RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 TFAP4Q01664 338 aa25.96■■□□□ 1.75
PPFIA3-211ENST00000602848 KIAA0825Q8IV33 1275 aa25.96■■□□□ 1.75
PPFIA3-211ENST00000602848 RBM28Q9NW13 759 aaKnown RBP25.96■■□□□ 1.75
PPFIA3-211ENST00000602848 VIL1P09327 827 aaKnown RBP25.95■■□□□ 1.74
PPFIA3-211ENST00000602848 DYNLL2Q96FJ2 89 aa25.95■■□□□ 1.74
PPFIA3-211ENST00000602848 MBD3O95983 291 aa25.94■■□□□ 1.74
PPFIA3-211ENST00000602848 CDK8P49336 464 aa25.94■■□□□ 1.74
PPFIA3-211ENST00000602848 EVX2Q03828 476 aa25.94■■□□□ 1.74
PPFIA3-211ENST00000602848 GSE1Q14687 1217 aa25.94■■□□□ 1.74
PPFIA3-211ENST00000602848 C8orf76Q96K31 380 aa25.94■■□□□ 1.74
PPFIA3-211ENST00000602848 IDI2Q9BXS1 227 aa25.94■■□□□ 1.74
PPFIA3-211ENST00000602848 ZNRF3Q9ULT6 936 aa25.94■■□□□ 1.74
PPFIA3-211ENST00000602848 DDX49Q9Y6V7 483 aaKnown RBP25.94■■□□□ 1.74
PPFIA3-211ENST00000602848 YBX3P16989 372 aaKnown RBP eCLIP25.93■■□□□ 1.74
PPFIA3-211ENST00000602848 NCLP19338 710 aaKnown RBP25.93■■□□□ 1.74
PPFIA3-211ENST00000602848 KRT85P78386 507 aa25.93■■□□□ 1.74
PPFIA3-211ENST00000602848 SSRP1Q08945 709 aaKnown RBP25.93■■□□□ 1.74
PPFIA3-211ENST00000602848 RESTQ13127 1097 aa25.93■■□□□ 1.74
PPFIA3-211ENST00000602848 FAM47AQ5JRC9 791 aa25.93■■□□□ 1.74
PPFIA3-211ENST00000602848 ATL3Q6DD88 541 aa25.93■■□□□ 1.74
PPFIA3-211ENST00000602848 RSBN1LQ6PCB5 846 aaPredicted RBP25.93■■□□□ 1.74
PPFIA3-211ENST00000602848 RAB11FIP4Q86YS3 637 aa25.93■■□□□ 1.74
PPFIA3-211ENST00000602848 NIM1KQ8IY84 436 aa25.93■■□□□ 1.74
PPFIA3-211ENST00000602848 MAP3K14Q99558 947 aa25.93■■□□□ 1.74
PPFIA3-211ENST00000602848 ZNF277Q9NRM2 450 aaPredicted RBP25.93■■□□□ 1.74
PPFIA3-211ENST00000602848 GOLGB1Q14789 3259 aaKnown RBP25.93■■□□□ 1.74
PPFIA3-211ENST00000602848 FMNL1O95466 1100 aaPredicted RBP25.92■■□□□ 1.74
PPFIA3-211ENST00000602848 TSPY3P0CV98 308 aa25.92■■□□□ 1.74
PPFIA3-211ENST00000602848 TSPY8P0CW00 308 aa25.92■■□□□ 1.74
PPFIA3-211ENST00000602848 RASA1P20936 1047 aa25.92■■□□□ 1.74
PPFIA3-211ENST00000602848 TRIM22Q8IYM9 498 aa25.92■■□□□ 1.74
PPFIA3-211ENST00000602848 FBXO18Q8NFZ0 1043 aa25.92■■□□□ 1.74
PPFIA3-211ENST00000602848 OSBPL5Q9H0X9 879 aaPredicted RBP25.92■■□□□ 1.74
PPFIA3-211ENST00000602848 SWAP70Q9UH65 585 aa25.92■■□□□ 1.74
PPFIA3-211ENST00000602848 RXRAP19793 462 aa25.92■■□□□ 1.74
PPFIA3-211ENST00000602848 MMP14P50281 582 aa25.92■■□□□ 1.74
PPFIA3-211ENST00000602848 NEDD1Q8NHV4 660 aa25.92■■□□□ 1.74
PPFIA3-211ENST00000602848 MYL10Q9BUA6 226 aa25.92■■□□□ 1.74
PPFIA3-211ENST00000602848 DHX36Q9H2U1 1008 aaKnown RBP25.92■■□□□ 1.74
PPFIA3-211ENST00000602848 ECM29Q5VYK3 1845 aa25.91■■□□□ 1.74
PPFIA3-211ENST00000602848 DNM1Q05193 864 aaKnown RBP25.91■■□□□ 1.74
PPFIA3-211ENST00000602848 TROAPQ12815 778 aa25.91■■□□□ 1.74
PPFIA3-211ENST00000602848 USP48Q86UV5 1035 aa25.91■■□□□ 1.74
PPFIA3-211ENST00000602848 SCAND2PQ9GZW5 306 aaPredicted RBP25.91■■□□□ 1.74
PPFIA3-211ENST00000602848 TAOK3Q9H2K8 898 aa25.91■■□□□ 1.74
PPFIA3-211ENST00000602848 HDAC9Q9UKV0 1011 aa25.91■■□□□ 1.74
PPFIA3-211ENST00000602848 CNPY2Q9Y2B0 182 aa25.91■■□□□ 1.74
PPFIA3-211ENST00000602848 HLA-DOAP06340 250 aa25.9■■□□□ 1.74
PPFIA3-211ENST00000602848 GABPAQ06546 454 aa25.9■■□□□ 1.74
PPFIA3-211ENST00000602848 PICALMQ13492 652 aa25.9■■□□□ 1.74
PPFIA3-211ENST00000602848 FERMT3Q86UX7 667 aa25.9■■□□□ 1.74
PPFIA3-211ENST00000602848 CCDC144CPQ8IYA2 1237 aa25.9■■□□□ 1.74
PPFIA3-211ENST00000602848 CRACR2BQ8N4Y2 399 aaPredicted RBP25.9■■□□□ 1.74
PPFIA3-211ENST00000602848 NUP133Q8WUM0 1156 aa25.9■■□□□ 1.74
PPFIA3-211ENST00000602848 GMLQ99445 158 aa25.9■■□□□ 1.74
PPFIA3-211ENST00000602848 EHD4Q9H223 541 aa25.9■■□□□ 1.74
PPFIA3-211ENST00000602848 DDX4Q9NQI0 724 aaKnown RBP25.9■■□□□ 1.74
PPFIA3-211ENST00000602848 LTBP3Q9NS15 1303 aa25.9■■□□□ 1.74
PPFIA3-211ENST00000602848 RBM5P52756 815 aaKnown RBP eCLIP25.89■■□□□ 1.74
PPFIA3-211ENST00000602848 RCSD1Q6JBY9 416 aa25.89■■□□□ 1.74
PPFIA3-211ENST00000602848 AGBL3Q8NEM8 1001 aa25.89■■□□□ 1.74
PPFIA3-211ENST00000602848 ALG1Q9BT22 464 aa25.89■■□□□ 1.74
PPFIA3-211ENST00000602848 KAT14Q9H8E8 782 aa25.89■■□□□ 1.74
PPFIA3-211ENST00000602848 CFAP45Q9UL16 551 aa25.89■■□□□ 1.74
PPFIA3-211ENST00000602848 BCS1LQ9Y276 419 aa25.89■■□□□ 1.74
PPFIA3-211ENST00000602848 CHAMP1Q96JM3 812 aa25.88■■□□□ 1.73
PPFIA3-211ENST00000602848 IL17RBQ9NRM6 502 aa25.88■■□□□ 1.73
PPFIA3-211ENST00000602848 FER1L6Q2WGJ9 1857 aa25.88■■□□□ 1.73
PPFIA3-211ENST00000602848 ELP1O95163 1332 aa25.88■■□□□ 1.73
PPFIA3-211ENST00000602848 DEXIO95424 95 aa25.88■■□□□ 1.73
PPFIA3-211ENST00000602848 SLC4A8Q2Y0W8 1093 aa25.88■■□□□ 1.73
PPFIA3-211ENST00000602848 FOXD4L6Q3SYB3 417 aaPredicted RBP25.88■■□□□ 1.73
PPFIA3-211ENST00000602848 FOXD4L3Q6VB84 417 aaPredicted RBP25.88■■□□□ 1.73
PPFIA3-211ENST00000602848 NBPF11Q86T75 865 aa25.88■■□□□ 1.73
PPFIA3-211ENST00000602848 CTCFLQ8NI51 663 aaPredicted RBP25.88■■□□□ 1.73
PPFIA3-211ENST00000602848 RNF26Q9BY78 433 aaPredicted RBP25.88■■□□□ 1.73
PPFIA3-211ENST00000602848 SERPINB13Q9UIV8 391 aa25.88■■□□□ 1.73
PPFIA3-211ENST00000602848 KIF5BP33176 963 aa25.87■■□□□ 1.73
PPFIA3-211ENST00000602848 TRIM29Q14134 588 aa25.87■■□□□ 1.73
PPFIA3-211ENST00000602848 CFAP100Q494V2 611 aa25.87■■□□□ 1.73
PPFIA3-211ENST00000602848 SLC26A6Q9BXS9 759 aa25.87■■□□□ 1.73
PPFIA3-211ENST00000602848 PLIN4Q96Q06 1357 aa25.86■■□□□ 1.73
PPFIA3-211ENST00000602848 PSMD14O00487 310 aa25.86■■□□□ 1.73
PPFIA3-211ENST00000602848 NMT2O60551 498 aa25.86■■□□□ 1.73
PPFIA3-211ENST00000602848 ENTPD3O75355 529 aa25.86■■□□□ 1.73
PPFIA3-211ENST00000602848 NOVP48745 357 aa25.86■■□□□ 1.73
PPFIA3-211ENST00000602848 BRAPQ7Z569 592 aa25.86■■□□□ 1.73
PPFIA3-211ENST00000602848 OGFOD1Q8N543 542 aa25.86■■□□□ 1.73
PPFIA3-211ENST00000602848 SLC44A5Q8NCS7 719 aa25.86■■□□□ 1.73
PPFIA3-211ENST00000602848 JDP2Q8WYK2 163 aa25.86■■□□□ 1.73
PPFIA3-211ENST00000602848 PHKBQ93100 1093 aa25.86■■□□□ 1.73
PPFIA3-211ENST00000602848 ZNF396Q96N95 335 aaPredicted RBP25.86■■□□□ 1.73
PPFIA3-211ENST00000602848 COL2A1P02458 1487 aaPredicted RBP25.85■■□□□ 1.73
PPFIA3-211ENST00000602848 UBE2HP62256 183 aa25.85■■□□□ 1.73
PPFIA3-211ENST00000602848 PPP4R3BQ5MIZ7 849 aa25.85■■□□□ 1.73
PPFIA3-211ENST00000602848 ADAMTSL1Q8N6G6 1762 aa25.85■■□□□ 1.73
PPFIA3-211ENST00000602848 TCHHQ07283 1943 aa25.85■■□□□ 1.73
PPFIA3-211ENST00000602848 PRPF3O43395 683 aaKnown RBP25.85■■□□□ 1.73
PPFIA3-211ENST00000602848 RAD17O75943 681 aa25.85■■□□□ 1.73
PPFIA3-211ENST00000602848 GNAQP50148 359 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms