RNA–Protein interactions for RNA: ENST00000613922.1

CCL3-204, Transcript of C-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-204ENST00000613922 GDF11O95390 407 aa20.8■□□□□ 0.92
CCL3-204ENST00000613922 ATP5JP18859 108 aa20.8■□□□□ 0.92
CCL3-204ENST00000613922 SHROOM1Q2M3G4 852 aaPredicted RBP20.8■□□□□ 0.92
CCL3-204ENST00000613922 TATDN1Q6P1N9 297 aa20.8■□□□□ 0.92
CCL3-204ENST00000613922 SMCR8Q8TEV9 937 aaPredicted RBP20.8■□□□□ 0.92
CCL3-204ENST00000613922 SH3TC2Q8TF17 1288 aa20.8■□□□□ 0.92
CCL3-204ENST00000613922 TMEM106CQ9BVX2 250 aa20.8■□□□□ 0.92
CCL3-204ENST00000613922 ZBTB21Q9ULJ3 1066 aa20.8■□□□□ 0.92
CCL3-204ENST00000613922 ZNF532Q9HCE3 1301 aa20.79■□□□□ 0.92
CCL3-204ENST00000613922 BACE1P56817 501 aa20.79■□□□□ 0.92
CCL3-204ENST00000613922 PABPC4Q13310 644 aaKnown RBP eCLIP20.79■□□□□ 0.92
CCL3-204ENST00000613922 TTC6Q86TZ1 520 aa20.79■□□□□ 0.92
CCL3-204ENST00000613922 EDC3Q96F86 508 aaKnown RBP20.79■□□□□ 0.92
CCL3-204ENST00000613922 HAUS7Q99871 368 aa20.79■□□□□ 0.92
CCL3-204ENST00000613922 LRRCC1Q9C099 1032 aa20.79■□□□□ 0.92
CCL3-204ENST00000613922 BOLA2Q9H3K6 86 aa20.79■□□□□ 0.92
CCL3-204ENST00000613922 PAG1Q9NWQ8 432 aa20.79■□□□□ 0.92
CCL3-204ENST00000613922 SERPINB13Q9UIV8 391 aa20.79■□□□□ 0.92
CCL3-204ENST00000613922 EN2P19622 333 aaPredicted RBP20.78■□□□□ 0.92
CCL3-204ENST00000613922 PRKCZQ05513 592 aa20.78■□□□□ 0.92
CCL3-204ENST00000613922 MTMR2Q13614 643 aa20.78■□□□□ 0.92
CCL3-204ENST00000613922 FAM110CQ1W6H9 321 aa20.78■□□□□ 0.92
CCL3-204ENST00000613922 SLC4A8Q2Y0W8 1093 aa20.78■□□□□ 0.92
CCL3-204ENST00000613922 RAET1EQ8TD07 263 aa20.78■□□□□ 0.92
CCL3-204ENST00000613922 MYH8P13535 1937 aa20.78■□□□□ 0.92
CCL3-204ENST00000613922 BAZ2AQ9UIF9 1905 aaKnown RBP20.78■□□□□ 0.92
CCL3-204ENST00000613922 C19orf81C9J6K1 198 aa20.77■□□□□ 0.92
CCL3-204ENST00000613922 ANKRD13CQ8N6S4 541 aa20.77■□□□□ 0.92
CCL3-204ENST00000613922 CRNKL1Q9BZJ0 848 aaKnown RBP20.77■□□□□ 0.92
CCL3-204ENST00000613922 BCL11AQ9H165 835 aa20.77■□□□□ 0.92
CCL3-204ENST00000613922 ASCC2Q9H1I8 757 aaPredicted RBP20.77■□□□□ 0.92
CCL3-204ENST00000613922 USP17L10C9JJH3 530 aa20.76■□□□□ 0.91
CCL3-204ENST00000613922 SMARCA5O60264 1052 aaPredicted RBP20.76■□□□□ 0.91
CCL3-204ENST00000613922 HOXA7P31268 230 aaPredicted RBP20.76■□□□□ 0.91
CCL3-204ENST00000613922 GRK4P32298 578 aa20.76■□□□□ 0.91
CCL3-204ENST00000613922 ADD2P35612 726 aa20.76■□□□□ 0.91
CCL3-204ENST00000613922 GCLCP48506 637 aaPredicted RBP20.76■□□□□ 0.91
CCL3-204ENST00000613922 PLCD1P51178 756 aa20.76■□□□□ 0.91
CCL3-204ENST00000613922 DCTPP1Q9H773 170 aa20.76■□□□□ 0.91
CCL3-204ENST00000613922 TMOD4Q9NZQ9 345 aa20.76■□□□□ 0.91
CCL3-204ENST00000613922 GABRQQ9UN88 632 aa20.76■□□□□ 0.91
CCL3-204ENST00000613922 GH2P01242 217 aa20.75■□□□□ 0.91
CCL3-204ENST00000613922 PRPF38BQ5VTL8 546 aaKnown RBP20.75■□□□□ 0.91
CCL3-204ENST00000613922 LCORLQ8N3X6 602 aa20.75■□□□□ 0.91
CCL3-204ENST00000613922 SHMT1P34896 483 aa20.74■□□□□ 0.91
CCL3-204ENST00000613922 GABPAQ06546 454 aa20.74■□□□□ 0.91
CCL3-204ENST00000613922 PLXNB2O15031 1838 aa20.74■□□□□ 0.91
CCL3-204ENST00000613922 TNPO2O14787 897 aaKnown RBP20.73■□□□□ 0.91
CCL3-204ENST00000613922 MYCP01106 439 aaPredicted RBP20.73■□□□□ 0.91
CCL3-204ENST00000613922 POLR3DP05423 398 aaPredicted RBP20.73■□□□□ 0.91
CCL3-204ENST00000613922 IRF5Q13568 498 aa20.73■□□□□ 0.91
CCL3-204ENST00000613922 MTFR1Q15390 333 aa20.73■□□□□ 0.91
CCL3-204ENST00000613922 CERKLQ49MI3 558 aaPredicted RBP20.73■□□□□ 0.91
CCL3-204ENST00000613922 SLAIN1Q8ND83 568 aa20.73■□□□□ 0.91
CCL3-204ENST00000613922 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.73■□□□□ 0.91
CCL3-204ENST00000613922 DCP1AQ9NPI6 582 aaPredicted RBP20.73■□□□□ 0.91
CCL3-204ENST00000613922 FLT3LGP49771 235 aa20.72■□□□□ 0.91
CCL3-204ENST00000613922 IRX3P78415 501 aaPredicted RBP20.72■□□□□ 0.91
CCL3-204ENST00000613922 UBE3CQ15386 1083 aa20.72■□□□□ 0.91
CCL3-204ENST00000613922 SLFNL1Q499Z3 407 aa20.72■□□□□ 0.91
CCL3-204ENST00000613922 USP17L2Q6R6M4 530 aa20.72■□□□□ 0.91
CCL3-204ENST00000613922 SDR42E1Q8WUS8 393 aa20.72■□□□□ 0.91
CCL3-204ENST00000613922 EMILIN3Q9NT22 766 aa20.72■□□□□ 0.91
CCL3-204ENST00000613922 MCM9Q9NXL9 1143 aa20.72■□□□□ 0.91
CCL3-204ENST00000613922 MORF4L1Q9UBU8 362 aa20.72■□□□□ 0.91
CCL3-204ENST00000613922 EVX2Q03828 476 aa20.71■□□□□ 0.91
CCL3-204ENST00000613922 ABCB5Q2M3G0 1257 aa20.71■□□□□ 0.91
CCL3-204ENST00000613922 PXYLP1Q8TE99 480 aa20.71■□□□□ 0.91
CCL3-204ENST00000613922 C12orf42Q96LP6 360 aa20.71■□□□□ 0.91
CCL3-204ENST00000613922 P2RX7Q99572 595 aaKnown RBP20.71■□□□□ 0.91
CCL3-204ENST00000613922 ARMT1Q9H993 441 aa20.71■□□□□ 0.91
CCL3-204ENST00000613922 ECHDC1Q9NTX5 307 aa20.71■□□□□ 0.91
CCL3-204ENST00000613922 ADCY3O60266 1144 aa20.7■□□□□ 0.9
CCL3-204ENST00000613922 MBD4O95243 580 aa20.7■□□□□ 0.9
CCL3-204ENST00000613922 GUCY1A2P33402 732 aa20.7■□□□□ 0.9
CCL3-204ENST00000613922 COA7Q96BR5 231 aa20.7■□□□□ 0.9
CCL3-204ENST00000613922 CABP5Q9NP86 173 aa20.7■□□□□ 0.9
CCL3-204ENST00000613922 ATP8A2Q9NTI2 1148 aa20.7■□□□□ 0.9
CCL3-204ENST00000613922 TAOK2Q9UL54 1235 aa20.7■□□□□ 0.9
CCL3-204ENST00000613922 PCDHB15Q9Y5E8 787 aa20.7■□□□□ 0.9
CCL3-204ENST00000613922 CEP290O15078 2479 aa20.7■□□□□ 0.9
CCL3-204ENST00000613922 PRKAB2O43741 272 aa20.69■□□□□ 0.9
CCL3-204ENST00000613922 CHGBP05060 677 aa20.69■□□□□ 0.9
CCL3-204ENST00000613922 RRP1P56182 461 aaKnown RBP20.69■□□□□ 0.9
CCL3-204ENST00000613922 HERVK_113P62684 666 aa20.69■□□□□ 0.9
CCL3-204ENST00000613922 UBXN2AP68543 259 aa20.69■□□□□ 0.9
CCL3-204ENST00000613922 KIAA1683Q9H0B3 1180 aa20.69■□□□□ 0.9
CCL3-204ENST00000613922 CYP2D6P10635 497 aa20.68■□□□□ 0.9
CCL3-204ENST00000613922 CCL5P13501 91 aa20.68■□□□□ 0.9
CCL3-204ENST00000613922 RAB3GAP1Q15042 981 aa20.68■□□□□ 0.9
CCL3-204ENST00000613922 ZSCAN25Q6NSZ9 544 aa20.68■□□□□ 0.9
CCL3-204ENST00000613922 ACER1Q8TDN7 264 aa20.68■□□□□ 0.9
CCL3-204ENST00000613922 GTF3C2Q8WUA4 911 aaPredicted RBP20.68■□□□□ 0.9
CCL3-204ENST00000613922 SHISA4Q96DD7 197 aa20.68■□□□□ 0.9
CCL3-204ENST00000613922 FEZ1Q99689 392 aa20.68■□□□□ 0.9
CCL3-204ENST00000613922 BIN2Q9UBW5 565 aaPredicted RBP20.68■□□□□ 0.9
CCL3-204ENST00000613922 GJB1P08034 283 aa20.67■□□□□ 0.9
CCL3-204ENST00000613922 ELNP15502 786 aa20.67■□□□□ 0.9
CCL3-204ENST00000613922 USP14P54578 494 aa20.67■□□□□ 0.9
CCL3-204ENST00000613922 NKX2-3Q8TAU0 364 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms