RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 CCDC83Q8IWF9 413 aa9.55□□□□□ -0.88
TARDBP-213ENST00000611963 NECAB1Q8N987 351 aa9.55□□□□□ -0.88
TARDBP-213ENST00000611963 IL27Q8NEV9 243 aa9.55□□□□□ -0.88
TARDBP-213ENST00000611963 BRF1Q92994 677 aa9.55□□□□□ -0.88
TARDBP-213ENST00000611963 ALDH8A1Q9H2A2 487 aaPredicted RBP9.55□□□□□ -0.88
TARDBP-213ENST00000611963 TOMM22Q9NS69 142 aa9.55□□□□□ -0.88
TARDBP-213ENST00000611963 MCM9Q9NXL9 1143 aa9.55□□□□□ -0.88
TARDBP-213ENST00000611963 GPRC5DQ9NZD1 345 aa9.55□□□□□ -0.88
TARDBP-213ENST00000611963 MKRN1Q9UHC7 482 aaKnown RBP9.55□□□□□ -0.88
TARDBP-213ENST00000611963 ANAPC4Q9UJX5 808 aa9.55□□□□□ -0.88
TARDBP-213ENST00000611963 SHTN1A0MZ66 631 aa9.54□□□□□ -0.88
TARDBP-213ENST00000611963 KDM4AO75164 1064 aa9.54□□□□□ -0.88
TARDBP-213ENST00000611963 VIL1P09327 827 aaKnown RBP9.54□□□□□ -0.88
TARDBP-213ENST00000611963 MCM5P33992 734 aa9.54□□□□□ -0.88
TARDBP-213ENST00000611963 DDIT3P35638 169 aa9.54□□□□□ -0.88
TARDBP-213ENST00000611963 GMPSP49915 693 aaPredicted RBP9.54□□□□□ -0.88
TARDBP-213ENST00000611963 RBM5P52756 815 aaKnown RBP eCLIP9.54□□□□□ -0.88
TARDBP-213ENST00000611963 STK3Q13188 491 aa9.54□□□□□ -0.88
TARDBP-213ENST00000611963 SBK1Q52WX2 424 aa9.54□□□□□ -0.88
TARDBP-213ENST00000611963 MAP1SQ66K74 1059 aaPredicted RBP9.54□□□□□ -0.88
TARDBP-213ENST00000611963 APOBEC3HQ6NTF7 200 aaKnown RBP9.54□□□□□ -0.88
TARDBP-213ENST00000611963 CDC42EP5Q6NZY7 148 aa9.54□□□□□ -0.88
TARDBP-213ENST00000611963 HHIPL2Q6UWX4 724 aa9.54□□□□□ -0.88
TARDBP-213ENST00000611963 PNMA8AQ86V59 439 aaPredicted RBP9.54□□□□□ -0.88
TARDBP-213ENST00000611963 CERS3Q8IU89 383 aa9.54□□□□□ -0.88
TARDBP-213ENST00000611963 JMYQ8N9B5 988 aa9.54□□□□□ -0.88
TARDBP-213ENST00000611963 ZSCAN31Q96LW9 406 aaPredicted RBP9.54□□□□□ -0.88
TARDBP-213ENST00000611963 ZDHHC15Q96MV8 337 aa9.54□□□□□ -0.88
TARDBP-213ENST00000611963 DDX4Q9NQI0 724 aaKnown RBP9.54□□□□□ -0.88
TARDBP-213ENST00000611963 USP40Q9NVE5 1235 aa9.54□□□□□ -0.88
TARDBP-213ENST00000611963 ARPP21Q9UBL0 812 aaPredicted RBP9.54□□□□□ -0.88
TARDBP-213ENST00000611963 MYH6P13533 1939 aa9.54□□□□□ -0.88
TARDBP-213ENST00000611963 SIPA1L1O43166 1804 aa9.54□□□□□ -0.88
TARDBP-213ENST00000611963 FLT1P17948 1338 aa9.54□□□□□ -0.88
TARDBP-213ENST00000611963 BAZ2BQ9UIF8 2168 aaKnown RBP9.53□□□□□ -0.88
TARDBP-213ENST00000611963 TCHHQ07283 1943 aa9.53□□□□□ -0.88
TARDBP-213ENST00000611963 GTPBP6O43824 516 aaPredicted RBP9.53□□□□□ -0.88
TARDBP-213ENST00000611963 PRDM1O75626 825 aa9.53□□□□□ -0.88
TARDBP-213ENST00000611963 LMOD1P29536 600 aaPredicted RBP9.53□□□□□ -0.88
TARDBP-213ENST00000611963 FMR1Q06787 632 aaKnown RBP eCLIP9.53□□□□□ -0.88
TARDBP-213ENST00000611963 PICALMQ13492 652 aa9.53□□□□□ -0.88
TARDBP-213ENST00000611963 CFAP100Q494V2 611 aa9.53□□□□□ -0.88
TARDBP-213ENST00000611963 DYNLL2Q96FJ2 89 aa9.53□□□□□ -0.88
TARDBP-213ENST00000611963 GMLQ99445 158 aa9.53□□□□□ -0.88
TARDBP-213ENST00000611963 AGXT2Q9BYV1 514 aa9.53□□□□□ -0.88
TARDBP-213ENST00000611963 KRT23Q9C075 422 aa9.53□□□□□ -0.88
TARDBP-213ENST00000611963 RNF41Q9H4P4 317 aaPredicted RBP9.53□□□□□ -0.88
TARDBP-213ENST00000611963 CNNM2Q9H8M5 875 aa9.53□□□□□ -0.88
TARDBP-213ENST00000611963 SENP2Q9HC62 589 aa9.53□□□□□ -0.88
TARDBP-213ENST00000611963 SH2B1Q9NRF2 756 aaPredicted RBP9.53□□□□□ -0.88
TARDBP-213ENST00000611963 ADARB2Q9NS39 739 aaKnown RBP9.53□□□□□ -0.88
TARDBP-213ENST00000611963 SERPINA10Q9UK55 444 aa9.53□□□□□ -0.88
TARDBP-213ENST00000611963 NAP1L2Q9ULW6 460 aaPredicted RBP9.53□□□□□ -0.88
TARDBP-213ENST00000611963 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.53□□□□□ -0.88
TARDBP-213ENST00000611963 SH2B2O14492 632 aaPredicted RBP9.52□□□□□ -0.89
TARDBP-213ENST00000611963 WDHD1O75717 1129 aaPredicted RBP9.52□□□□□ -0.89
TARDBP-213ENST00000611963 POLR3DP05423 398 aaPredicted RBP9.52□□□□□ -0.89
TARDBP-213ENST00000611963 PLCD1P51178 756 aa9.52□□□□□ -0.89
TARDBP-213ENST00000611963 HIRAP54198 1017 aaPredicted RBP9.52□□□□□ -0.89
TARDBP-213ENST00000611963 CACNB3P54284 484 aa9.52□□□□□ -0.89
TARDBP-213ENST00000611963 HDLBPQ00341 1268 aaKnown RBP9.52□□□□□ -0.89
TARDBP-213ENST00000611963 NFIAQ12857 509 aa9.52□□□□□ -0.89
TARDBP-213ENST00000611963 TMEM67Q5HYA8 995 aa9.52□□□□□ -0.89
TARDBP-213ENST00000611963 C12orf60Q5U649 245 aa9.52□□□□□ -0.89
TARDBP-213ENST00000611963 USP50Q70EL3 339 aaPredicted RBP9.52□□□□□ -0.89
TARDBP-213ENST00000611963 RAB11FIP4Q86YS3 637 aa9.52□□□□□ -0.89
TARDBP-213ENST00000611963 SLC44A5Q8NCS7 719 aa9.52□□□□□ -0.89
TARDBP-213ENST00000611963 TRPM4Q8TD43 1214 aa9.52□□□□□ -0.89
TARDBP-213ENST00000611963 ZKSCAN3Q9BRR0 538 aa9.52□□□□□ -0.89
TARDBP-213ENST00000611963 MRIQ9BWK5 157 aa9.52□□□□□ -0.89
TARDBP-213ENST00000611963 CHMP5Q9NZZ3 219 aa9.52□□□□□ -0.89
TARDBP-213ENST00000611963 ZSWIM5Q9P217 1185 aa9.52□□□□□ -0.89
TARDBP-213ENST00000611963 WDR19Q8NEZ3 1342 aa9.52□□□□□ -0.89
TARDBP-213ENST00000611963 MYO3BQ8WXR4 1341 aa9.52□□□□□ -0.89
TARDBP-213ENST00000611963 ROBO3Q96MS0 1386 aa9.51□□□□□ -0.89
TARDBP-213ENST00000611963 KLF18A0A0U1RQI7 1052 aa9.51□□□□□ -0.89
TARDBP-213ENST00000611963 GOLGA8BA8MQT2 603 aa9.51□□□□□ -0.89
TARDBP-213ENST00000611963 IFIT3O14879 490 aaKnown RBP9.51□□□□□ -0.89
TARDBP-213ENST00000611963 ORC4O43929 436 aa9.51□□□□□ -0.89
TARDBP-213ENST00000611963 RANBP6O60518 1105 aaKnown RBP9.51□□□□□ -0.89
TARDBP-213ENST00000611963 SLC3A2P08195 630 aaKnown RBP9.51□□□□□ -0.89
TARDBP-213ENST00000611963 TNIP1Q15025 636 aa9.51□□□□□ -0.89
TARDBP-213ENST00000611963 FAM47AQ5JRC9 791 aa9.51□□□□□ -0.89
TARDBP-213ENST00000611963 AMOTL1Q8IY63 956 aa9.51□□□□□ -0.89
TARDBP-213ENST00000611963 IGDCC4Q8TDY8 1250 aa9.51□□□□□ -0.89
TARDBP-213ENST00000611963 ESR2Q92731 530 aa9.51□□□□□ -0.89
TARDBP-213ENST00000611963 GTF3C6Q969F1 213 aa9.51□□□□□ -0.89
TARDBP-213ENST00000611963 INTS4Q96HW7 963 aaKnown RBP9.51□□□□□ -0.89
TARDBP-213ENST00000611963 TDRD3Q9H7E2 651 aaKnown RBP9.51□□□□□ -0.89
TARDBP-213ENST00000611963 LY9Q9HBG7 655 aa9.51□□□□□ -0.89
TARDBP-213ENST00000611963 NCOA5Q9HCD5 579 aaKnown RBP9.51□□□□□ -0.89
TARDBP-213ENST00000611963 BRPF3Q9ULD4 1205 aa9.51□□□□□ -0.89
TARDBP-213ENST00000611963 ANGEL1Q9UNK9 670 aaKnown RBP9.51□□□□□ -0.89
TARDBP-213ENST00000611963 POLR2AP24928 1970 aaKnown RBP9.51□□□□□ -0.89
TARDBP-213ENST00000611963 PCNTO95613 3336 aa9.51□□□□□ -0.89
TARDBP-213ENST00000611963 TRAF5O00463 557 aa9.5□□□□□ -0.89
TARDBP-213ENST00000611963 PFKFB2O60825 505 aa9.5□□□□□ -0.89
TARDBP-213ENST00000611963 EGFRP00533 1210 aa9.5□□□□□ -0.89
TARDBP-213ENST00000611963 FGRP09769 529 aa9.5□□□□□ -0.89
TARDBP-213ENST00000611963 PCP11498 1178 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms