RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 CAP2P40123 477 aa6.24□□□□□ -1.41
RNU6-88P-201ENST00000606801 GIPRP48546 466 aa6.24□□□□□ -1.41
RNU6-88P-201ENST00000606801 HID1Q8IV36 788 aa6.24□□□□□ -1.41
RNU6-88P-201ENST00000606801 MRPL41Q8IXM3 137 aaKnown RBP6.24□□□□□ -1.41
RNU6-88P-201ENST00000606801 FAM169BQ8N8A8 192 aa6.24□□□□□ -1.41
RNU6-88P-201ENST00000606801 RBBP8NLQ8NC74 664 aaPredicted RBP6.24□□□□□ -1.41
RNU6-88P-201ENST00000606801 GATA6Q92908 595 aa6.24□□□□□ -1.41
RNU6-88P-201ENST00000606801 TMEM87BQ96K49 555 aa6.24□□□□□ -1.41
RNU6-88P-201ENST00000606801 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.24□□□□□ -1.41
RNU6-88P-201ENST00000606801 SRRTQ9BXP5 876 aaKnown RBP6.24□□□□□ -1.41
RNU6-88P-201ENST00000606801 KCNF1Q9H3M0 494 aa6.24□□□□□ -1.41
RNU6-88P-201ENST00000606801 C7orf69Q9H7B7 122 aa6.24□□□□□ -1.41
RNU6-88P-201ENST00000606801 PIDD1Q9HB75 910 aa6.24□□□□□ -1.41
RNU6-88P-201ENST00000606801 LGR6Q9HBX8 967 aa6.24□□□□□ -1.41
RNU6-88P-201ENST00000606801 RNF112Q9ULX5 631 aa6.24□□□□□ -1.41
RNU6-88P-201ENST00000606801 MEIS3P2A8K0S8 358 aa6.23□□□□□ -1.41
RNU6-88P-201ENST00000606801 PDE4BQ07343 736 aa6.23□□□□□ -1.41
RNU6-88P-201ENST00000606801 RUFY4Q6ZNE9 571 aa6.23□□□□□ -1.41
RNU6-88P-201ENST00000606801 BEND4Q6ZU67 534 aa6.23□□□□□ -1.41
RNU6-88P-201ENST00000606801 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.23□□□□□ -1.41
RNU6-88P-201ENST00000606801 SREK1Q8WXA9 508 aaKnown RBP6.23□□□□□ -1.41
RNU6-88P-201ENST00000606801 ATG4CQ96DT6 458 aa6.23□□□□□ -1.41
RNU6-88P-201ENST00000606801 TANGO6Q9C0B7 1094 aa6.23□□□□□ -1.41
RNU6-88P-201ENST00000606801 DAGLAQ9Y4D2 1042 aa6.23□□□□□ -1.41
RNU6-88P-201ENST00000606801 MRVI1Q9Y6F6 885 aa6.23□□□□□ -1.41
RNU6-88P-201ENST00000606801 FAM95CA0A1B0GW59 222 aa6.22□□□□□ -1.41
RNU6-88P-201ENST00000606801 IGSF3O75054 1194 aa6.22□□□□□ -1.41
RNU6-88P-201ENST00000606801 NFIAQ12857 509 aa6.22□□□□□ -1.41
RNU6-88P-201ENST00000606801 CDCP2Q5VXM1 449 aa6.22□□□□□ -1.41
RNU6-88P-201ENST00000606801 RNF43Q68DV7 783 aa6.22□□□□□ -1.41
RNU6-88P-201ENST00000606801 SLC6A19Q695T7 634 aa6.22□□□□□ -1.41
RNU6-88P-201ENST00000606801 OVOS1Q6IE37 1185 aa6.22□□□□□ -1.41
RNU6-88P-201ENST00000606801 LSRQ86X29 649 aaPredicted RBP6.22□□□□□ -1.41
RNU6-88P-201ENST00000606801 DHX38Q92620 1227 aaKnown RBP6.22□□□□□ -1.41
RNU6-88P-201ENST00000606801 FERD3LQ96RJ6 166 aa6.22□□□□□ -1.41
RNU6-88P-201ENST00000606801 DPH2Q9BQC3 489 aaPredicted RBP6.22□□□□□ -1.41
RNU6-88P-201ENST00000606801 ZNF408Q9H9D4 720 aa6.22□□□□□ -1.41
RNU6-88P-201ENST00000606801 PICK1Q9NRD5 415 aa6.22□□□□□ -1.41
RNU6-88P-201ENST00000606801 CST3P01034 146 aaPredicted RBP6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 ACRP10323 421 aa6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 RXRBP28702 533 aa6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 ADMP35318 185 aa6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 EIF6P56537 245 aaKnown RBP6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 NFKBIBQ15653 356 aa6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 ARTNQ5T4W7 220 aa6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 PRAMEF13Q5VWM6 474 aa6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 DIEXFQ68CQ4 756 aaKnown RBP6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 KCT2Q8NC54 265 aa6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 RIN3Q8TB24 985 aa6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 PPP1R13LQ8WUF5 828 aa6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 TMEM40Q8WWA1 233 aa6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 FOXQ1Q9C009 403 aa6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 CNNM2Q9H8M5 875 aa6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 SSU72Q9NP77 194 aaKnown RBP6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 KLHL3Q9UH77 587 aa6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 CNTNAP4Q9C0A0 1308 aa6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 COL17A1Q9UMD9 1497 aaPredicted RBP6.21□□□□□ -1.42
RNU6-88P-201ENST00000606801 SCO2A0A1W2PP80 73 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 NME1P15531 152 aaKnown RBP6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 ATP2B1P20020 1258 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 RBL2Q08999 1139 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 CDK5R2Q13319 367 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 LRP8Q14114 963 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 MAP7Q14244 749 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 ARSHQ5FYA8 562 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 XP32Q5T750 250 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 FBXW10Q5XX13 1052 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 CDC37L1Q7L3B6 337 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 ARMCX6Q7L4S7 300 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 FAM214BQ7L5A3 538 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 SLFN12Q8IYM2 578 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 FAM13CQ8NE31 585 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 DRC1Q96MC2 740 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 DBNDD2Q9BQY9 259 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 GMIPQ9P107 970 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 STRIP2Q9ULQ0 834 aa6.2□□□□□ -1.42
RNU6-88P-201ENST00000606801 TNFRSF10CO14798 259 aa6.19□□□□□ -1.42
RNU6-88P-201ENST00000606801 LEFTY1O75610 366 aa6.19□□□□□ -1.42
RNU6-88P-201ENST00000606801 LRIG2O94898 1065 aa6.19□□□□□ -1.42
RNU6-88P-201ENST00000606801 SLITRK5O94991 958 aa6.19□□□□□ -1.42
RNU6-88P-201ENST00000606801 SSBP05455 408 aaKnown RBP eCLIP6.19□□□□□ -1.42
RNU6-88P-201ENST00000606801 IMPDH2P12268 514 aa6.19□□□□□ -1.42
RNU6-88P-201ENST00000606801 POLR2BP30876 1174 aaKnown RBP6.19□□□□□ -1.42
RNU6-88P-201ENST00000606801 ZYXQ15942 572 aaKnown RBP6.19□□□□□ -1.42
RNU6-88P-201ENST00000606801 NLRC3Q7RTR2 1065 aa6.19□□□□□ -1.42
RNU6-88P-201ENST00000606801 ZDHHC13Q8IUH4 622 aa6.19□□□□□ -1.42
RNU6-88P-201ENST00000606801 CPLX3Q8WVH0 158 aa6.19□□□□□ -1.42
RNU6-88P-201ENST00000606801 ANAPC16Q96DE5 110 aa6.19□□□□□ -1.42
RNU6-88P-201ENST00000606801 SLC9A7Q96T83 725 aa6.19□□□□□ -1.42
RNU6-88P-201ENST00000606801 TNKS2Q9H2K2 1166 aa6.19□□□□□ -1.42
RNU6-88P-201ENST00000606801 ZFP64Q9NPA5 681 aa6.19□□□□□ -1.42
RNU6-88P-201ENST00000606801 PRR19A6NJB7 356 aa6.18□□□□□ -1.42
RNU6-88P-201ENST00000606801 SMAD7O15105 426 aaKnown RBP6.18□□□□□ -1.42
RNU6-88P-201ENST00000606801 KLF4O43474 513 aa6.18□□□□□ -1.42
RNU6-88P-201ENST00000606801 HYAL3O43820 417 aaPredicted RBP6.18□□□□□ -1.42
RNU6-88P-201ENST00000606801 UBOX5O94941 541 aa6.18□□□□□ -1.42
RNU6-88P-201ENST00000606801 EOMESO95936 686 aa6.18□□□□□ -1.42
RNU6-88P-201ENST00000606801 GTF2F1P35269 517 aaKnown RBP eCLIP6.18□□□□□ -1.42
RNU6-88P-201ENST00000606801 SF3A1Q15459 793 aaKnown RBP6.18□□□□□ -1.42
RNU6-88P-201ENST00000606801 LRRFIP1Q32MZ4 808 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms