RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 PKP1Q13835 747 aa20.36■□□□□ 0.85
PPFIA3-207ENST00000602716 SEC23AQ15436 765 aa20.36■□□□□ 0.85
PPFIA3-207ENST00000602716 TBC1D10BQ4KMP7 808 aaPredicted RBP20.36■□□□□ 0.85
PPFIA3-207ENST00000602716 GRPEL1Q9HAV7 217 aa20.36■□□□□ 0.85
PPFIA3-207ENST00000602716 VEZTQ9HBM0 779 aa20.36■□□□□ 0.85
PPFIA3-207ENST00000602716 CNOT7Q9UIV1 285 aaKnown RBP20.36■□□□□ 0.85
PPFIA3-207ENST00000602716 GOLGA8BA8MQT2 603 aa20.35■□□□□ 0.85
PPFIA3-207ENST00000602716 PPFIA3O75145 1194 aa20.35■□□□□ 0.85
PPFIA3-207ENST00000602716 PCP11498 1178 aaKnown RBP20.35■□□□□ 0.85
PPFIA3-207ENST00000602716 GPR162Q16538 588 aa20.35■□□□□ 0.85
PPFIA3-207ENST00000602716 ENAHQ8N8S7 591 aaPredicted RBP20.35■□□□□ 0.85
PPFIA3-207ENST00000602716 PFKFB2O60825 505 aa20.34■□□□□ 0.85
PPFIA3-207ENST00000602716 DPF2Q92785 391 aa20.34■□□□□ 0.85
PPFIA3-207ENST00000602716 INTS4Q96HW7 963 aaKnown RBP20.34■□□□□ 0.85
PPFIA3-207ENST00000602716 TSPY2A6NKD2 308 aa20.34■□□□□ 0.85
PPFIA3-207ENST00000602716 TFAP4Q01664 338 aa20.34■□□□□ 0.85
PPFIA3-207ENST00000602716 APOA5Q6Q788 366 aa20.34■□□□□ 0.85
PPFIA3-207ENST00000602716 ZSCAN10Q96SZ4 725 aaPredicted RBP20.34■□□□□ 0.85
PPFIA3-207ENST00000602716 UBAC1Q9BSL1 405 aa20.34■□□□□ 0.85
PPFIA3-207ENST00000602716 MKNK2Q9HBH9 465 aa20.34■□□□□ 0.85
PPFIA3-207ENST00000602716 RRAGDQ9NQL2 400 aaPredicted RBP20.34■□□□□ 0.85
PPFIA3-207ENST00000602716 JAK2O60674 1132 aa20.33■□□□□ 0.85
PPFIA3-207ENST00000602716 DDNO94850 711 aaPredicted RBP20.33■□□□□ 0.85
PPFIA3-207ENST00000602716 SHROOM1Q2M3G4 852 aaPredicted RBP20.33■□□□□ 0.85
PPFIA3-207ENST00000602716 TTC6Q86TZ1 520 aa20.33■□□□□ 0.85
PPFIA3-207ENST00000602716 TRPM4Q8TD43 1214 aa20.33■□□□□ 0.85
PPFIA3-207ENST00000602716 IL17RBQ9NRM6 502 aa20.33■□□□□ 0.85
PPFIA3-207ENST00000602716 ATRNL1Q5VV63 1379 aa20.33■□□□□ 0.84
PPFIA3-207ENST00000602716 NPM3O75607 178 aaKnown RBP20.32■□□□□ 0.84
PPFIA3-207ENST00000602716 SHMT1P34896 483 aa20.32■□□□□ 0.84
PPFIA3-207ENST00000602716 WTAPQ15007 396 aa20.32■□□□□ 0.84
PPFIA3-207ENST00000602716 SGMS1Q86VZ5 419 aa20.32■□□□□ 0.84
PPFIA3-207ENST00000602716 MICU3Q86XE3 530 aa20.32■□□□□ 0.84
PPFIA3-207ENST00000602716 ZSCAN29Q8IWY8 852 aaPredicted RBP20.32■□□□□ 0.84
PPFIA3-207ENST00000602716 GPC2Q8N158 579 aa20.32■□□□□ 0.84
PPFIA3-207ENST00000602716 ZNF274Q96GC6 653 aaPredicted RBP20.32■□□□□ 0.84
PPFIA3-207ENST00000602716 SERPINB13Q9UIV8 391 aa20.32■□□□□ 0.84
PPFIA3-207ENST00000602716 ENTPD3O75355 529 aa20.32■□□□□ 0.84
PPFIA3-207ENST00000602716 CTDNEP1O95476 244 aa20.32■□□□□ 0.84
PPFIA3-207ENST00000602716 LIFRP42702 1097 aa20.32■□□□□ 0.84
PPFIA3-207ENST00000602716 NFXL1Q6ZNB6 911 aa20.32■□□□□ 0.84
PPFIA3-207ENST00000602716 CCDC144CPQ8IYA2 1237 aa20.32■□□□□ 0.84
PPFIA3-207ENST00000602716 TMOD2Q9NZR1 351 aa20.32■□□□□ 0.84
PPFIA3-207ENST00000602716 BAG4O95429 457 aaKnown RBP20.31■□□□□ 0.84
PPFIA3-207ENST00000602716 EPS15P42566 896 aa20.31■□□□□ 0.84
PPFIA3-207ENST00000602716 KIF4BQ2VIQ3 1234 aa20.31■□□□□ 0.84
PPFIA3-207ENST00000602716 RCSD1Q6JBY9 416 aa20.31■□□□□ 0.84
PPFIA3-207ENST00000602716 CLEC10AQ8IUN9 316 aa20.31■□□□□ 0.84
PPFIA3-207ENST00000602716 TMEM39BQ9GZU3 492 aa20.31■□□□□ 0.84
PPFIA3-207ENST00000602716 GPRC5DQ9NZD1 345 aa20.31■□□□□ 0.84
PPFIA3-207ENST00000602716 GOLGA6L22H0YM25 854 aa20.31■□□□□ 0.84
PPFIA3-207ENST00000602716 HLA-DOAP06340 250 aa20.31■□□□□ 0.84
PPFIA3-207ENST00000602716 AKR1B1P15121 316 aa20.31■□□□□ 0.84
PPFIA3-207ENST00000602716 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.31■□□□□ 0.84
PPFIA3-207ENST00000602716 COL2A1P02458 1487 aaPredicted RBP20.3■□□□□ 0.84
PPFIA3-207ENST00000602716 NUCB2P80303 420 aa20.3■□□□□ 0.84
PPFIA3-207ENST00000602716 SART3Q15020 963 aaKnown RBP20.3■□□□□ 0.84
PPFIA3-207ENST00000602716 EHD4Q9H223 541 aa20.3■□□□□ 0.84
PPFIA3-207ENST00000602716 TSPY3P0CV98 308 aa20.29■□□□□ 0.84
PPFIA3-207ENST00000602716 TSPY8P0CW00 308 aa20.29■□□□□ 0.84
PPFIA3-207ENST00000602716 GJB2P29033 226 aa20.29■□□□□ 0.84
PPFIA3-207ENST00000602716 CDC27P30260 824 aa20.29■□□□□ 0.84
PPFIA3-207ENST00000602716 IQCA1Q86XH1 822 aa20.29■□□□□ 0.84
PPFIA3-207ENST00000602716 GAS2L3Q86XJ1 694 aa20.29■□□□□ 0.84
PPFIA3-207ENST00000602716 NSUN7Q8NE18 718 aaKnown RBP20.29■□□□□ 0.84
PPFIA3-207ENST00000602716 CSRNP1Q96S65 589 aa20.29■□□□□ 0.84
PPFIA3-207ENST00000602716 ERICH2A1L162 156 aa20.29■□□□□ 0.84
PPFIA3-207ENST00000602716 CCDC69A6NI79 296 aa20.29■□□□□ 0.84
PPFIA3-207ENST00000602716 ZNF444Q8N0Y2 327 aaPredicted RBP20.29■□□□□ 0.84
PPFIA3-207ENST00000602716 MTA3Q9BTC8 594 aa20.29■□□□□ 0.84
PPFIA3-207ENST00000602716 DHX36Q9H2U1 1008 aaKnown RBP20.29■□□□□ 0.84
PPFIA3-207ENST00000602716 CWC22Q9HCG8 908 aaKnown RBP20.29■□□□□ 0.84
PPFIA3-207ENST00000602716 FAM217BQ9NTX9 383 aaPredicted RBP20.29■□□□□ 0.84
PPFIA3-207ENST00000602716 SMC3Q9UQE7 1217 aa20.29■□□□□ 0.84
PPFIA3-207ENST00000602716 IFIT1BQ5T764 474 aaKnown RBP20.28■□□□□ 0.84
PPFIA3-207ENST00000602716 ZNF654Q8IZM8 581 aa20.28■□□□□ 0.84
PPFIA3-207ENST00000602716 FAM151AQ8WW52 585 aa20.28■□□□□ 0.84
PPFIA3-207ENST00000602716 PGAP2Q9UHJ9 254 aa20.28■□□□□ 0.84
PPFIA3-207ENST00000602716 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.28■□□□□ 0.84
PPFIA3-207ENST00000602716 SLC12A7Q9Y666 1083 aa20.28■□□□□ 0.84
PPFIA3-207ENST00000602716 GOLGA8AA7E2F4 631 aa20.27■□□□□ 0.84
PPFIA3-207ENST00000602716 ZBTB43O43298 467 aa20.27■□□□□ 0.84
PPFIA3-207ENST00000602716 MYO1BO43795 1136 aa20.27■□□□□ 0.84
PPFIA3-207ENST00000602716 METAP2P50579 478 aaKnown RBP eCLIP20.27■□□□□ 0.84
PPFIA3-207ENST00000602716 HIRAP54198 1017 aaPredicted RBP20.27■□□□□ 0.84
PPFIA3-207ENST00000602716 RRP1BQ14684 758 aaKnown RBP20.27■□□□□ 0.84
PPFIA3-207ENST00000602716 RASGRP2Q7LDG7 609 aa20.27■□□□□ 0.84
PPFIA3-207ENST00000602716 CRACR2BQ8N4Y2 399 aaPredicted RBP20.27■□□□□ 0.84
PPFIA3-207ENST00000602716 DDX11Q96FC9 970 aa20.27■□□□□ 0.84
PPFIA3-207ENST00000602716 PI4KBQ9UBF8 816 aa20.27■□□□□ 0.84
PPFIA3-207ENST00000602716 HACL1Q9UJ83 578 aa20.27■□□□□ 0.84
PPFIA3-207ENST00000602716 ZDHHC9Q9Y397 364 aa20.27■□□□□ 0.84
PPFIA3-207ENST00000602716 PLIN4Q96Q06 1357 aa20.27■□□□□ 0.84
PPFIA3-207ENST00000602716 PTPDC1A2A3K4 754 aa20.27■□□□□ 0.84
PPFIA3-207ENST00000602716 ADD1P35611 737 aaKnown RBP20.27■□□□□ 0.84
PPFIA3-207ENST00000602716 KLHL40Q2TBA0 621 aa20.27■□□□□ 0.84
PPFIA3-207ENST00000602716 NEDD1Q8NHV4 660 aa20.27■□□□□ 0.84
PPFIA3-207ENST00000602716 JAG1P78504 1218 aa20.26■□□□□ 0.83
PPFIA3-207ENST00000602716 FKBP1CQ5VVH2 108 aa20.26■□□□□ 0.83
PPFIA3-207ENST00000602716 CEP95Q96GE4 821 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms