RNA–Protein interactions for RNA: ENST00000602841.5

SCNM1-207, Transcript of sodium channel modifier 1, humanhuman

TSL 3

Gene SCNM1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-207ENST00000602841 ZNF408Q9H9D4 720 aa12.75□□□□□ -0.37
SCNM1-207ENST00000602841 MYOZ2Q9NPC6 264 aa12.75□□□□□ -0.37
SCNM1-207ENST00000602841 SAP30BPQ9UHR5 308 aaKnown RBP12.75□□□□□ -0.37
SCNM1-207ENST00000602841 CNOT7Q9UIV1 285 aaKnown RBP12.75□□□□□ -0.37
SCNM1-207ENST00000602841 TPCN1Q9ULQ1 816 aa12.75□□□□□ -0.37
SCNM1-207ENST00000602841 COLQQ9Y215 455 aaPredicted RBP12.75□□□□□ -0.37
SCNM1-207ENST00000602841 ATRNL1Q5VV63 1379 aa12.74□□□□□ -0.37
SCNM1-207ENST00000602841 B4E1Z4 1266 aa12.74□□□□□ -0.37
SCNM1-207ENST00000602841 K7ELQ4 463 aaPredicted RBP12.74□□□□□ -0.37
SCNM1-207ENST00000602841 USP5P45974 858 aa12.74□□□□□ -0.37
SCNM1-207ENST00000602841 NOVP48745 357 aa12.74□□□□□ -0.37
SCNM1-207ENST00000602841 KIF23Q02241 960 aaPredicted RBP12.74□□□□□ -0.37
SCNM1-207ENST00000602841 SEC23AQ15436 765 aa12.74□□□□□ -0.37
SCNM1-207ENST00000602841 ME3Q16798 604 aa12.74□□□□□ -0.37
SCNM1-207ENST00000602841 C16orf86Q6ZW13 317 aa12.74□□□□□ -0.37
SCNM1-207ENST00000602841 SLC44A5Q8NCS7 719 aa12.74□□□□□ -0.37
SCNM1-207ENST00000602841 NCOA7Q8NI08 942 aa12.74□□□□□ -0.37
SCNM1-207ENST00000602841 DDRGK1Q96HY6 314 aa12.74□□□□□ -0.37
SCNM1-207ENST00000602841 TMX3Q96JJ7 454 aa12.74□□□□□ -0.37
SCNM1-207ENST00000602841 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.74□□□□□ -0.37
SCNM1-207ENST00000602841 GPRC5DQ9NZD1 345 aa12.74□□□□□ -0.37
SCNM1-207ENST00000602841 BRPF3Q9ULD4 1205 aa12.74□□□□□ -0.37
SCNM1-207ENST00000602841 COL6A3P12111 3177 aa12.74□□□□□ -0.37
SCNM1-207ENST00000602841 BAZ2AQ9UIF9 1905 aaKnown RBP12.74□□□□□ -0.37
SCNM1-207ENST00000602841 SIPA1L1O43166 1804 aa12.74□□□□□ -0.37
SCNM1-207ENST00000602841 SH2B2O14492 632 aaPredicted RBP12.73□□□□□ -0.37
SCNM1-207ENST00000602841 PRC1O43663 620 aa12.73□□□□□ -0.37
SCNM1-207ENST00000602841 ENTPD3O75355 529 aa12.73□□□□□ -0.37
SCNM1-207ENST00000602841 PRDM1O75626 825 aa12.73□□□□□ -0.37
SCNM1-207ENST00000602841 HMGB1P09429 215 aaKnown RBP12.73□□□□□ -0.37
SCNM1-207ENST00000602841 RASA1P20936 1047 aa12.73□□□□□ -0.37
SCNM1-207ENST00000602841 DLGAP5Q15398 846 aa12.73□□□□□ -0.37
SCNM1-207ENST00000602841 PKN2Q16513 984 aaKnown RBP12.73□□□□□ -0.37
SCNM1-207ENST00000602841 FKBP1CQ5VVH2 108 aa12.73□□□□□ -0.37
SCNM1-207ENST00000602841 Q6ZUG5 572 aa12.73□□□□□ -0.37
SCNM1-207ENST00000602841 SAMD7Q7Z3H4 446 aa12.73□□□□□ -0.37
SCNM1-207ENST00000602841 CDAN1Q8IWY9 1227 aa12.73□□□□□ -0.37
SCNM1-207ENST00000602841 MICALL2Q8IY33 904 aa12.73□□□□□ -0.37
SCNM1-207ENST00000602841 NOL10Q9BSC4 688 aaKnown RBP12.73□□□□□ -0.37
SCNM1-207ENST00000602841 COL2A1P02458 1487 aaPredicted RBP12.72□□□□□ -0.37
SCNM1-207ENST00000602841 KDM4AO75164 1064 aa12.72□□□□□ -0.37
SCNM1-207ENST00000602841 CDK8P49336 464 aa12.72□□□□□ -0.37
SCNM1-207ENST00000602841 HUNKP57058 714 aa12.72□□□□□ -0.37
SCNM1-207ENST00000602841 MAP3K10Q02779 954 aa12.72□□□□□ -0.37
SCNM1-207ENST00000602841 PICALMQ13492 652 aa12.72□□□□□ -0.37
SCNM1-207ENST00000602841 RRP1BQ14684 758 aaKnown RBP12.72□□□□□ -0.37
SCNM1-207ENST00000602841 SLC4A8Q2Y0W8 1093 aa12.72□□□□□ -0.37
SCNM1-207ENST00000602841 RCSD1Q6JBY9 416 aa12.72□□□□□ -0.37
SCNM1-207ENST00000602841 MFSD6Q6ZSS7 791 aa12.72□□□□□ -0.37
SCNM1-207ENST00000602841 STK11IPQ8N1F8 1099 aa12.72□□□□□ -0.37
SCNM1-207ENST00000602841 TRPM4Q8TD43 1214 aa12.72□□□□□ -0.37
SCNM1-207ENST00000602841 CNKSR2Q8WXI2 1034 aa12.72□□□□□ -0.37
SCNM1-207ENST00000602841 TEPSINQ96N21 525 aa12.72□□□□□ -0.37
SCNM1-207ENST00000602841 IL17RBQ9NRM6 502 aa12.72□□□□□ -0.37
SCNM1-207ENST00000602841 HDAC9Q9UKV0 1011 aa12.72□□□□□ -0.37
SCNM1-207ENST00000602841 CUL9Q8IWT3 2517 aa12.72□□□□□ -0.37
SCNM1-207ENST00000602841 ECM29Q5VYK3 1845 aa12.72□□□□□ -0.37
SCNM1-207ENST00000602841 IGKV6D-41A0A0C4DH26 115 aa12.71□□□□□ -0.37
SCNM1-207ENST00000602841 CLRN2A0PK11 232 aa12.71□□□□□ -0.37
SCNM1-207ENST00000602841 ST18O60284 1047 aa12.71□□□□□ -0.37
SCNM1-207ENST00000602841 PCP11498 1178 aaKnown RBP12.71□□□□□ -0.37
SCNM1-207ENST00000602841 MCM5P33992 734 aa12.71□□□□□ -0.37
SCNM1-207ENST00000602841 SHMT1P34896 483 aa12.71□□□□□ -0.37
SCNM1-207ENST00000602841 MCM2P49736 904 aa12.71□□□□□ -0.37
SCNM1-207ENST00000602841 RBM5P52756 815 aaKnown RBP eCLIP12.71□□□□□ -0.37
SCNM1-207ENST00000602841 JAG1P78504 1218 aa12.71□□□□□ -0.37
SCNM1-207ENST00000602841 OGFOD1Q8N543 542 aa12.71□□□□□ -0.37
SCNM1-207ENST00000602841 FAM151AQ8WW52 585 aa12.71□□□□□ -0.37
SCNM1-207ENST00000602841 BRF1Q92994 677 aa12.71□□□□□ -0.37
SCNM1-207ENST00000602841 CSRNP1Q96S65 589 aa12.71□□□□□ -0.37
SCNM1-207ENST00000602841 MTA3Q9BTC8 594 aa12.71□□□□□ -0.37
SCNM1-207ENST00000602841 EHD4Q9H223 541 aa12.71□□□□□ -0.37
SCNM1-207ENST00000602841 LY9Q9HBG7 655 aa12.71□□□□□ -0.37
SCNM1-207ENST00000602841 ADARB2Q9NS39 739 aaKnown RBP12.71□□□□□ -0.37
SCNM1-207ENST00000602841 LIMCH1Q9UPQ0 1083 aa12.71□□□□□ -0.37
SCNM1-207ENST00000602841 LAMB1P07942 1786 aa12.71□□□□□ -0.38
SCNM1-207ENST00000602841 NAV1Q8NEY1 1877 aa12.7□□□□□ -0.38
SCNM1-207ENST00000602841 NMT2O60551 498 aa12.7□□□□□ -0.38
SCNM1-207ENST00000602841 POLR3DP05423 398 aaPredicted RBP12.7□□□□□ -0.38
SCNM1-207ENST00000602841 LIFRP42702 1097 aa12.7□□□□□ -0.38
SCNM1-207ENST00000602841 APOBRQ0VD83 1088 aa12.7□□□□□ -0.38
SCNM1-207ENST00000602841 TBC1D10BQ4KMP7 808 aaPredicted RBP12.7□□□□□ -0.38
SCNM1-207ENST00000602841 RGMBQ6NW40 437 aa12.7□□□□□ -0.38
SCNM1-207ENST00000602841 TATDN1Q6P1N9 297 aa12.7□□□□□ -0.38
SCNM1-207ENST00000602841 DLK2Q6UY11 383 aa12.7□□□□□ -0.38
SCNM1-207ENST00000602841 FAM83AQ86UY5 434 aa12.7□□□□□ -0.38
SCNM1-207ENST00000602841 SGMS1Q86VZ5 419 aa12.7□□□□□ -0.38
SCNM1-207ENST00000602841 ANKS1AQ92625 1134 aa12.7□□□□□ -0.38
SCNM1-207ENST00000602841 KRT23Q9C075 422 aa12.7□□□□□ -0.38
SCNM1-207ENST00000602841 RNF41Q9H4P4 317 aaPredicted RBP12.7□□□□□ -0.38
SCNM1-207ENST00000602841 CNNM2Q9H8M5 875 aa12.7□□□□□ -0.38
SCNM1-207ENST00000602841 FAM217BQ9NTX9 383 aaPredicted RBP12.7□□□□□ -0.38
SCNM1-207ENST00000602841 TCP10L2B9ZVM9 353 aa12.69□□□□□ -0.38
SCNM1-207ENST00000602841 DTNBO60941 627 aa12.69□□□□□ -0.38
SCNM1-207ENST00000602841 CTDNEP1O95476 244 aa12.69□□□□□ -0.38
SCNM1-207ENST00000602841 PDIA3P30101 505 aaKnown RBP12.69□□□□□ -0.38
SCNM1-207ENST00000602841 TCP10Q12799 353 aa12.69□□□□□ -0.38
SCNM1-207ENST00000602841 SHROOM1Q2M3G4 852 aaPredicted RBP12.69□□□□□ -0.38
SCNM1-207ENST00000602841 KIF4BQ2VIQ3 1234 aa12.69□□□□□ -0.38
SCNM1-207ENST00000602841 FAM47AQ5JRC9 791 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms