RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 CAPZA3Q96KX2 299 aa23.23■■□□□ 1.31
SMAD6-205ENST00000612349 AS3MTQ9HBK9 375 aa23.23■■□□□ 1.31
SMAD6-205ENST00000612349 FAM135BQ49AJ0 1406 aa23.22■■□□□ 1.31
SMAD6-205ENST00000612349 E7EWF7 191 aa23.22■■□□□ 1.31
SMAD6-205ENST00000612349 RAB3IL1Q8TBN0 382 aa23.22■■□□□ 1.31
SMAD6-205ENST00000612349 NT5C3AQ9H0P0 336 aa23.22■■□□□ 1.31
SMAD6-205ENST00000612349 ATP8A2Q9NTI2 1148 aa23.22■■□□□ 1.31
SMAD6-205ENST00000612349 SPOPO43791 374 aa23.22■■□□□ 1.31
SMAD6-205ENST00000612349 ECM2O94769 699 aaPredicted RBP23.22■■□□□ 1.31
SMAD6-205ENST00000612349 CFBP00751 764 aa23.22■■□□□ 1.31
SMAD6-205ENST00000612349 CCDC63Q8NA47 563 aa23.22■■□□□ 1.31
SMAD6-205ENST00000612349 ABCC4O15439 1325 aa23.22■■□□□ 1.31
SMAD6-205ENST00000612349 SYNRGQ9UMZ2 1314 aa23.22■■□□□ 1.31
SMAD6-205ENST00000612349 INF2Q27J81 1249 aa23.22■■□□□ 1.31
SMAD6-205ENST00000612349 VPS16Q9H269 839 aa23.22■■□□□ 1.31
SMAD6-205ENST00000612349 GAS8O95995 478 aa23.21■■□□□ 1.31
SMAD6-205ENST00000612349 TUBB2AQ13885 445 aa23.21■■□□□ 1.31
SMAD6-205ENST00000612349 TUBB2BQ9BVA1 445 aa23.21■■□□□ 1.31
SMAD6-205ENST00000612349 KDM2BQ8NHM5 1336 aa23.21■■□□□ 1.31
SMAD6-205ENST00000612349 ATRIPQ8WXE1 791 aa23.21■■□□□ 1.31
SMAD6-205ENST00000612349 TRIM6Q9C030 488 aaPredicted RBP23.21■■□□□ 1.31
SMAD6-205ENST00000612349 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.2■■□□□ 1.31
SMAD6-205ENST00000612349 GCC2Q8IWJ2 1684 aa23.2■■□□□ 1.3
SMAD6-205ENST00000612349 TTLL7Q6ZT98 887 aa23.2■■□□□ 1.3
SMAD6-205ENST00000612349 CNKSR1Q969H4 720 aa23.2■■□□□ 1.3
SMAD6-205ENST00000612349 SPATA31E1Q6ZUB1 1445 aa23.2■■□□□ 1.3
SMAD6-205ENST00000612349 CYP26C1Q6V0L0 522 aa23.2■■□□□ 1.3
SMAD6-205ENST00000612349 NLGN1Q8N2Q7 840 aa23.2■■□□□ 1.3
SMAD6-205ENST00000612349 PHKBQ93100 1093 aa23.2■■□□□ 1.3
SMAD6-205ENST00000612349 MYL10Q9BUA6 226 aa23.2■■□□□ 1.3
SMAD6-205ENST00000612349 MLH3Q9UHC1 1453 aa23.2■■□□□ 1.3
SMAD6-205ENST00000612349 AATKQ6ZMQ8 1374 aa23.2■■□□□ 1.3
SMAD6-205ENST00000612349 ZNF202O95125 648 aa23.2■■□□□ 1.3
SMAD6-205ENST00000612349 DCAF15Q66K64 600 aa23.2■■□□□ 1.3
SMAD6-205ENST00000612349 ANKS4BQ8N8V4 417 aa23.2■■□□□ 1.3
SMAD6-205ENST00000612349 CSADQ9Y600 493 aa23.2■■□□□ 1.3
SMAD6-205ENST00000612349 USP17L12C9JPN9 530 aa23.19■■□□□ 1.3
SMAD6-205ENST00000612349 USP17L21D6R901 530 aa23.19■■□□□ 1.3
SMAD6-205ENST00000612349 NLRX1Q86UT6 975 aa23.19■■□□□ 1.3
SMAD6-205ENST00000612349 GPR161Q8N6U8 529 aaKnown RBP23.19■■□□□ 1.3
SMAD6-205ENST00000612349 ASIC2Q16515 512 aa23.19■■□□□ 1.3
SMAD6-205ENST00000612349 SYT10Q6XYQ8 523 aa23.19■■□□□ 1.3
SMAD6-205ENST00000612349 IWS1Q96ST2 819 aa23.19■■□□□ 1.3
SMAD6-205ENST00000612349 ZBTB16Q05516 673 aa23.19■■□□□ 1.3
SMAD6-205ENST00000612349 CCDC84Q86UT8 332 aaPredicted RBP23.19■■□□□ 1.3
SMAD6-205ENST00000612349 ZNF654Q8IZM8 581 aa23.19■■□□□ 1.3
SMAD6-205ENST00000612349 ZNF274Q96GC6 653 aaPredicted RBP23.19■■□□□ 1.3
SMAD6-205ENST00000612349 TIGD1Q96MW7 591 aa23.19■■□□□ 1.3
SMAD6-205ENST00000612349 IVLP07476 585 aa23.19■■□□□ 1.3
SMAD6-205ENST00000612349 MXRA7P84157 204 aa23.19■■□□□ 1.3
SMAD6-205ENST00000612349 CCDC114Q96M63 670 aa23.19■■□□□ 1.3
SMAD6-205ENST00000612349 SLC5A4Q9NY91 659 aa23.19■■□□□ 1.3
SMAD6-205ENST00000612349 USH1GQ495M9 461 aa23.18■■□□□ 1.3
SMAD6-205ENST00000612349 SLC9C1Q4G0N8 1177 aa23.18■■□□□ 1.3
SMAD6-205ENST00000612349 OTUD7BQ6GQQ9 843 aa23.18■■□□□ 1.3
SMAD6-205ENST00000612349 CABP7Q86V35 215 aa23.18■■□□□ 1.3
SMAD6-205ENST00000612349 ARHGEF25Q86VW2 580 aa23.18■■□□□ 1.3
SMAD6-205ENST00000612349 SMC6Q96SB8 1091 aa23.18■■□□□ 1.3
SMAD6-205ENST00000612349 EXOC3O60645 756 aa23.18■■□□□ 1.3
SMAD6-205ENST00000612349 ERCC5P28715 1186 aaPredicted RBP23.18■■□□□ 1.3
SMAD6-205ENST00000612349 MYCT1Q8N699 235 aa23.18■■□□□ 1.3
SMAD6-205ENST00000612349 KDM5AP29375 1690 aaKnown RBP23.18■■□□□ 1.3
SMAD6-205ENST00000612349 MAGI2Q86UL8 1455 aa23.18■■□□□ 1.3
SMAD6-205ENST00000612349 GNPTABQ3T906 1256 aa23.17■■□□□ 1.3
SMAD6-205ENST00000612349 IFT81Q8WYA0 676 aa23.17■■□□□ 1.3
SMAD6-205ENST00000612349 AGTPBP1Q9UPW5 1226 aa23.17■■□□□ 1.3
SMAD6-205ENST00000612349 SSH2Q76I76 1423 aa23.17■■□□□ 1.3
SMAD6-205ENST00000612349 ALDH3A1P30838 453 aa23.17■■□□□ 1.3
SMAD6-205ENST00000612349 IQCDQ96DY2 449 aa23.17■■□□□ 1.3
SMAD6-205ENST00000612349 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.17■■□□□ 1.31e-8■■■■■ 47.9
SMAD6-205ENST00000612349 NLRP12P59046 1061 aa23.17■■□□□ 1.3
SMAD6-205ENST00000612349 BEGAINQ9BUH8 593 aa23.17■■□□□ 1.3
SMAD6-205ENST00000612349 GINS2Q9Y248 185 aa23.17■■□□□ 1.3
SMAD6-205ENST00000612349 FANCCQ00597 558 aa23.17■■□□□ 1.3
SMAD6-205ENST00000612349 MAP3K15Q6ZN16 1313 aa23.17■■□□□ 1.3
SMAD6-205ENST00000612349 KDM3AQ9Y4C1 1321 aa23.17■■□□□ 1.3
SMAD6-205ENST00000612349 SMCR8Q8TEV9 937 aaPredicted RBP23.16■■□□□ 1.3
SMAD6-205ENST00000612349 KIFC2Q96AC6 838 aa23.16■■□□□ 1.3
SMAD6-205ENST00000612349 PCP11498 1178 aaKnown RBP23.16■■□□□ 1.3
SMAD6-205ENST00000612349 CFAP58Q5T655 872 aa23.16■■□□□ 1.3
SMAD6-205ENST00000612349 FAM204AQ9H8W3 233 aa23.16■■□□□ 1.3
SMAD6-205ENST00000612349 NPHP4O75161 1426 aaPredicted RBP23.16■■□□□ 1.3
SMAD6-205ENST00000612349 M0QZ92 97 aa23.16■■□□□ 1.3
SMAD6-205ENST00000612349 PDE6AP16499 860 aa23.16■■□□□ 1.3
SMAD6-205ENST00000612349 POSTNQ15063 836 aa23.16■■□□□ 1.3
SMAD6-205ENST00000612349 BEND3Q5T5X7 828 aa23.16■■□□□ 1.3
SMAD6-205ENST00000612349 OTUD6AQ7L8S5 288 aa23.16■■□□□ 1.3
SMAD6-205ENST00000612349 UBL4BQ8N7F7 174 aa23.16■■□□□ 1.3
SMAD6-205ENST00000612349 NLRP1Q9C000 1473 aa23.16■■□□□ 1.3
SMAD6-205ENST00000612349 SAMD9LQ8IVG5 1584 aa23.16■■□□□ 1.3
SMAD6-205ENST00000612349 SMCO2A6NFE2 343 aa23.16■■□□□ 1.3
SMAD6-205ENST00000612349 CCDC25Q86WR0 208 aa23.16■■□□□ 1.3
SMAD6-205ENST00000612349 HACE1Q8IYU2 909 aa23.16■■□□□ 1.3
SMAD6-205ENST00000612349 CARD10Q9BWT7 1032 aa23.16■■□□□ 1.3
SMAD6-205ENST00000612349 TMTC1Q8IUR5 882 aa23.15■■□□□ 1.3
SMAD6-205ENST00000612349 NUCKS1Q9H1E3 243 aaKnown RBP23.15■■□□□ 1.3
SMAD6-205ENST00000612349 MAPK8IP1Q9UQF2 711 aa23.15■■□□□ 1.3
SMAD6-205ENST00000612349 ACTN4O43707 911 aaKnown RBP23.15■■□□□ 1.3
SMAD6-205ENST00000612349 IFNL3Q8IZI9 196 aa23.15■■□□□ 1.3
SMAD6-205ENST00000612349 LOC102724428A0A0B4J2F2 783 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms