RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 ZBTB21Q9ULJ3 1066 aa12.93□□□□□ -0.34
TUBE1-210ENST00000604967 MKI67P46013 3256 aaKnown RBP12.92□□□□□ -0.34
TUBE1-210ENST00000604967 USP17L5A8MUK1 530 aa12.92□□□□□ -0.34
TUBE1-210ENST00000604967 M0R2C6 588 aa12.92□□□□□ -0.34
TUBE1-210ENST00000604967 GH2P01242 217 aa12.92□□□□□ -0.34
TUBE1-210ENST00000604967 LACTBP83111 547 aaPredicted RBP12.92□□□□□ -0.34
TUBE1-210ENST00000604967 UBE3CQ15386 1083 aa12.92□□□□□ -0.34
TUBE1-210ENST00000604967 SH3D19Q5HYK7 790 aa12.92□□□□□ -0.34
TUBE1-210ENST00000604967 KBTBD3Q8NAB2 608 aa12.92□□□□□ -0.34
TUBE1-210ENST00000604967 ERO1AQ96HE7 468 aa12.92□□□□□ -0.34
TUBE1-210ENST00000604967 WDR18Q9BV38 432 aa12.92□□□□□ -0.34
TUBE1-210ENST00000604967 EFCC1Q9HA90 598 aa12.92□□□□□ -0.34
TUBE1-210ENST00000604967 SUPT16HQ9Y5B9 1047 aaKnown RBP12.92□□□□□ -0.34
TUBE1-210ENST00000604967 PTCH2Q9Y6C5 1203 aa12.92□□□□□ -0.34
TUBE1-210ENST00000604967 MYH7P12883 1935 aa12.92□□□□□ -0.34
TUBE1-210ENST00000604967 FOXP2O15409 715 aa12.91□□□□□ -0.34
TUBE1-210ENST00000604967 MTMR2Q13614 643 aa12.91□□□□□ -0.34
TUBE1-210ENST00000604967 PKN2Q16513 984 aaKnown RBP12.91□□□□□ -0.34
TUBE1-210ENST00000604967 TMED8Q6PL24 325 aaPredicted RBP12.91□□□□□ -0.34
TUBE1-210ENST00000604967 CLEC10AQ8IUN9 316 aa12.91□□□□□ -0.34
TUBE1-210ENST00000604967 SIAH1Q8IUQ4 282 aa12.91□□□□□ -0.34
TUBE1-210ENST00000604967 ACER1Q8TDN7 264 aa12.91□□□□□ -0.34
TUBE1-210ENST00000604967 SEC62Q99442 399 aaKnown RBP12.91□□□□□ -0.34
TUBE1-210ENST00000604967 CRNKL1Q9BZJ0 848 aaKnown RBP12.91□□□□□ -0.34
TUBE1-210ENST00000604967 EMILIN3Q9NT22 766 aa12.91□□□□□ -0.34
TUBE1-210ENST00000604967 MCM9Q9NXL9 1143 aa12.91□□□□□ -0.34
TUBE1-210ENST00000604967 SERPINB13Q9UIV8 391 aa12.91□□□□□ -0.34
TUBE1-210ENST00000604967 AGTPBP1Q9UPW5 1226 aa12.91□□□□□ -0.34
TUBE1-210ENST00000604967 BAZ2AQ9UIF9 1905 aaKnown RBP12.91□□□□□ -0.34
TUBE1-210ENST00000604967 HLA-DOAP06340 250 aa12.9□□□□□ -0.34
TUBE1-210ENST00000604967 BACE1P56817 501 aa12.9□□□□□ -0.34
TUBE1-210ENST00000604967 IRX6P78412 446 aaPredicted RBP12.9□□□□□ -0.34
TUBE1-210ENST00000604967 KIAA1755Q5JYT7 1200 aa12.9□□□□□ -0.34
TUBE1-210ENST00000604967 ANKRD45Q5TZF3 282 aa12.9□□□□□ -0.34
TUBE1-210ENST00000604967 FASTKD5Q7L8L6 764 aaKnown RBP12.9□□□□□ -0.34
TUBE1-210ENST00000604967 CERS3Q8IU89 383 aa12.9□□□□□ -0.34
TUBE1-210ENST00000604967 CRACR2BQ8N4Y2 399 aaPredicted RBP12.9□□□□□ -0.34
TUBE1-210ENST00000604967 STRBPQ96SI9 672 aaKnown RBP12.9□□□□□ -0.34
TUBE1-210ENST00000604967 EPB41L4AQ9HCS5 686 aaPredicted RBP12.9□□□□□ -0.34
TUBE1-210ENST00000604967 A0A1W2PRG0 241 aa12.89□□□□□ -0.35
TUBE1-210ENST00000604967 POTEFA5A3E0 1075 aa12.89□□□□□ -0.35
TUBE1-210ENST00000604967 GSG1L2A8MUP6 293 aa12.89□□□□□ -0.35
TUBE1-210ENST00000604967 ASNSP08243 561 aa12.89□□□□□ -0.35
TUBE1-210ENST00000604967 SMC5Q8IY18 1101 aa12.89□□□□□ -0.35
TUBE1-210ENST00000604967 ASCC2Q9H1I8 757 aaPredicted RBP12.89□□□□□ -0.35
TUBE1-210ENST00000604967 STAP2Q9UGK3 403 aa12.89□□□□□ -0.35
TUBE1-210ENST00000604967 GABRQQ9UN88 632 aa12.89□□□□□ -0.35
TUBE1-210ENST00000604967 SLC45A1Q9Y2W3 748 aa12.89□□□□□ -0.35
TUBE1-210ENST00000604967 TTC41PQ6P2S7 1318 aa12.88□□□□□ -0.35
TUBE1-210ENST00000604967 USP17L12C9JPN9 530 aa12.88□□□□□ -0.35
TUBE1-210ENST00000604967 USP17L21D6R901 530 aa12.88□□□□□ -0.35
TUBE1-210ENST00000604967 RNF113AO15541 343 aaKnown RBP12.88□□□□□ -0.35
TUBE1-210ENST00000604967 POLR3DP05423 398 aaPredicted RBP12.88□□□□□ -0.35
TUBE1-210ENST00000604967 MX1P20591 662 aa12.88□□□□□ -0.35
TUBE1-210ENST00000604967 OSBPP22059 807 aa12.88□□□□□ -0.35
TUBE1-210ENST00000604967 PSMC4P43686 418 aa12.88□□□□□ -0.35
TUBE1-210ENST00000604967 SEPT2Q15019 361 aa12.88□□□□□ -0.35
TUBE1-210ENST00000604967 C12orf60Q5U649 245 aa12.88□□□□□ -0.35
TUBE1-210ENST00000604967 CTR9Q6PD62 1173 aa12.88□□□□□ -0.35
TUBE1-210ENST00000604967 PROCA1Q8NCQ7 364 aaPredicted RBP12.88□□□□□ -0.35
TUBE1-210ENST00000604967 ARMC5Q96C12 935 aa12.88□□□□□ -0.35
TUBE1-210ENST00000604967 PARK7Q99497 189 aaKnown RBP12.88□□□□□ -0.35
TUBE1-210ENST00000604967 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.88□□□□□ -0.35
TUBE1-210ENST00000604967 TXNRD2Q9NNW7 524 aa12.88□□□□□ -0.35
TUBE1-210ENST00000604967 AKR1B1P15121 316 aa12.87□□□□□ -0.35
TUBE1-210ENST00000604967 PDE1AP54750 535 aa12.87□□□□□ -0.35
TUBE1-210ENST00000604967 ABCB5Q2M3G0 1257 aa12.87□□□□□ -0.35
TUBE1-210ENST00000604967 CERKLQ49MI3 558 aaPredicted RBP12.87□□□□□ -0.35
TUBE1-210ENST00000604967 TTC6Q86TZ1 520 aa12.87□□□□□ -0.35
TUBE1-210ENST00000604967 ANKRD13CQ8N6S4 541 aa12.87□□□□□ -0.35
TUBE1-210ENST00000604967 SH3TC2Q8TF17 1288 aa12.87□□□□□ -0.35
TUBE1-210ENST00000604967 APPBP2Q92624 585 aa12.87□□□□□ -0.35
TUBE1-210ENST00000604967 P2RX7Q99572 595 aaKnown RBP12.87□□□□□ -0.35
TUBE1-210ENST00000604967 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.87□□□□□ -0.35
TUBE1-210ENST00000604967 TACC3Q9Y6A5 838 aa12.87□□□□□ -0.35
TUBE1-210ENST00000604967 SLC4A4Q9Y6R1 1079 aa12.87□□□□□ -0.35
TUBE1-210ENST00000604967 USP17L10C9JJH3 530 aa12.86□□□□□ -0.35
TUBE1-210ENST00000604967 HOXA7P31268 230 aaPredicted RBP12.86□□□□□ -0.35
TUBE1-210ENST00000604967 CDK8P49336 464 aa12.86□□□□□ -0.35
TUBE1-210ENST00000604967 PRKCZQ05513 592 aa12.86□□□□□ -0.35
TUBE1-210ENST00000604967 RAB3GAP1Q15042 981 aa12.86□□□□□ -0.35
TUBE1-210ENST00000604967 ZYXQ15942 572 aaKnown RBP12.86□□□□□ -0.35
TUBE1-210ENST00000604967 ZMYM1Q5SVZ6 1142 aa12.86□□□□□ -0.35
TUBE1-210ENST00000604967 B4GALNT3Q6L9W6 998 aa12.86□□□□□ -0.35
TUBE1-210ENST00000604967 CCDC129Q6ZRS4 1044 aa12.86□□□□□ -0.35
TUBE1-210ENST00000604967 ZNF333Q96JL9 665 aa12.86□□□□□ -0.35
TUBE1-210ENST00000604967 LNPKQ9C0E8 428 aa12.86□□□□□ -0.35
TUBE1-210ENST00000604967 ATP8A2Q9NTI2 1148 aa12.86□□□□□ -0.35
TUBE1-210ENST00000604967 SRRDQ9UH36 339 aa12.86□□□□□ -0.35
TUBE1-210ENST00000604967 MGAMO43451 1857 aa12.85□□□□□ -0.35
TUBE1-210ENST00000604967 GPAA1O43292 621 aa12.85□□□□□ -0.35
TUBE1-210ENST00000604967 CNMDO75829 334 aa12.85□□□□□ -0.35
TUBE1-210ENST00000604967 GLRX3O76003 335 aaKnown RBP12.85□□□□□ -0.35
TUBE1-210ENST00000604967 Q3C1V9 767 aa12.85□□□□□ -0.35
TUBE1-210ENST00000604967 C16orf86Q6ZW13 317 aa12.85□□□□□ -0.35
TUBE1-210ENST00000604967 GCC1Q96CN9 775 aa12.85□□□□□ -0.35
TUBE1-210ENST00000604967 C12orf42Q96LP6 360 aa12.85□□□□□ -0.35
TUBE1-210ENST00000604967 TRIM34Q9BYJ4 488 aa12.85□□□□□ -0.35
TUBE1-210ENST00000604967 TBC1D2Q9BYX2 928 aa12.85□□□□□ -0.35
TUBE1-210ENST00000604967 AS3MTQ9HBK9 375 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms