RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 TRIM75PA6NK02 468 aa16.62■□□□□ 0.25
CTSA-218ENST00000607814 PABPC4Q13310 644 aaKnown RBP eCLIP16.62■□□□□ 0.25
CTSA-218ENST00000607814 ZSCAN29Q8IWY8 852 aaPredicted RBP16.62■□□□□ 0.25
CTSA-218ENST00000607814 FAM163AQ96GL9 167 aaPredicted RBP16.62■□□□□ 0.25
CTSA-218ENST00000607814 CRBNQ96SW2 442 aa16.62■□□□□ 0.25
CTSA-218ENST00000607814 DDX4Q9NQI0 724 aaKnown RBP16.62■□□□□ 0.25
CTSA-218ENST00000607814 MTMR10Q9NXD2 777 aa16.62■□□□□ 0.25
CTSA-218ENST00000607814 ZMYND8Q9ULU4 1186 aaPredicted RBP16.62■□□□□ 0.25
CTSA-218ENST00000607814 MROH7-TTC4A0A0A0MT08 1334 aa16.62■□□□□ 0.25
CTSA-218ENST00000607814 VCANP13611 3396 aa16.61■□□□□ 0.25
CTSA-218ENST00000607814 TBC1D12O60347 775 aa16.61■□□□□ 0.25
CTSA-218ENST00000607814 NPM3O75607 178 aaKnown RBP16.61■□□□□ 0.25
CTSA-218ENST00000607814 MAGEA10P43363 369 aaPredicted RBP16.61■□□□□ 0.25
CTSA-218ENST00000607814 HSP90AB4PQ58FF6 505 aa16.61■□□□□ 0.25
CTSA-218ENST00000607814 SH3BP5LQ7L8J4 393 aa16.61■□□□□ 0.25
CTSA-218ENST00000607814 CHMP4BQ9H444 224 aaKnown RBP16.61■□□□□ 0.25
CTSA-218ENST00000607814 C11orf49Q9H6J7 331 aa16.61■□□□□ 0.25
CTSA-218ENST00000607814 GJD2Q9UKL4 321 aa16.61■□□□□ 0.25
CTSA-218ENST00000607814 OGDHLQ9ULD0 1010 aa16.61■□□□□ 0.25
CTSA-218ENST00000607814 GPR75-ASB3A0A0A6YYF3 556 aa16.6■□□□□ 0.25
CTSA-218ENST00000607814 Q7L0L9 218 aa16.6■□□□□ 0.25
CTSA-218ENST00000607814 ADGRA1Q86SQ6 560 aa16.6■□□□□ 0.25
CTSA-218ENST00000607814 CLASRPQ8N2M8 674 aaKnown RBP16.6■□□□□ 0.25
CTSA-218ENST00000607814 KIF1BPQ96EK5 621 aa16.6■□□□□ 0.25
CTSA-218ENST00000607814 PCDHB15Q9Y5E8 787 aa16.6■□□□□ 0.25
CTSA-218ENST00000607814 DDTLA6NHG4 134 aaPredicted RBP16.59■□□□□ 0.25
CTSA-218ENST00000607814 IFIT2P09913 472 aaKnown RBP16.59■□□□□ 0.25
CTSA-218ENST00000607814 RHBDL3P58872 404 aa16.59■□□□□ 0.25
CTSA-218ENST00000607814 TREML2Q5T2D2 321 aa16.59■□□□□ 0.25
CTSA-218ENST00000607814 NAA16Q6N069 864 aaPredicted RBP16.59■□□□□ 0.25
CTSA-218ENST00000607814 SH3RF3Q8TEJ3 882 aaPredicted RBP16.59■□□□□ 0.25
CTSA-218ENST00000607814 EDC3Q96F86 508 aaKnown RBP16.59■□□□□ 0.25
CTSA-218ENST00000607814 UBE2OQ9C0C9 1292 aaKnown RBP16.59■□□□□ 0.25
CTSA-218ENST00000607814 OSBPL5Q9H0X9 879 aaPredicted RBP16.59■□□□□ 0.25
CTSA-218ENST00000607814 AATFQ9NY61 560 aaKnown RBP eCLIP16.59■□□□□ 0.25
CTSA-218ENST00000607814 DNAH12Q6ZR08 3092 aa16.59■□□□□ 0.25
CTSA-218ENST00000607814 MYO5AQ9Y4I1 1855 aaKnown RBP16.59■□□□□ 0.25
CTSA-218ENST00000607814 RAB11FIP3O75154 756 aa16.58■□□□□ 0.24
CTSA-218ENST00000607814 IDH1O75874 414 aaKnown RBP16.58■□□□□ 0.24
CTSA-218ENST00000607814 MAP4K4O95819 1239 aaPredicted RBP16.58■□□□□ 0.24
CTSA-218ENST00000607814 MAP3K21Q5TCX8 1036 aa16.58■□□□□ 0.24
CTSA-218ENST00000607814 ZNF280CQ8ND82 737 aa16.58■□□□□ 0.24
CTSA-218ENST00000607814 ZNF512BQ96KM6 892 aaPredicted RBP16.58■□□□□ 0.24
CTSA-218ENST00000607814 DDX60LQ5H9U9 1706 aaKnown RBP16.58■□□□□ 0.24
CTSA-218ENST00000607814 LOC285556D6RIA3 1793 aa16.58■□□□□ 0.24
CTSA-218ENST00000607814 LDHCP07864 332 aa16.57■□□□□ 0.24
CTSA-218ENST00000607814 XRCC5P13010 732 aaKnown RBP16.57■□□□□ 0.24
CTSA-218ENST00000607814 SYN1P17600 705 aa16.57■□□□□ 0.24
CTSA-218ENST00000607814 DYNLL1P63167 89 aaKnown RBP16.57■□□□□ 0.24
CTSA-218ENST00000607814 GSTO1P78417 241 aa16.57■□□□□ 0.24
CTSA-218ENST00000607814 FAM109BQ6ICB4 259 aaPredicted RBP16.57■□□□□ 0.24
CTSA-218ENST00000607814 TRMT44Q8IYL2 757 aaKnown RBP16.57■□□□□ 0.24
CTSA-218ENST00000607814 BOLA2Q9H3K6 86 aa16.57■□□□□ 0.24
CTSA-218ENST00000607814 MORF4L1Q9UBU8 362 aa16.57■□□□□ 0.24
CTSA-218ENST00000607814 COL2A1P02458 1487 aaPredicted RBP16.56■□□□□ 0.24
CTSA-218ENST00000607814 FAM196BA6NMK8 535 aa16.56■□□□□ 0.24
CTSA-218ENST00000607814 CYP7A1P22680 504 aa16.56■□□□□ 0.24
CTSA-218ENST00000607814 SPP2Q13103 211 aa16.56■□□□□ 0.24
CTSA-218ENST00000607814 SH3D19Q5HYK7 790 aa16.56■□□□□ 0.24
CTSA-218ENST00000607814 MAGEB6Q8N7X4 407 aa16.56■□□□□ 0.24
CTSA-218ENST00000607814 MIGA1Q8NAN2 632 aa16.56■□□□□ 0.24
CTSA-218ENST00000607814 SOCS4Q8WXH5 440 aa16.56■□□□□ 0.24
CTSA-218ENST00000607814 DNAJC2Q99543 621 aaKnown RBP16.56■□□□□ 0.24
CTSA-218ENST00000607814 ASCC2Q9H1I8 757 aaPredicted RBP16.56■□□□□ 0.24
CTSA-218ENST00000607814 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.56■□□□□ 0.24
CTSA-218ENST00000607814 SPTBN5Q9NRC6 3674 aaKnown RBP16.56■□□□□ 0.24
CTSA-218ENST00000607814 COL6A1P12109 1028 aa16.55■□□□□ 0.24
CTSA-218ENST00000607814 SLFNL1Q499Z3 407 aa16.55■□□□□ 0.24
CTSA-218ENST00000607814 TEX11Q8IYF3 940 aa16.55■□□□□ 0.24
CTSA-218ENST00000607814 TRIB2Q92519 343 aa16.55■□□□□ 0.24
CTSA-218ENST00000607814 COL25A1Q9BXS0 654 aaPredicted RBP16.55■□□□□ 0.24
CTSA-218ENST00000607814 LRRCC1Q9C099 1032 aa16.55■□□□□ 0.24
CTSA-218ENST00000607814 PFASO15067 1338 aa16.54■□□□□ 0.24
CTSA-218ENST00000607814 USP17L5A8MUK1 530 aa16.54■□□□□ 0.24
CTSA-218ENST00000607814 POTEB2H3BUK9 544 aa16.54■□□□□ 0.24
CTSA-218ENST00000607814 GOLIM4O00461 696 aa16.54■□□□□ 0.24
CTSA-218ENST00000607814 HMGCS2P54868 508 aa16.54■□□□□ 0.24
CTSA-218ENST00000607814 TRIM32Q13049 653 aa16.54■□□□□ 0.24
CTSA-218ENST00000607814 TSHZ3Q63HK5 1081 aa16.54■□□□□ 0.24
CTSA-218ENST00000607814 CCDC84Q86UT8 332 aaPredicted RBP16.54■□□□□ 0.24
CTSA-218ENST00000607814 MAPKAPK5Q8IW41 473 aa16.54■□□□□ 0.24
CTSA-218ENST00000607814 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.54■□□□□ 0.24
CTSA-218ENST00000607814 TGFBRAP1Q8WUH2 860 aa16.54■□□□□ 0.24
CTSA-218ENST00000607814 NUDT12Q9BQG2 462 aa16.54■□□□□ 0.24
CTSA-218ENST00000607814 DCTPP1Q9H773 170 aa16.54■□□□□ 0.24
CTSA-218ENST00000607814 AS3MTQ9HBK9 375 aa16.54■□□□□ 0.24
CTSA-218ENST00000607814 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.54■□□□□ 0.24
CTSA-218ENST00000607814 CHGBP05060 677 aa16.53■□□□□ 0.24
CTSA-218ENST00000607814 PRKAR2AP13861 404 aaKnown RBP16.53■□□□□ 0.24
CTSA-218ENST00000607814 CAP2P40123 477 aa16.53■□□□□ 0.24
CTSA-218ENST00000607814 NOL10Q9BSC4 688 aaKnown RBP16.53■□□□□ 0.24
CTSA-218ENST00000607814 HERC5Q9UII4 1024 aaKnown RBP16.53■□□□□ 0.24
CTSA-218ENST00000607814 TTC28Q96AY4 2481 aa16.53■□□□□ 0.24
CTSA-218ENST00000607814 PLXNB2O15031 1838 aa16.52■□□□□ 0.24
CTSA-218ENST00000607814 HOXA7P31268 230 aaPredicted RBP16.52■□□□□ 0.24
CTSA-218ENST00000607814 WDR18Q9BV38 432 aa16.52■□□□□ 0.24
CTSA-218ENST00000607814 SAP30BPQ9UHR5 308 aaKnown RBP16.52■□□□□ 0.24
CTSA-218ENST00000607814 EYSQ5T1H1 3165 aa16.52■□□□□ 0.23
CTSA-218ENST00000607814 BAG3O95817 575 aa16.51■□□□□ 0.23
CTSA-218ENST00000607814 CYP2B6P20813 491 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms