RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 TAOK2Q9UL54 1235 aa19.9■□□□□ 0.78
LINC00240-203ENST00000606878 USP17L12C9JPN9 530 aa19.89■□□□□ 0.77
LINC00240-203ENST00000606878 USP17L21D6R901 530 aa19.89■□□□□ 0.77
LINC00240-203ENST00000606878 JAG1P78504 1218 aa19.89■□□□□ 0.77
LINC00240-203ENST00000606878 PKN2Q16513 984 aaKnown RBP19.89■□□□□ 0.77
LINC00240-203ENST00000606878 GPAT2Q6NUI2 795 aa19.89■□□□□ 0.77
LINC00240-203ENST00000606878 ABHD8Q96I13 439 aa19.89■□□□□ 0.77
LINC00240-203ENST00000606878 CABP5Q9NP86 173 aa19.89■□□□□ 0.77
LINC00240-203ENST00000606878 ZBTB21Q9ULJ3 1066 aa19.89■□□□□ 0.77
LINC00240-203ENST00000606878 GH2P01242 217 aa19.88■□□□□ 0.77
LINC00240-203ENST00000606878 GNAT2P19087 354 aa19.88■□□□□ 0.77
LINC00240-203ENST00000606878 GABPAQ06546 454 aa19.88■□□□□ 0.77
LINC00240-203ENST00000606878 ARHGEF6Q15052 776 aa19.88■□□□□ 0.77
LINC00240-203ENST00000606878 ABCB5Q2M3G0 1257 aa19.88■□□□□ 0.77
LINC00240-203ENST00000606878 SLC45A1Q9Y2W3 748 aa19.88■□□□□ 0.77
LINC00240-203ENST00000606878 C19orf81C9J6K1 198 aa19.87■□□□□ 0.77
LINC00240-203ENST00000606878 CYP2D6P10635 497 aa19.87■□□□□ 0.77
LINC00240-203ENST00000606878 SHMT1P34896 483 aa19.87■□□□□ 0.77
LINC00240-203ENST00000606878 C12orf60Q5U649 245 aa19.87■□□□□ 0.77
LINC00240-203ENST00000606878 GIMAP6Q6P9H5 292 aa19.87■□□□□ 0.77
LINC00240-203ENST00000606878 PARK7Q99497 189 aaKnown RBP19.87■□□□□ 0.77
LINC00240-203ENST00000606878 SWAP70Q9UH65 585 aa19.87■□□□□ 0.77
LINC00240-203ENST00000606878 USP17L10C9JJH3 530 aa19.86■□□□□ 0.77
LINC00240-203ENST00000606878 GPAA1O43292 621 aa19.86■□□□□ 0.77
LINC00240-203ENST00000606878 CAPN15O75808 1086 aa19.86■□□□□ 0.77
LINC00240-203ENST00000606878 APPP05067 770 aa19.86■□□□□ 0.77
LINC00240-203ENST00000606878 HMGCS2P54868 508 aa19.86■□□□□ 0.77
LINC00240-203ENST00000606878 BACE1P56817 501 aa19.86■□□□□ 0.77
LINC00240-203ENST00000606878 ZMYM1Q5SVZ6 1142 aa19.86■□□□□ 0.77
LINC00240-203ENST00000606878 CTR9Q6PD62 1173 aa19.86■□□□□ 0.77
LINC00240-203ENST00000606878 TICAM2Q86XR7 235 aa19.86■□□□□ 0.77
LINC00240-203ENST00000606878 PLEKHM2Q8IWE5 1019 aa19.86■□□□□ 0.77
LINC00240-203ENST00000606878 PROCA1Q8NCQ7 364 aaPredicted RBP19.86■□□□□ 0.77
LINC00240-203ENST00000606878 TMOD4Q9NZQ9 345 aa19.86■□□□□ 0.77
LINC00240-203ENST00000606878 AGTPBP1Q9UPW5 1226 aa19.86■□□□□ 0.77
LINC00240-203ENST00000606878 GSG1L2A8MUP6 293 aa19.85■□□□□ 0.77
LINC00240-203ENST00000606878 TRIM6-TRIM34B2RNG4 842 aa19.85■□□□□ 0.77
LINC00240-203ENST00000606878 PATL2C9JE40 543 aaKnown RBP19.85■□□□□ 0.77
LINC00240-203ENST00000606878 M0R2C6 588 aa19.85■□□□□ 0.77
LINC00240-203ENST00000606878 PABPC4Q13310 644 aaKnown RBP eCLIP19.85■□□□□ 0.77
LINC00240-203ENST00000606878 KIF22Q14807 665 aa19.85■□□□□ 0.77
LINC00240-203ENST00000606878 RAB3GAP1Q15042 981 aa19.85■□□□□ 0.77
LINC00240-203ENST00000606878 SH3D19Q5HYK7 790 aa19.85■□□□□ 0.77
LINC00240-203ENST00000606878 C17orf99Q6UX52 265 aa19.85■□□□□ 0.77
LINC00240-203ENST00000606878 DYNLL2Q96FJ2 89 aa19.85■□□□□ 0.77
LINC00240-203ENST00000606878 OSBPL3Q9H4L5 887 aa19.85■□□□□ 0.77
LINC00240-203ENST00000606878 CYP2C8P10632 490 aa19.84■□□□□ 0.77
LINC00240-203ENST00000606878 SHROOM1Q2M3G4 852 aaPredicted RBP19.84■□□□□ 0.77
LINC00240-203ENST00000606878 SBK1Q52WX2 424 aa19.84■□□□□ 0.77
LINC00240-203ENST00000606878 CD99L2Q8TCZ2 262 aa19.84■□□□□ 0.77
LINC00240-203ENST00000606878 SEC62Q99442 399 aaKnown RBP19.84■□□□□ 0.77
LINC00240-203ENST00000606878 NACAP1Q9BZK3 213 aa19.84■□□□□ 0.77
LINC00240-203ENST00000606878 EFCC1Q9HA90 598 aa19.84■□□□□ 0.77
LINC00240-203ENST00000606878 ARPP21Q9UBL0 812 aaPredicted RBP19.84■□□□□ 0.77
LINC00240-203ENST00000606878 CPA4Q9UI42 421 aa19.84■□□□□ 0.77
LINC00240-203ENST00000606878 TRIM17Q9Y577 477 aa19.84■□□□□ 0.77
LINC00240-203ENST00000606878 MYH1P12882 1939 aa19.83■□□□□ 0.77
LINC00240-203ENST00000606878 CYP2D7A0A087X1C5 515 aa19.83■□□□□ 0.77
LINC00240-203ENST00000606878 MPHOSPH10O00566 681 aaKnown RBP19.83■□□□□ 0.77
LINC00240-203ENST00000606878 CDK8P49336 464 aa19.83■□□□□ 0.77
LINC00240-203ENST00000606878 EVX2Q03828 476 aa19.83■□□□□ 0.77
LINC00240-203ENST00000606878 MTMR2Q13614 643 aa19.83■□□□□ 0.77
LINC00240-203ENST00000606878 RILPL2Q969X0 211 aa19.83■□□□□ 0.77
LINC00240-203ENST00000606878 CCDC17Q96LX7 622 aa19.83■□□□□ 0.77
LINC00240-203ENST00000606878 PNMA3Q9UL41 463 aa19.83■□□□□ 0.77
LINC00240-203ENST00000606878 CDK5RAP2Q96SN8 1893 aa19.83■□□□□ 0.76
LINC00240-203ENST00000606878 FOCADQ5VW36 1801 aa19.82■□□□□ 0.76
LINC00240-203ENST00000606878 MINDY4BA8MYZ0 360 aa19.82■□□□□ 0.76
LINC00240-203ENST00000606878 OSBPP22059 807 aa19.82■□□□□ 0.76
LINC00240-203ENST00000606878 TDO2P48775 406 aa19.82■□□□□ 0.76
LINC00240-203ENST00000606878 TREML2Q5T2D2 321 aa19.82■□□□□ 0.76
LINC00240-203ENST00000606878 FBXO46Q6PJ61 603 aaPredicted RBP19.82■□□□□ 0.76
LINC00240-203ENST00000606878 USP17L2Q6R6M4 530 aa19.82■□□□□ 0.76
LINC00240-203ENST00000606878 OTOP1Q7RTM1 612 aa19.82■□□□□ 0.76
LINC00240-203ENST00000606878 SLC44A5Q8NCS7 719 aa19.82■□□□□ 0.76
LINC00240-203ENST00000606878 SMCR8Q8TEV9 937 aaPredicted RBP19.82■□□□□ 0.76
LINC00240-203ENST00000606878 HELLSQ9NRZ9 838 aa19.82■□□□□ 0.76
LINC00240-203ENST00000606878 LAMB1P07942 1786 aa19.81■□□□□ 0.76
LINC00240-203ENST00000606878 CCDC85CA6NKD9 419 aa19.81■□□□□ 0.76
LINC00240-203ENST00000606878 C16orf86Q6ZW13 317 aa19.81■□□□□ 0.76
LINC00240-203ENST00000606878 IFNL3Q8IZI9 196 aa19.81■□□□□ 0.76
LINC00240-203ENST00000606878 FEZ1Q99689 392 aa19.81■□□□□ 0.76
LINC00240-203ENST00000606878 DOCK1Q14185 1865 aa19.8■□□□□ 0.76
LINC00240-203ENST00000606878 USP14P54578 494 aa19.8■□□□□ 0.76
LINC00240-203ENST00000606878 LACTBP83111 547 aaPredicted RBP19.8■□□□□ 0.76
LINC00240-203ENST00000606878 SEPT2Q15019 361 aa19.8■□□□□ 0.76
LINC00240-203ENST00000606878 TMEM179Q6ZVK1 233 aa19.8■□□□□ 0.76
LINC00240-203ENST00000606878 SIPA1L1O43166 1804 aa19.79■□□□□ 0.76
LINC00240-203ENST00000606878 SMIM22K7EJ46 135 aa19.79■□□□□ 0.76
LINC00240-203ENST00000606878 GNRH1P01148 92 aa19.79■□□□□ 0.76
LINC00240-203ENST00000606878 HOXA7P31268 230 aaPredicted RBP19.79■□□□□ 0.76
LINC00240-203ENST00000606878 GUCY1A2P33402 732 aa19.79■□□□□ 0.76
LINC00240-203ENST00000606878 MCMDC2Q4G0Z9 681 aa19.79■□□□□ 0.76
LINC00240-203ENST00000606878 KIAA1683Q9H0B3 1180 aa19.79■□□□□ 0.76
LINC00240-203ENST00000606878 MKNK2Q9HBH9 465 aa19.79■□□□□ 0.76
LINC00240-203ENST00000606878 ZNF287Q9HBT7 754 aa19.79■□□□□ 0.76
LINC00240-203ENST00000606878 EMILIN3Q9NT22 766 aa19.79■□□□□ 0.76
LINC00240-203ENST00000606878 ADGRA2Q96PE1 1338 aa19.78■□□□□ 0.76
LINC00240-203ENST00000606878 BCRP11274 1271 aa19.78■□□□□ 0.76
LINC00240-203ENST00000606878 AKR1B1P15121 316 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms