RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 KDM4AO75164 1064 aa17.36■□□□□ 0.37
CD48-203ENST00000613788 TSPY3P0CV98 308 aa17.36■□□□□ 0.37
CD48-203ENST00000613788 TSPY8P0CW00 308 aa17.36■□□□□ 0.37
CD48-203ENST00000613788 FKBP1BP68106 108 aa17.36■□□□□ 0.37
CD48-203ENST00000613788 TFAP4Q01664 338 aa17.36■□□□□ 0.37
CD48-203ENST00000613788 FSTL1Q12841 308 aa17.36■□□□□ 0.37
CD48-203ENST00000613788 PRKG1Q13976 671 aa17.36■□□□□ 0.37
CD48-203ENST00000613788 KLRG1Q96E93 195 aa17.36■□□□□ 0.37
CD48-203ENST00000613788 CABP5Q9NP86 173 aa17.36■□□□□ 0.37
CD48-203ENST00000613788 MPHOSPH10O00566 681 aaKnown RBP17.35■□□□□ 0.37
CD48-203ENST00000613788 CTNND1O60716 968 aaKnown RBP17.35■□□□□ 0.37
CD48-203ENST00000613788 CELF2O95319 508 aaKnown RBP17.35■□□□□ 0.37
CD48-203ENST00000613788 MCM5P33992 734 aa17.35■□□□□ 0.37
CD48-203ENST00000613788 CAP2P40123 477 aa17.35■□□□□ 0.37
CD48-203ENST00000613788 MAP3K11Q16584 847 aa17.35■□□□□ 0.37
CD48-203ENST00000613788 ABCB5Q2M3G0 1257 aa17.35■□□□□ 0.37
CD48-203ENST00000613788 BLOC1S2Q6QNY1 142 aa17.35■□□□□ 0.37
CD48-203ENST00000613788 C2orf69Q8N8R5 385 aa17.35■□□□□ 0.37
CD48-203ENST00000613788 WRNIP1Q96S55 665 aa17.35■□□□□ 0.37
CD48-203ENST00000613788 GINM1Q9NU53 330 aa17.35■□□□□ 0.37
CD48-203ENST00000613788 ZSWIM5Q9P217 1185 aa17.35■□□□□ 0.37
CD48-203ENST00000613788 ANGEL1Q9UNK9 670 aaKnown RBP17.35■□□□□ 0.37
CD48-203ENST00000613788 SSC5DA1L4H1 1573 aa17.35■□□□□ 0.37
CD48-203ENST00000613788 SIPA1L1O43166 1804 aa17.34■□□□□ 0.37
CD48-203ENST00000613788 CASTP20810 708 aaKnown RBP17.34■□□□□ 0.37
CD48-203ENST00000613788 MAP3K9P80192 1104 aa17.34■□□□□ 0.37
CD48-203ENST00000613788 FMR1Q06787 632 aaKnown RBP eCLIP17.34■□□□□ 0.37
CD48-203ENST00000613788 CCDC178Q5BJE1 867 aa17.34■□□□□ 0.37
CD48-203ENST00000613788 FAM47AQ5JRC9 791 aa17.34■□□□□ 0.37
CD48-203ENST00000613788 DHX32Q7L7V1 743 aaKnown RBP17.34■□□□□ 0.37
CD48-203ENST00000613788 IQCA1Q86XH1 822 aa17.34■□□□□ 0.37
CD48-203ENST00000613788 MB21D2Q8IYB1 491 aaPredicted RBP17.34■□□□□ 0.37
CD48-203ENST00000613788 NEDD1Q8NHV4 660 aa17.34■□□□□ 0.37
CD48-203ENST00000613788 ZSWIM6Q9HCJ5 1215 aa17.34■□□□□ 0.37
CD48-203ENST00000613788 CYP46A1Q9Y6A2 500 aa17.34■□□□□ 0.37
CD48-203ENST00000613788 ASNSP08243 561 aa17.33■□□□□ 0.37
CD48-203ENST00000613788 AKR1B1P15121 316 aa17.33■□□□□ 0.37
CD48-203ENST00000613788 PPP4R3BQ5MIZ7 849 aa17.33■□□□□ 0.37
CD48-203ENST00000613788 TMEM179Q6ZVK1 233 aa17.33■□□□□ 0.37
CD48-203ENST00000613788 RUFY3Q7L099 469 aa17.33■□□□□ 0.37
CD48-203ENST00000613788 IL27Q8NEV9 243 aa17.33■□□□□ 0.37
CD48-203ENST00000613788 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.33■□□□□ 0.37
CD48-203ENST00000613788 GBA2Q9HCG7 927 aaPredicted RBP17.33■□□□□ 0.37
CD48-203ENST00000613788 TCP11L1Q9NUJ3 509 aa17.33■□□□□ 0.37
CD48-203ENST00000613788 FZD1Q9UP38 647 aa17.33■□□□□ 0.37
CD48-203ENST00000613788 UNCXA6NJT0 531 aa17.32■□□□□ 0.36
CD48-203ENST00000613788 GDF11O95390 407 aa17.32■□□□□ 0.36
CD48-203ENST00000613788 RRP1BQ14684 758 aaKnown RBP17.32■□□□□ 0.36
CD48-203ENST00000613788 SART3Q15020 963 aaKnown RBP17.32■□□□□ 0.36
CD48-203ENST00000613788 ANKRD13AQ8IZ07 590 aa17.32■□□□□ 0.36
CD48-203ENST00000613788 KIF2CQ99661 725 aa17.32■□□□□ 0.36
CD48-203ENST00000613788 UBAC1Q9BSL1 405 aa17.32■□□□□ 0.36
CD48-203ENST00000613788 MTA3Q9BTC8 594 aa17.32■□□□□ 0.36
CD48-203ENST00000613788 CSADQ9Y600 493 aa17.32■□□□□ 0.36
CD48-203ENST00000613788 PASKQ96RG2 1323 aa17.32■□□□□ 0.36
CD48-203ENST00000613788 ERICH2A1L162 156 aa17.31■□□□□ 0.36
CD48-203ENST00000613788 PRC1O43663 620 aa17.31■□□□□ 0.36
CD48-203ENST00000613788 GH2P01242 217 aa17.31■□□□□ 0.36
CD48-203ENST00000613788 RPS6KB1P23443 525 aa17.31■□□□□ 0.36
CD48-203ENST00000613788 INPP5BP32019 993 aa17.31■□□□□ 0.36
CD48-203ENST00000613788 EXOSC10Q01780 885 aaKnown RBP17.31■□□□□ 0.36
CD48-203ENST00000613788 RABEP1Q15276 862 aa17.31■□□□□ 0.36
CD48-203ENST00000613788 CST9Q5W186 159 aa17.31■□□□□ 0.36
CD48-203ENST00000613788 CYB5R4Q7L1T6 521 aa17.31■□□□□ 0.36
CD48-203ENST00000613788 SCYL3Q8IZE3 742 aa17.31■□□□□ 0.36
CD48-203ENST00000613788 ZKSCAN4Q969J2 545 aaPredicted RBP17.31■□□□□ 0.36
CD48-203ENST00000613788 KANSL2Q9H9L4 492 aa17.31■□□□□ 0.36
CD48-203ENST00000613788 PICK1Q9NRD5 415 aa17.31■□□□□ 0.36
CD48-203ENST00000613788 WDR19Q8NEZ3 1342 aa17.31■□□□□ 0.36
CD48-203ENST00000613788 NOL9Q5SY16 702 aaKnown RBP17.31■□□□□ 0.36
CD48-203ENST00000613788 TMEM87BQ96K49 555 aa17.31■□□□□ 0.36
CD48-203ENST00000613788 TTC14Q96N46 770 aa17.31■□□□□ 0.36
CD48-203ENST00000613788 ZSCAN10Q96SZ4 725 aaPredicted RBP17.31■□□□□ 0.36
CD48-203ENST00000613788 UPF3BQ9BZI7 483 aaKnown RBP17.31■□□□□ 0.36
CD48-203ENST00000613788 ZBTB21Q9ULJ3 1066 aa17.31■□□□□ 0.36
CD48-203ENST00000613788 PLIN4Q96Q06 1357 aa17.3■□□□□ 0.36
CD48-203ENST00000613788 UBE2Q2LH0YL09 131 aa17.3■□□□□ 0.36
CD48-203ENST00000613788 IFIT3O14879 490 aaKnown RBP17.3■□□□□ 0.36
CD48-203ENST00000613788 NEK4P51957 841 aa17.3■□□□□ 0.36
CD48-203ENST00000613788 FGD1P98174 961 aa17.3■□□□□ 0.36
CD48-203ENST00000613788 SEPT2Q15019 361 aa17.3■□□□□ 0.36
CD48-203ENST00000613788 RAB3GAP1Q15042 981 aa17.3■□□□□ 0.36
CD48-203ENST00000613788 LDLRAD1Q5T700 205 aa17.3■□□□□ 0.36
CD48-203ENST00000613788 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.3■□□□□ 0.36
CD48-203ENST00000613788 MOB2Q70IA6 237 aa17.3■□□□□ 0.36
CD48-203ENST00000613788 CHST3Q7LGC8 479 aa17.3■□□□□ 0.36
CD48-203ENST00000613788 NKX2-3Q8TAU0 364 aa17.3■□□□□ 0.36
CD48-203ENST00000613788 ZKSCAN3Q9BRR0 538 aa17.3■□□□□ 0.36
CD48-203ENST00000613788 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.3■□□□□ 0.36
CD48-203ENST00000613788 IGKV6D-41A0A0C4DH26 115 aa17.29■□□□□ 0.36
CD48-203ENST00000613788 CPA1P15085 419 aa17.29■□□□□ 0.36
CD48-203ENST00000613788 ANTXR2P58335 489 aa17.29■□□□□ 0.36
CD48-203ENST00000613788 JAG1P78504 1218 aa17.29■□□□□ 0.36
CD48-203ENST00000613788 VGLL4Q14135 290 aa17.29■□□□□ 0.36
CD48-203ENST00000613788 DGKHQ86XP1 1220 aa17.29■□□□□ 0.36
CD48-203ENST00000613788 TMTC2Q8N394 836 aa17.29■□□□□ 0.36
CD48-203ENST00000613788 IL17RBQ9NRM6 502 aa17.29■□□□□ 0.36
CD48-203ENST00000613788 PDRG1Q9NUG6 133 aa17.29■□□□□ 0.36
CD48-203ENST00000613788 MTMR4Q9NYA4 1195 aa17.29■□□□□ 0.36
CD48-203ENST00000613788 USP17L5A8MUK1 530 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms