RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 FAM47AQ5JRC9 791 aa9.1□□□□□ -0.95
MSH6-211ENST00000606499 CST9Q5W186 159 aa9.1□□□□□ -0.95
MSH6-211ENST00000606499 MFSD6Q6ZSS7 791 aa9.1□□□□□ -0.95
MSH6-211ENST00000606499 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.1□□□□□ -0.95
MSH6-211ENST00000606499 KCNB2Q92953 911 aa9.1□□□□□ -0.95
MSH6-211ENST00000606499 ZKSCAN4Q969J2 545 aaPredicted RBP9.1□□□□□ -0.95
MSH6-211ENST00000606499 KLRG1Q96E93 195 aa9.1□□□□□ -0.95
MSH6-211ENST00000606499 C22orf23Q9BZE7 217 aa9.1□□□□□ -0.95
MSH6-211ENST00000606499 RNF41Q9H4P4 317 aaPredicted RBP9.1□□□□□ -0.95
MSH6-211ENST00000606499 UPF2Q9HAU5 1272 aaKnown RBP9.1□□□□□ -0.95
MSH6-211ENST00000606499 ANGEL1Q9UNK9 670 aaKnown RBP9.1□□□□□ -0.95
MSH6-211ENST00000606499 UBE2Q2LH0YL09 131 aa9.09□□□□□ -0.95
MSH6-211ENST00000606499 MPHOSPH10O00566 681 aaKnown RBP9.09□□□□□ -0.95
MSH6-211ENST00000606499 PPP1R12BO60237 982 aaPredicted RBP9.09□□□□□ -0.95
MSH6-211ENST00000606499 RANBP6O60518 1105 aaKnown RBP9.09□□□□□ -0.95
MSH6-211ENST00000606499 KDM4AO75164 1064 aa9.09□□□□□ -0.95
MSH6-211ENST00000606499 FGRP09769 529 aa9.09□□□□□ -0.95
MSH6-211ENST00000606499 CPA1P15085 419 aa9.09□□□□□ -0.95
MSH6-211ENST00000606499 FSTL1Q12841 308 aa9.09□□□□□ -0.95
MSH6-211ENST00000606499 CERKLQ49MI3 558 aaPredicted RBP9.09□□□□□ -0.95
MSH6-211ENST00000606499 CYB5R4Q7L1T6 521 aa9.09□□□□□ -0.95
MSH6-211ENST00000606499 RALYLQ86SE5 291 aaKnown RBP9.09□□□□□ -0.95
MSH6-211ENST00000606499 CCDC84Q86UT8 332 aaPredicted RBP9.09□□□□□ -0.95
MSH6-211ENST00000606499 CLEC10AQ8IUN9 316 aa9.09□□□□□ -0.95
MSH6-211ENST00000606499 CLMNQ96JQ2 1002 aa9.09□□□□□ -0.95
MSH6-211ENST00000606499 JAKMIP1Q96N16 626 aaKnown RBP9.09□□□□□ -0.95
MSH6-211ENST00000606499 TBC1D32Q96NH3 1257 aa9.09□□□□□ -0.95
MSH6-211ENST00000606499 CNNM2Q9H8M5 875 aa9.09□□□□□ -0.95
MSH6-211ENST00000606499 ZNF287Q9HBT7 754 aa9.09□□□□□ -0.95
MSH6-211ENST00000606499 GBA2Q9HCG7 927 aaPredicted RBP9.09□□□□□ -0.95
MSH6-211ENST00000606499 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.09□□□□□ -0.95
MSH6-211ENST00000606499 ZNF112Q9UJU3 913 aa9.09□□□□□ -0.95
MSH6-211ENST00000606499 PTPRFP10586 1907 aa9.09□□□□□ -0.95
MSH6-211ENST00000606499 PLIN4Q96Q06 1357 aa9.09□□□□□ -0.95
MSH6-211ENST00000606499 PCNTO95613 3336 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 TSPY2A6NKD2 308 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 NMT2O60551 498 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 GH2P01242 217 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 PCP11498 1178 aaKnown RBP9.08□□□□□ -0.96
MSH6-211ENST00000606499 CASTP20810 708 aaKnown RBP9.08□□□□□ -0.96
MSH6-211ENST00000606499 CAP2P40123 477 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 IREB2P48200 963 aaKnown RBP9.08□□□□□ -0.96
MSH6-211ENST00000606499 RBM25P49756 843 aaKnown RBP9.08□□□□□ -0.96
MSH6-211ENST00000606499 ANTXR2P58335 489 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 TFAP4Q01664 338 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 TRDNQ13061 729 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 VGLL4Q14135 290 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 KRT32Q14532 448 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 ABCB5Q2M3G0 1257 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 TSGA10IPQ3SY00 556 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.08□□□□□ -0.96
MSH6-211ENST00000606499 CHST3Q7LGC8 479 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 MB21D2Q8IYB1 491 aaPredicted RBP9.08□□□□□ -0.96
MSH6-211ENST00000606499 ZNF444Q8N0Y2 327 aaPredicted RBP9.08□□□□□ -0.96
MSH6-211ENST00000606499 C2orf69Q8N8R5 385 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 NCOA7Q8NI08 942 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 ESR2Q92731 530 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 ZKSCAN3Q9BRR0 538 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.08□□□□□ -0.96
MSH6-211ENST00000606499 UPF3BQ9BZI7 483 aaKnown RBP9.08□□□□□ -0.96
MSH6-211ENST00000606499 KRT23Q9C075 422 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 TAOK2Q9UL54 1235 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 ZBTB21Q9ULJ3 1066 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 SNCAIPQ9Y6H5 919 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 LOC285556D6RIA3 1793 aa9.08□□□□□ -0.96
MSH6-211ENST00000606499 CTNND1O60716 968 aaKnown RBP9.07□□□□□ -0.96
MSH6-211ENST00000606499 TSPY3P0CV98 308 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 TSPY8P0CW00 308 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 GUCY1A2P33402 732 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 ANAPC15P60006 121 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 SEPT2Q15019 361 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 RAB3GAP1Q15042 981 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 MAP3K11Q16584 847 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 LDLRAD1Q5T700 205 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 TMEM179Q6ZVK1 233 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 ARMC9Q7Z3E5 817 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 ANKRD13AQ8IZ07 590 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 SCYL3Q8IZE3 742 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 CCDC17Q96LX7 622 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 TCEANC2Q96MN5 208 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 NEK1Q96PY6 1258 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 KIF2CQ99661 725 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 ELP3Q9H9T3 547 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 ZSWIM5Q9P217 1185 aa9.07□□□□□ -0.96
MSH6-211ENST00000606499 TNKSO95271 1327 aa9.06□□□□□ -0.96
MSH6-211ENST00000606499 IGKV6D-41A0A0C4DH26 115 aa9.06□□□□□ -0.96
MSH6-211ENST00000606499 PRC1O43663 620 aa9.06□□□□□ -0.96
MSH6-211ENST00000606499 ASNSP08243 561 aa9.06□□□□□ -0.96
MSH6-211ENST00000606499 HUNKP57058 714 aa9.06□□□□□ -0.96
MSH6-211ENST00000606499 FKBP1BP68106 108 aa9.06□□□□□ -0.96
MSH6-211ENST00000606499 MAP3K9P80192 1104 aa9.06□□□□□ -0.96
MSH6-211ENST00000606499 NOL9Q5SY16 702 aaKnown RBP9.06□□□□□ -0.96
MSH6-211ENST00000606499 BLOC1S2Q6QNY1 142 aa9.06□□□□□ -0.96
MSH6-211ENST00000606499 NEDD1Q8NHV4 660 aa9.06□□□□□ -0.96
MSH6-211ENST00000606499 IL17RAQ96F46 866 aa9.06□□□□□ -0.96
MSH6-211ENST00000606499 CEP95Q96GE4 821 aa9.06□□□□□ -0.96
MSH6-211ENST00000606499 LRRC2Q9BYS8 371 aa9.06□□□□□ -0.96
MSH6-211ENST00000606499 CABP5Q9NP86 173 aa9.06□□□□□ -0.96
MSH6-211ENST00000606499 GPHNQ9NQX3 736 aaPredicted RBP9.06□□□□□ -0.96
MSH6-211ENST00000606499 IL17RBQ9NRM6 502 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms