RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 TTLL6Q8N841 843 aa11.52□□□□□ -0.57
GGA3-221ENST00000614198 IGDCC4Q8TDY8 1250 aa11.52□□□□□ -0.57
GGA3-221ENST00000614198 PHKBQ93100 1093 aa11.52□□□□□ -0.57
GGA3-221ENST00000614198 TSPYL1Q9H0U9 437 aa11.52□□□□□ -0.57
GGA3-221ENST00000614198 DDX4Q9NQI0 724 aaKnown RBP11.52□□□□□ -0.57
GGA3-221ENST00000614198 GOLGA8BA8MQT2 603 aa11.51□□□□□ -0.57
GGA3-221ENST00000614198 AP5Z1O43299 807 aa11.51□□□□□ -0.57
GGA3-221ENST00000614198 CAPN2P17655 700 aa11.51□□□□□ -0.57
GGA3-221ENST00000614198 TCP10Q12799 353 aa11.51□□□□□ -0.57
GGA3-221ENST00000614198 NFIAQ12857 509 aa11.51□□□□□ -0.57
GGA3-221ENST00000614198 TRDNQ13061 729 aa11.51□□□□□ -0.57
GGA3-221ENST00000614198 FUCA2Q9BTY2 467 aa11.51□□□□□ -0.57
GGA3-221ENST00000614198 NACAP1Q9BZK3 213 aa11.51□□□□□ -0.57
GGA3-221ENST00000614198 TMX4Q9H1E5 349 aaPredicted RBP11.51□□□□□ -0.57
GGA3-221ENST00000614198 DAGLAQ9Y4D2 1042 aa11.51□□□□□ -0.57
GGA3-221ENST00000614198 PAXBP1Q9Y5B6 917 aa11.51□□□□□ -0.57
GGA3-221ENST00000614198 RBM5P52756 815 aaKnown RBP eCLIP11.51□□□□□ -0.575e-10■■■■□ 19.6
GGA3-221ENST00000614198 CLEC10AQ8IUN9 316 aa11.51□□□□□ -0.57
GGA3-221ENST00000614198 CNPY2Q9Y2B0 182 aa11.51□□□□□ -0.57
GGA3-221ENST00000614198 IFIT3O14879 490 aaKnown RBP11.51□□□□□ -0.57
GGA3-221ENST00000614198 TMEM67Q5HYA8 995 aa11.51□□□□□ -0.57
GGA3-221ENST00000614198 C15orf52Q6ZUT6 534 aaKnown RBP11.51□□□□□ -0.57
GGA3-221ENST00000614198 COA1Q9GZY4 146 aa11.51□□□□□ -0.57
GGA3-221ENST00000614198 LY9Q9HBG7 655 aa11.51□□□□□ -0.57
GGA3-221ENST00000614198 MROH7-TTC4A0A0A0MT08 1334 aa11.51□□□□□ -0.57
GGA3-221ENST00000614198 WDR33Q9C0J8 1336 aaKnown RBP11.51□□□□□ -0.57
GGA3-221ENST00000614198 RHBDL3P58872 404 aa11.5□□□□□ -0.57
GGA3-221ENST00000614198 CNKSR1Q969H4 720 aa11.5□□□□□ -0.57
GGA3-221ENST00000614198 BCS1LQ9Y276 419 aa11.5□□□□□ -0.57
GGA3-221ENST00000614198 STX6O43752 255 aa11.5□□□□□ -0.57
GGA3-221ENST00000614198 FDPSP14324 419 aaKnown RBP11.5□□□□□ -0.57
GGA3-221ENST00000614198 LARP1BQ659C4 914 aaKnown RBP11.5□□□□□ -0.57
GGA3-221ENST00000614198 NFXL1Q6ZNB6 911 aa11.5□□□□□ -0.57
GGA3-221ENST00000614198 C10orf71Q711Q0 1435 aa11.5□□□□□ -0.57
GGA3-221ENST00000614198 USP17L3A6NCW0 530 aa11.5□□□□□ -0.57
GGA3-221ENST00000614198 USP17L4A6NCW7 530 aa11.5□□□□□ -0.57
GGA3-221ENST00000614198 USP17L1Q7RTZ2 530 aa11.5□□□□□ -0.57
GGA3-221ENST00000614198 TEX11Q8IYF3 940 aa11.5□□□□□ -0.57
GGA3-221ENST00000614198 NSUN7Q8NE18 718 aaKnown RBP11.5□□□□□ -0.57
GGA3-221ENST00000614198 NUP133Q8WUM0 1156 aa11.5□□□□□ -0.57
GGA3-221ENST00000614198 TRIM34Q9BYJ4 488 aa11.5□□□□□ -0.57
GGA3-221ENST00000614198 CRNKL1Q9BZJ0 848 aaKnown RBP11.5□□□□□ -0.57
GGA3-221ENST00000614198 FTOQ9C0B1 505 aaKnown RBP eCLIP11.5□□□□□ -0.57
GGA3-221ENST00000614198 MKRN1Q9UHC7 482 aaKnown RBP11.5□□□□□ -0.57
GGA3-221ENST00000614198 PTPDC1A2A3K4 754 aa11.49□□□□□ -0.57
GGA3-221ENST00000614198 GOLGA6L4A6NEF3 574 aa11.49□□□□□ -0.57
GGA3-221ENST00000614198 SH2B2O14492 632 aaPredicted RBP11.49□□□□□ -0.57
GGA3-221ENST00000614198 PRELPP51888 382 aa11.49□□□□□ -0.57
GGA3-221ENST00000614198 ALX1Q15699 326 aa11.49□□□□□ -0.57
GGA3-221ENST00000614198 ILDR2Q71H61 639 aa11.49□□□□□ -0.57
GGA3-221ENST00000614198 CCDC112Q8NEF3 446 aa11.49□□□□□ -0.57
GGA3-221ENST00000614198 ZNF397Q8NF99 534 aaPredicted RBP11.49□□□□□ -0.57
GGA3-221ENST00000614198 AGXT2Q9BYV1 514 aa11.49□□□□□ -0.57
GGA3-221ENST00000614198 MTMR6Q9Y217 621 aa11.49□□□□□ -0.57
GGA3-221ENST00000614198 GNAT2P19087 354 aa11.49□□□□□ -0.57
GGA3-221ENST00000614198 UBE2HP62256 183 aa11.49□□□□□ -0.57
GGA3-221ENST00000614198 RASSF7Q02833 373 aa11.49□□□□□ -0.57
GGA3-221ENST00000614198 SPTY2D1Q68D10 685 aaPredicted RBP11.49□□□□□ -0.57
GGA3-221ENST00000614198 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.49□□□□□ -0.57
GGA3-221ENST00000614198 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.49□□□□□ -0.57
GGA3-221ENST00000614198 V9GYY5 206 aaPredicted RBP11.49□□□□□ -0.57
GGA3-221ENST00000614198 SALL1Q9NSC2 1324 aa11.49□□□□□ -0.57
GGA3-221ENST00000614198 CDK5RAP2Q96SN8 1893 aa11.48□□□□□ -0.57
GGA3-221ENST00000614198 PFKFB2O60825 505 aa11.48□□□□□ -0.57
GGA3-221ENST00000614198 HMGB1P09429 215 aaKnown RBP11.48□□□□□ -0.57
GGA3-221ENST00000614198 PTGER2P43116 358 aa11.48□□□□□ -0.57
GGA3-221ENST00000614198 CEBPZQ03701 1054 aaKnown RBP11.48□□□□□ -0.57
GGA3-221ENST00000614198 ANKRD1Q15327 319 aa11.48□□□□□ -0.57
GGA3-221ENST00000614198 CAMK4Q16566 473 aa11.48□□□□□ -0.57
GGA3-221ENST00000614198 STAG1Q8WVM7 1258 aa11.48□□□□□ -0.57
GGA3-221ENST00000614198 ZSCAN31Q96LW9 406 aaPredicted RBP11.48□□□□□ -0.57
GGA3-221ENST00000614198 SH2B1Q9NRF2 756 aaPredicted RBP11.48□□□□□ -0.57
GGA3-221ENST00000614198 ANGEL1Q9UNK9 670 aaKnown RBP11.48□□□□□ -0.57
GGA3-221ENST00000614198 SNED1Q8TER0 1413 aa11.48□□□□□ -0.57
GGA3-221ENST00000614198 DNM1Q05193 864 aaKnown RBP11.48□□□□□ -0.57
GGA3-221ENST00000614198 NAA30Q147X3 362 aaPredicted RBP11.48□□□□□ -0.57
GGA3-221ENST00000614198 DACT2Q5SW24 774 aa11.48□□□□□ -0.57
GGA3-221ENST00000614198 TFIP11Q9UBB9 837 aaKnown RBP11.48□□□□□ -0.57
GGA3-221ENST00000614198 TNKSO95271 1327 aa11.48□□□□□ -0.57
GGA3-221ENST00000614198 FLT1P17948 1338 aa11.48□□□□□ -0.57
GGA3-221ENST00000614198 TNNT1P13805 278 aa11.48□□□□□ -0.57
GGA3-221ENST00000614198 PTGS1P23219 599 aa11.48□□□□□ -0.57
GGA3-221ENST00000614198 GUCY1A2P33402 732 aa11.48□□□□□ -0.57
GGA3-221ENST00000614198 EIF6P56537 245 aaKnown RBP11.48□□□□□ -0.57
GGA3-221ENST00000614198 APOA5Q6Q788 366 aa11.48□□□□□ -0.57
GGA3-221ENST00000614198 LARGE2Q8N3Y3 721 aa11.48□□□□□ -0.57
GGA3-221ENST00000614198 ENAHQ8N8S7 591 aaPredicted RBP11.48□□□□□ -0.57
GGA3-221ENST00000614198 MTFR1LQ9H019 292 aa11.48□□□□□ -0.57
GGA3-221ENST00000614198 FAM217BQ9NTX9 383 aaPredicted RBP11.48□□□□□ -0.57
GGA3-221ENST00000614198 GPR75-ASB3A0A0A6YYF3 556 aa11.47□□□□□ -0.57
GGA3-221ENST00000614198 EGFRP00533 1210 aa11.47□□□□□ -0.57
GGA3-221ENST00000614198 APOBEC3HQ6NTF7 200 aaKnown RBP11.47□□□□□ -0.57
GGA3-221ENST00000614198 CDAN1Q8IWY9 1227 aa11.47□□□□□ -0.57
GGA3-221ENST00000614198 CPVLQ9H3G5 476 aa11.47□□□□□ -0.57
GGA3-221ENST00000614198 USP40Q9NVE5 1235 aa11.47□□□□□ -0.57
GGA3-221ENST00000614198 PDS5AQ29RF7 1337 aaKnown RBP11.47□□□□□ -0.57
GGA3-221ENST00000614198 FAM205AQ6ZU69 1335 aa11.47□□□□□ -0.57
GGA3-221ENST00000614198 POLR3DP05423 398 aaPredicted RBP11.47□□□□□ -0.57
GGA3-221ENST00000614198 KMT5BQ4FZB7 885 aa11.47□□□□□ -0.57
GGA3-221ENST00000614198 CDC42EP5Q6NZY7 148 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms