RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 FAM110CQ1W6H9 321 aa18.02■□□□□ 0.48
PRKN-211ENST00000615065 ASCC2Q9H1I8 757 aaPredicted RBP18.02■□□□□ 0.48
PRKN-211ENST00000615065 ZBTB21Q9ULJ3 1066 aa18.02■□□□□ 0.48
PRKN-211ENST00000615065 TNPO2O14787 897 aaKnown RBP18.01■□□□□ 0.47
PRKN-211ENST00000615065 PDE6AP16499 860 aa18.01■□□□□ 0.47
PRKN-211ENST00000615065 FLT3LGP49771 235 aa18.01■□□□□ 0.47
PRKN-211ENST00000615065 BACE1P56817 501 aa18.01■□□□□ 0.47
PRKN-211ENST00000615065 PABPC4Q13310 644 aaKnown RBP eCLIP18.01■□□□□ 0.47
PRKN-211ENST00000615065 TTF1Q15361 905 aaPredicted RBP18.01■□□□□ 0.47
PRKN-211ENST00000615065 TMED8Q6PL24 325 aaPredicted RBP18.01■□□□□ 0.47
PRKN-211ENST00000615065 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.01■□□□□ 0.47
PRKN-211ENST00000615065 SHISA4Q96DD7 197 aa18.01■□□□□ 0.47
PRKN-211ENST00000615065 DNAJC2Q99543 621 aaKnown RBP18.01■□□□□ 0.47
PRKN-211ENST00000615065 RIOK1Q9BRS2 568 aaKnown RBP18.01■□□□□ 0.47
PRKN-211ENST00000615065 BIN2Q9UBW5 565 aaPredicted RBP18.01■□□□□ 0.47
PRKN-211ENST00000615065 GOLIM4O00461 696 aa18■□□□□ 0.47
PRKN-211ENST00000615065 RAB11FIP3O75154 756 aa18■□□□□ 0.47
PRKN-211ENST00000615065 CCL5P13501 91 aa18■□□□□ 0.47
PRKN-211ENST00000615065 GCLCP48506 637 aaPredicted RBP18■□□□□ 0.47
PRKN-211ENST00000615065 SLC9C2Q5TAH2 1124 aa18■□□□□ 0.47
PRKN-211ENST00000615065 SLAIN1Q8ND83 568 aa18■□□□□ 0.47
PRKN-211ENST00000615065 EDC3Q96F86 508 aaKnown RBP18■□□□□ 0.47
PRKN-211ENST00000615065 CHMP4BQ9H444 224 aaKnown RBP18■□□□□ 0.47
PRKN-211ENST00000615065 GINM1Q9NU53 330 aa18■□□□□ 0.47
PRKN-211ENST00000615065 MYH7P12883 1935 aa18■□□□□ 0.47
PRKN-211ENST00000615065 MAGEB6P1A0A0J9YX57 407 aa17.99■□□□□ 0.47
PRKN-211ENST00000615065 ADCY3O60266 1144 aa17.99■□□□□ 0.47
PRKN-211ENST00000615065 GH2P01242 217 aa17.99■□□□□ 0.47
PRKN-211ENST00000615065 ELNP15502 786 aa17.99■□□□□ 0.47
PRKN-211ENST00000615065 TMOD4Q9NZQ9 345 aa17.99■□□□□ 0.47
PRKN-211ENST00000615065 SERPINB13Q9UIV8 391 aa17.99■□□□□ 0.47
PRKN-211ENST00000615065 PLXNB2O15031 1838 aa17.99■□□□□ 0.47
PRKN-211ENST00000615065 ZNF532Q9HCE3 1301 aa17.98■□□□□ 0.47
PRKN-211ENST00000615065 USP17L10C9JJH3 530 aa17.98■□□□□ 0.47
PRKN-211ENST00000615065 UBXN2AP68543 259 aa17.98■□□□□ 0.47
PRKN-211ENST00000615065 IRX3P78415 501 aaPredicted RBP17.98■□□□□ 0.47
PRKN-211ENST00000615065 PDE3AQ14432 1141 aa17.98■□□□□ 0.47
PRKN-211ENST00000615065 TATDN1Q6P1N9 297 aa17.98■□□□□ 0.47
PRKN-211ENST00000615065 COA7Q96BR5 231 aa17.98■□□□□ 0.47
PRKN-211ENST00000615065 RNF208Q9H0X6 261 aa17.98■□□□□ 0.47
PRKN-211ENST00000615065 EHD4Q9H223 541 aa17.98■□□□□ 0.47
PRKN-211ENST00000615065 TCRBV5S4A2TA0A5A2 114 aa17.97■□□□□ 0.47
PRKN-211ENST00000615065 C19orf81C9J6K1 198 aa17.97■□□□□ 0.47
PRKN-211ENST00000615065 HOXA7P31268 230 aaPredicted RBP17.97■□□□□ 0.47
PRKN-211ENST00000615065 PLCD1P51178 756 aa17.97■□□□□ 0.47
PRKN-211ENST00000615065 IRF5Q13568 498 aa17.97■□□□□ 0.47
PRKN-211ENST00000615065 TTC6Q86TZ1 520 aa17.97■□□□□ 0.47
PRKN-211ENST00000615065 P2RX7Q99572 595 aaKnown RBP17.97■□□□□ 0.47
PRKN-211ENST00000615065 UNC93B1Q9H1C4 597 aa17.97■□□□□ 0.47
PRKN-211ENST00000615065 BOLA2Q9H3K6 86 aa17.97■□□□□ 0.47
PRKN-211ENST00000615065 TAOK2Q9UL54 1235 aa17.97■□□□□ 0.47
PRKN-211ENST00000615065 MYH8P13535 1937 aa17.96■□□□□ 0.47
PRKN-211ENST00000615065 BAZ2AQ9UIF9 1905 aaKnown RBP17.96■□□□□ 0.47
PRKN-211ENST00000615065 PEX10O60683 326 aa17.96■□□□□ 0.47
PRKN-211ENST00000615065 INHAP05111 366 aa17.96■□□□□ 0.47
PRKN-211ENST00000615065 GJB1P08034 283 aa17.96■□□□□ 0.47
PRKN-211ENST00000615065 GJA8P48165 433 aa17.96■□□□□ 0.47
PRKN-211ENST00000615065 EVX2Q03828 476 aa17.96■□□□□ 0.47
PRKN-211ENST00000615065 LCORLQ8N3X6 602 aa17.96■□□□□ 0.47
PRKN-211ENST00000615065 PXYLP1Q8TE99 480 aa17.96■□□□□ 0.47
PRKN-211ENST00000615065 CRNKL1Q9BZJ0 848 aaKnown RBP17.96■□□□□ 0.47
PRKN-211ENST00000615065 EMILIN3Q9NT22 766 aa17.96■□□□□ 0.47
PRKN-211ENST00000615065 PAG1Q9NWQ8 432 aa17.96■□□□□ 0.47
PRKN-211ENST00000615065 MORF4L1Q9UBU8 362 aa17.96■□□□□ 0.47
PRKN-211ENST00000615065 POLR3DP05423 398 aaPredicted RBP17.95■□□□□ 0.46
PRKN-211ENST00000615065 ATP5JP18859 108 aa17.95■□□□□ 0.46
PRKN-211ENST00000615065 SHMT1P34896 483 aa17.95■□□□□ 0.46
PRKN-211ENST00000615065 HERVK_113P62684 666 aa17.95■□□□□ 0.46
PRKN-211ENST00000615065 RAB3GAP1Q15042 981 aa17.95■□□□□ 0.46
PRKN-211ENST00000615065 SLFNL1Q499Z3 407 aa17.95■□□□□ 0.46
PRKN-211ENST00000615065 CERKLQ49MI3 558 aaPredicted RBP17.95■□□□□ 0.46
PRKN-211ENST00000615065 NKX2-3Q8TAU0 364 aa17.95■□□□□ 0.46
PRKN-211ENST00000615065 SDR42E1Q8WUS8 393 aa17.95■□□□□ 0.46
PRKN-211ENST00000615065 TXNRD2Q9NNW7 524 aa17.95■□□□□ 0.46
PRKN-211ENST00000615065 SMARCA5O60264 1052 aaPredicted RBP17.94■□□□□ 0.46
PRKN-211ENST00000615065 GABPAQ06546 454 aa17.94■□□□□ 0.46
PRKN-211ENST00000615065 ZYXQ15942 572 aaKnown RBP17.94■□□□□ 0.46
PRKN-211ENST00000615065 ABCB5Q2M3G0 1257 aa17.94■□□□□ 0.46
PRKN-211ENST00000615065 USP17L2Q6R6M4 530 aa17.94■□□□□ 0.46
PRKN-211ENST00000615065 FEZ1Q99689 392 aa17.94■□□□□ 0.46
PRKN-211ENST00000615065 HAUS7Q99871 368 aa17.94■□□□□ 0.46
PRKN-211ENST00000615065 LRRCC1Q9C099 1032 aa17.94■□□□□ 0.46
PRKN-211ENST00000615065 MCM9Q9NXL9 1143 aa17.94■□□□□ 0.46
PRKN-211ENST00000615065 CHGBP05060 677 aa17.93■□□□□ 0.46
PRKN-211ENST00000615065 ADD2P35612 726 aa17.93■□□□□ 0.46
PRKN-211ENST00000615065 U2AF1L4Q8WU68 220 aaKnown RBP17.93■□□□□ 0.46
PRKN-211ENST00000615065 ARMT1Q9H993 441 aa17.93■□□□□ 0.46
PRKN-211ENST00000615065 DCP1AQ9NPI6 582 aaPredicted RBP17.93■□□□□ 0.46
PRKN-211ENST00000615065 GJD2Q9UKL4 321 aa17.93■□□□□ 0.46
PRKN-211ENST00000615065 CYP2D6P10635 497 aa17.92■□□□□ 0.46
PRKN-211ENST00000615065 GUCY1A2P33402 732 aa17.92■□□□□ 0.46
PRKN-211ENST00000615065 POTEEQ6S8J3 1075 aa17.92■□□□□ 0.46
PRKN-211ENST00000615065 UBE2Q1Q7Z7E8 422 aa17.92■□□□□ 0.46
PRKN-211ENST00000615065 ACER1Q8TDN7 264 aa17.92■□□□□ 0.46
PRKN-211ENST00000615065 GCC1Q96CN9 775 aa17.92■□□□□ 0.46
PRKN-211ENST00000615065 C12orf42Q96LP6 360 aa17.92■□□□□ 0.46
PRKN-211ENST00000615065 PRKAB2O43741 272 aa17.91■□□□□ 0.46
PRKN-211ENST00000615065 MBD4O95243 580 aa17.91■□□□□ 0.46
PRKN-211ENST00000615065 GPRC5AQ8NFJ5 357 aa17.91■□□□□ 0.46
PRKN-211ENST00000615065 PAGR1Q9BTK6 254 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms