USP17L8P0C7I0 530 aa10.96□□□□□ -0.66
TNFRSF9-204ENST00000615230 LMAN1P49257 510 aa10.96□□□□□ -0.66
TNFRSF9-204ENST00000615230 TBC1D2Q9BYX2 928 aa10.96□□□□□ -0.66
TNFRSF9-204ENST00000615230 ZBTB21Q9ULJ3 1066 aa10.96□□□□□ -0.66
TNFRSF9-204ENST00000615230 B4E1Z4 1266 aa10.96□□□□□ -0.66
TNFRSF9-204ENST00000615230 SP8Q8IXZ3 490 aa10.96□□□□□ -0.66
TNFRSF9-204ENST00000615230 SSH3Q8TE77 659 aa10.96□□□□□ -0.66
TNFRSF9-204ENST00000615230 TMX3Q96JJ7 454 aa10.96□□□□□ -0.66
TNFRSF9-204ENST00000615230 RNF181Q9P0P0 153 aa10.96□□□□□ -0.66
TNFRSF9-204ENST00000615230 PI4KBQ9UBF8 816 aa10.96□□□□□ -0.66
TNFRSF9-204ENST00000615230 REREQ9P2R6 1566 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 GAS8O95995 478 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 ZYXQ15942 572 aaKnown RBP10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 MIER3Q7Z3K6 550 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 FCHSD1Q86WN1 690 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 GOLGA5Q8TBA6 731 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 TEKT3Q9BXF9 490 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 CCNT1O60563 726 aaKnown RBP10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 CNGA1P29973 690 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 CSRNP1Q96S65 589 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 RGS12O14924 1447 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 KIAA1210Q9ULL0 1709 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 NDC80O14777 642 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 SLC27A2O14975 620 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 FLOT1O75955 427 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 FDX1P10109 184 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 APOBRQ0VD83 1088 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 STYK1Q6J9G0 422 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 IQCDQ96DY2 449 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 DEPDC5O75140 1603 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 ZNF354CQ86Y25 554 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 FAM43AQ8N2R8 423 aa10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 ZNF215Q9UL58 517 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF9-204ENST00000615230 LETM2Q2VYF4 491 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 SYNE4Q8N205 404 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 GIMAP8Q8ND71 665 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 GABPB2Q8TAK5 448 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 MRVI1Q9Y6F6 885 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 TTLL1O95922 423 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 CASQ1P31415 396 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 YARSP54577 528 aaKnown RBP10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 TSHZ3Q63HK5 1081 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 RETREG2Q8NC44 543 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 COA7Q96BR5 231 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 MCM4P33991 863 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 CAMK4Q16566 473 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 CRAMP1Q96RY5 1269 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 ADPGKQ9BRR6 497 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 RASAL2Q9UJF2 1139 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 ELP1O95163 1332 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 SLFN13Q68D06 897 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 CEP128Q6ZU80 1094 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 FAM212AQ96EL1 285 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 TBC1D32Q96NH3 1257 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 PLEKHF1Q96S99 279 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 GREM2Q9H772 168 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 CALCRLQ16602 461 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 CPXCR1Q8N123 301 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 REXO1Q8N1G1 1221 aaKnown RBP10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 CCDC155Q8N6L0 562 aa10.94□□□□□ -0.66
TNFRSF9-204ENST00000615230 CCDC169A6NNP5 214 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 GYG1P46976 350 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 PPP2R5AQ15172 486 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 MIS18BP1Q6P0N0 1132 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 CTNNBL1Q8WYA6 563 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 CCPG1Q9ULG6 757 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 COMMD10Q9Y6G5 202 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 F13A1P00488 732 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 KIF11P52732 1056 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 CCDC14Q49A88 953 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 IFNL3Q8IZI9 196 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 GLG1Q92896 1179 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 SELENOOQ9BVL4 669 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 HACL1Q9UJ83 578 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 KIDINS220Q9ULH0 1771 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 NEXMIFQ5QGS0 1516 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 CFBP00751 764 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 IGHDP01880 384 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 NOP2P46087 812 aaKnown RBP10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 SCNN1DP51172 638 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 EN1Q05925 392 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 SPC24Q8NBT2 197 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 CCDC94Q9BW85 323 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 TRPC6Q9Y210 931 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 USP32Q8NFA0 1604 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 TUBB4AP04350 444 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms