RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 PPP2R2CQ9Y2T4 447 aa9.69□□□□□ -0.86
TTC28-208ENST00000612946 TROQ12816 1431 aaPredicted RBP9.69□□□□□ -0.86
TTC28-208ENST00000612946 GNAT2P19087 354 aa9.69□□□□□ -0.86
TTC28-208ENST00000612946 CTAGE3PQ8IX95 158 aa9.69□□□□□ -0.86
TTC28-208ENST00000612946 RETREG2Q8NC44 543 aa9.69□□□□□ -0.86
TTC28-208ENST00000612946 DIABLOQ9NR28 239 aa9.69□□□□□ -0.86
TTC28-208ENST00000612946 BIVM-ERCC5R4GMW8 1640 aa9.69□□□□□ -0.86
TTC28-208ENST00000612946 SYCP3Q8IZU3 236 aa9.69□□□□□ -0.86
TTC28-208ENST00000612946 MAGEF1Q9HAY2 307 aa9.69□□□□□ -0.86
TTC28-208ENST00000612946 IGHDP01880 384 aa9.69□□□□□ -0.86
TTC28-208ENST00000612946 RTN1Q16799 776 aa9.69□□□□□ -0.86
TTC28-208ENST00000612946 ARHGEF18Q6ZSZ5 1173 aa9.69□□□□□ -0.86
TTC28-208ENST00000612946 ALG1Q9BT22 464 aa9.69□□□□□ -0.86
TTC28-208ENST00000612946 CHMP2AO43633 222 aa9.69□□□□□ -0.86
TTC28-208ENST00000612946 CCT6BQ92526 530 aa9.69□□□□□ -0.86
TTC28-208ENST00000612946 IMPG2Q9BZV3 1241 aa9.69□□□□□ -0.86
TTC28-208ENST00000612946 CLCN6P51797 869 aa9.69□□□□□ -0.86
TTC28-208ENST00000612946 PARP9Q8IXQ6 854 aa9.69□□□□□ -0.86
TTC28-208ENST00000612946 C10orf76Q5T2E6 689 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 TMCO5AQ8N6Q1 288 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 C3orf20Q8ND61 904 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 HAUS2Q9NVX0 235 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 SLC8A3P57103 927 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.68□□□□□ -0.86
TTC28-208ENST00000612946 LIN9Q5TKA1 542 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 ABCA5Q8WWZ7 1642 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 FAM177BA6PVY3 158 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 HNRNPH2P55795 449 aaKnown RBP9.68□□□□□ -0.86
TTC28-208ENST00000612946 SERPINI1Q99574 410 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 KRT5P13647 590 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 INPP1P49441 399 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 MRPS35P82673 323 aaKnown RBP9.68□□□□□ -0.86
TTC28-208ENST00000612946 OCA2Q04671 838 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.68□□□□□ -0.86
TTC28-208ENST00000612946 BZW2Q9Y6E2 419 aaKnown RBP9.68□□□□□ -0.86
TTC28-208ENST00000612946 BRD1O95696 1058 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 LRRC43Q8N309 656 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 UBA5Q9GZZ9 404 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 FAM96AQ9H5X1 160 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 PFDN4Q9NQP4 134 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 SETD1BQ9UPS6 1966 aaKnown RBP9.68□□□□□ -0.86
TTC28-208ENST00000612946 MAP7D3Q8IWC1 876 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 CFAP61Q8NHU2 1237 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 TBC1D23Q9NUY8 699 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 EIF3DO15371 548 aaKnown RBP eCLIP9.68□□□□□ -0.86
TTC28-208ENST00000612946 GSTA2P09210 222 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 ELF1P32519 619 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 KRT2P35908 639 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 MKRN3Q13064 507 aaKnown RBP9.68□□□□□ -0.86
TTC28-208ENST00000612946 PPP1R13BQ96KQ4 1090 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 GLT8D2Q9H1C3 349 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 EPRSP07814 1512 aaKnown RBP9.68□□□□□ -0.86
TTC28-208ENST00000612946 PASKQ96RG2 1323 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 POLE2P56282 527 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 PHF23Q9BUL5 403 aaPredicted RBP9.68□□□□□ -0.86
TTC28-208ENST00000612946 KCNH3Q9ULD8 1083 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 E2F4Q16254 413 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 SRLQ86TD4 932 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 TM6SF1Q9BZW5 370 aa9.68□□□□□ -0.86
TTC28-208ENST00000612946 GNAT3A8MTJ3 354 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 RANBP1P43487 201 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 KCNJ6P48051 423 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 HDAC4P56524 1084 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 CXorf38Q8TB03 319 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 DCTPP1Q9H773 170 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 VIPAS39Q9H9C1 493 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 ADAM21Q9UKJ8 722 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 FAM169AQ9Y6X4 670 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 GOLGA4Q13439 2230 aaKnown RBP9.67□□□□□ -0.86
TTC28-208ENST00000612946 IQGAP2Q13576 1575 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 ADGRL1O94910 1474 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 SMIM23A6NLE4 172 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 PRPF6O94906 941 aaKnown RBP9.67□□□□□ -0.86
TTC28-208ENST00000612946 EEF1DP29692 281 aaKnown RBP9.67□□□□□ -0.86
TTC28-208ENST00000612946 LOC102724159A0A0B4J2E5 919 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 PDE6CP51160 858 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 PAK1Q13153 545 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 PWP2Q15269 919 aaKnown RBP9.67□□□□□ -0.86
TTC28-208ENST00000612946 SEPT3Q9UH03 358 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 GON4LQ3T8J9 2241 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 TEX14Q8IWB6 1497 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 HS2ST1Q7LGA3 356 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 PEX26Q7Z412 305 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 TARSL2A2RTX5 802 aaKnown RBP9.67□□□□□ -0.86
TTC28-208ENST00000612946 IQCA1LA6NCM1 817 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 NR1D1P20393 614 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 DHX32Q7L7V1 743 aaKnown RBP9.67□□□□□ -0.86
TTC28-208ENST00000612946 MORC4Q8TE76 937 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 EPB41P11171 864 aaKnown RBP9.67□□□□□ -0.86
TTC28-208ENST00000612946 LRP2BPQ9P2M1 347 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 ANGPTL3Q9Y5C1 460 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 MAK16Q9BXY0 300 aaKnown RBP9.67□□□□□ -0.86
TTC28-208ENST00000612946 TRIM15Q9C019 465 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 MCMDC2Q4G0Z9 681 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 PDXDC1Q6P996 788 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 NDE1Q9NXR1 346 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 HNRNPCP07910 306 aaKnown RBP eCLIP9.67□□□□□ -0.86
TTC28-208ENST00000612946 RCSD1Q6JBY9 416 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 TERB1Q8NA31 727 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 GGNBP2Q9H3C7 697 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms