RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 CYP46A1Q9Y6A2 500 aa15.16■□□□□ 0.02
PRKN-210ENST00000612540 TACC3Q9Y6A5 838 aa15.16■□□□□ 0.02
PRKN-210ENST00000612540 ADM5C9JUS6 153 aa15.15■□□□□ 0.02
PRKN-210ENST00000612540 KDM4AO75164 1064 aa15.15■□□□□ 0.02
PRKN-210ENST00000612540 PCP11498 1178 aaKnown RBP15.15■□□□□ 0.02
PRKN-210ENST00000612540 CDK8P49336 464 aa15.15■□□□□ 0.02
PRKN-210ENST00000612540 HHIPL1Q96JK4 782 aa15.15■□□□□ 0.02
PRKN-210ENST00000612540 KIF2CQ99661 725 aa15.15■□□□□ 0.02
PRKN-210ENST00000612540 TM6SF1Q9BZW5 370 aa15.15■□□□□ 0.02
PRKN-210ENST00000612540 EHD4Q9H223 541 aa15.15■□□□□ 0.02
PRKN-210ENST00000612540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.15■□□□□ 0.02
PRKN-210ENST00000612540 SWAP70Q9UH65 585 aa15.15■□□□□ 0.02
PRKN-210ENST00000612540 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.15■□□□□ 0.02
PRKN-210ENST00000612540 PPP2R3BQ9Y5P8 575 aa15.15■□□□□ 0.02
PRKN-210ENST00000612540 ORC4O43929 436 aa15.14■□□□□ 0.01
PRKN-210ENST00000612540 AOC2O75106 756 aa15.14■□□□□ 0.01
PRKN-210ENST00000612540 HMGB1P09429 215 aaKnown RBP15.14■□□□□ 0.01
PRKN-210ENST00000612540 SLURP2P0DP57 97 aa15.14■□□□□ 0.01
PRKN-210ENST00000612540 MAP2K2P36507 400 aa15.14■□□□□ 0.01
PRKN-210ENST00000612540 NEK4P51957 841 aa15.14■□□□□ 0.01
PRKN-210ENST00000612540 FGD1P98174 961 aa15.14■□□□□ 0.01
PRKN-210ENST00000612540 PRAMEF18Q5VWM3 479 aa15.14■□□□□ 0.01
PRKN-210ENST00000612540 FOXP4Q8IVH2 680 aaPredicted RBP15.14■□□□□ 0.01
PRKN-210ENST00000612540 ZNF444Q8N0Y2 327 aaPredicted RBP15.14■□□□□ 0.01
PRKN-210ENST00000612540 ESR2Q92731 530 aa15.14■□□□□ 0.01
PRKN-210ENST00000612540 TCEANC2Q96MN5 208 aa15.14■□□□□ 0.01
PRKN-210ENST00000612540 TSPY2A6NKD2 308 aa15.13■□□□□ 0.01
PRKN-210ENST00000612540 RPS6KB1P23443 525 aa15.13■□□□□ 0.01
PRKN-210ENST00000612540 MCM5P33992 734 aa15.13■□□□□ 0.01
PRKN-210ENST00000612540 GABPAQ06546 454 aa15.13■□□□□ 0.01
PRKN-210ENST00000612540 FAM47AQ5JRC9 791 aa15.13■□□□□ 0.01
PRKN-210ENST00000612540 NBPF12Q5TAG4 269 aaPredicted RBP15.13■□□□□ 0.01
PRKN-210ENST00000612540 RUFY3Q7L099 469 aa15.13■□□□□ 0.01
PRKN-210ENST00000612540 MIGA2Q7L4E1 593 aa15.13■□□□□ 0.01
PRKN-210ENST00000612540 CHST3Q7LGC8 479 aa15.13■□□□□ 0.01
PRKN-210ENST00000612540 USP48Q86UV5 1035 aa15.13■□□□□ 0.01
PRKN-210ENST00000612540 MB21D2Q8IYB1 491 aaPredicted RBP15.13■□□□□ 0.01
PRKN-210ENST00000612540 HOOK2Q96ED9 719 aa15.13■□□□□ 0.01
PRKN-210ENST00000612540 IL17RAQ96F46 866 aa15.13■□□□□ 0.01
PRKN-210ENST00000612540 TEPSINQ96N21 525 aa15.13■□□□□ 0.01
PRKN-210ENST00000612540 ZNF408Q9H9D4 720 aa15.13■□□□□ 0.01
PRKN-210ENST00000612540 ZSWIM6Q9HCJ5 1215 aa15.13■□□□□ 0.01
PRKN-210ENST00000612540 PDRG1Q9NUG6 133 aa15.13■□□□□ 0.01
PRKN-210ENST00000612540 HERC5Q9UII4 1024 aaKnown RBP15.13■□□□□ 0.01
PRKN-210ENST00000612540 MPHOSPH10O00566 681 aaKnown RBP15.12■□□□□ 0.01
PRKN-210ENST00000612540 PRC1O43663 620 aa15.12■□□□□ 0.01
PRKN-210ENST00000612540 ST18O60284 1047 aa15.12■□□□□ 0.01
PRKN-210ENST00000612540 TSPY3P0CV98 308 aa15.12■□□□□ 0.01
PRKN-210ENST00000612540 TSPY8P0CW00 308 aa15.12■□□□□ 0.01
PRKN-210ENST00000612540 RASA1P20936 1047 aa15.12■□□□□ 0.01
PRKN-210ENST00000612540 SHMT1P34896 483 aa15.12■□□□□ 0.01
PRKN-210ENST00000612540 ANP32AP39687 249 aaKnown RBP15.12■□□□□ 0.01
PRKN-210ENST00000612540 COL9A3Q14050 684 aaPredicted RBP15.12■□□□□ 0.01
PRKN-210ENST00000612540 DCAF15Q66K64 600 aa15.12■□□□□ 0.01
PRKN-210ENST00000612540 DLK2Q6UY11 383 aa15.12■□□□□ 0.01
PRKN-210ENST00000612540 NOL8Q76FK4 1167 aaKnown RBP15.12■□□□□ 0.01
PRKN-210ENST00000612540 CYB5R4Q7L1T6 521 aa15.12■□□□□ 0.01
PRKN-210ENST00000612540 DHX32Q7L7V1 743 aaKnown RBP15.12■□□□□ 0.01
PRKN-210ENST00000612540 UBAC1Q9BSL1 405 aa15.12■□□□□ 0.01
PRKN-210ENST00000612540 BEGAINQ9BUH8 593 aa15.12■□□□□ 0.01
PRKN-210ENST00000612540 LRRC2Q9BYS8 371 aa15.12■□□□□ 0.01
PRKN-210ENST00000612540 DNAJC18Q9H819 358 aa15.12■□□□□ 0.01
PRKN-210ENST00000612540 RBM19Q9Y4C8 960 aaKnown RBP15.12■□□□□ 0.01
PRKN-210ENST00000612540 ATAD5Q96QE3 1844 aa15.11■□□□□ 0.01
PRKN-210ENST00000612540 FGRP09769 529 aa15.11■□□□□ 0.01
PRKN-210ENST00000612540 TFAP4Q01664 338 aa15.11■□□□□ 0.01
PRKN-210ENST00000612540 SART3Q15020 963 aaKnown RBP15.11■□□□□ 0.01
PRKN-210ENST00000612540 SUPT20HL1Q3ZLR7 823 aa15.11■□□□□ 0.01
PRKN-210ENST00000612540 NKX2-3Q8TAU0 364 aa15.11■□□□□ 0.01
PRKN-210ENST00000612540 ZKSCAN3Q9BRR0 538 aa15.11■□□□□ 0.01
PRKN-210ENST00000612540 TSKSQ9UJT2 592 aa15.11■□□□□ 0.01
PRKN-210ENST00000612540 ERICH2A1L162 156 aa15.1■□□□□ 0.01
PRKN-210ENST00000612540 IFIT3O14879 490 aaKnown RBP15.1■□□□□ 0.01
PRKN-210ENST00000612540 GDF11O95390 407 aa15.1■□□□□ 0.01
PRKN-210ENST00000612540 AKR1B1P15121 316 aa15.1■□□□□ 0.01
PRKN-210ENST00000612540 NF2P35240 595 aa15.1■□□□□ 0.01
PRKN-210ENST00000612540 ANTXR2P58335 489 aa15.1■□□□□ 0.01
PRKN-210ENST00000612540 PRKG1Q13976 671 aa15.1■□□□□ 0.01
PRKN-210ENST00000612540 CERKLQ49MI3 558 aaPredicted RBP15.1■□□□□ 0.01
PRKN-210ENST00000612540 IQCA1Q86XH1 822 aa15.1■□□□□ 0.01
PRKN-210ENST00000612540 CDCA5Q96FF9 252 aa15.1■□□□□ 0.01
PRKN-210ENST00000612540 ZNF341Q9BYN7 854 aa15.1■□□□□ 0.01
PRKN-210ENST00000612540 ZSWIM5Q9P217 1185 aa15.1■□□□□ 0.01
PRKN-210ENST00000612540 TAOK2Q9UL54 1235 aa15.1■□□□□ 0.01
PRKN-210ENST00000612540 TBC1D12O60347 775 aa15.09■□□□□ 0.01
PRKN-210ENST00000612540 TTLL12Q14166 644 aaPredicted RBP15.09■□□□□ 0.01
PRKN-210ENST00000612540 TMEM67Q5HYA8 995 aa15.09■□□□□ 0.01
PRKN-210ENST00000612540 Q6ZUG5 572 aa15.09■□□□□ 0.01
PRKN-210ENST00000612540 METTL16Q86W50 562 aaKnown RBP15.09■□□□□ 0.01
PRKN-210ENST00000612540 ABHD8Q96I13 439 aa15.09■□□□□ 0.01
PRKN-210ENST00000612540 CCDC17Q96LX7 622 aa15.09■□□□□ 0.01
PRKN-210ENST00000612540 NAP1L2Q9ULW6 460 aaPredicted RBP15.09■□□□□ 0.01
PRKN-210ENST00000612540 SSC5DA1L4H1 1573 aa15.09■□□□□ 0.01
PRKN-210ENST00000612540 MYH4Q9Y623 1939 aa15.09■□□□□ 0.01
PRKN-210ENST00000612540 DOCK1Q14185 1865 aa15.08■□□□□ 0.01
PRKN-210ENST00000612540 NT5C2P49902 561 aa15.08■□□□□ 0
PRKN-210ENST00000612540 AK2P54819 239 aa15.08■□□□□ 0
PRKN-210ENST00000612540 HUNKP57058 714 aa15.08■□□□□ 0
PRKN-210ENST00000612540 EXOSC10Q01780 885 aaKnown RBP15.08■□□□□ 0
PRKN-210ENST00000612540 ABCB5Q2M3G0 1257 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms