RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 ZHX2Q9Y6X8 837 aa10.61□□□□□ -0.71
SSBP4-208ENST00000600628 SMIM22K7EJ46 135 aa10.6□□□□□ -0.71
SSBP4-208ENST00000600628 TLR2O60603 784 aa10.6□□□□□ -0.71
SSBP4-208ENST00000600628 FKTNO75072 461 aa10.6□□□□□ -0.71
SSBP4-208ENST00000600628 ASNSP08243 561 aa10.6□□□□□ -0.71
SSBP4-208ENST00000600628 SBK1Q52WX2 424 aa10.6□□□□□ -0.71
SSBP4-208ENST00000600628 CTU1Q7Z7A3 348 aaKnown RBP10.6□□□□□ -0.71
SSBP4-208ENST00000600628 TTC6Q86TZ1 520 aa10.6□□□□□ -0.71
SSBP4-208ENST00000600628 LNPKQ9C0E8 428 aa10.6□□□□□ -0.71
SSBP4-208ENST00000600628 PICK1Q9NRD5 415 aa10.6□□□□□ -0.71
SSBP4-208ENST00000600628 SAP30BPQ9UHR5 308 aaKnown RBP10.6□□□□□ -0.71
SSBP4-208ENST00000600628 ROBO3Q96MS0 1386 aa10.6□□□□□ -0.71
SSBP4-208ENST00000600628 ZSWIM8A7E2V4 1837 aa10.6□□□□□ -0.71
SSBP4-208ENST00000600628 RLFQ13129 1914 aa10.6□□□□□ -0.71
SSBP4-208ENST00000600628 MGAMO43451 1857 aa10.59□□□□□ -0.71
SSBP4-208ENST00000600628 DOCK3Q8IZD9 2030 aa10.59□□□□□ -0.71
SSBP4-208ENST00000600628 USP17L5A8MUK1 530 aa10.59□□□□□ -0.71
SSBP4-208ENST00000600628 HLA-DOAP06340 250 aa10.59□□□□□ -0.71
SSBP4-208ENST00000600628 GUCY1A2P33402 732 aa10.59□□□□□ -0.71
SSBP4-208ENST00000600628 USP5P45974 858 aa10.59□□□□□ -0.71
SSBP4-208ENST00000600628 PKN2Q16513 984 aaKnown RBP10.59□□□□□ -0.71
SSBP4-208ENST00000600628 CTR9Q6PD62 1173 aa10.59□□□□□ -0.71
SSBP4-208ENST00000600628 C17orf99Q6UX52 265 aa10.59□□□□□ -0.71
SSBP4-208ENST00000600628 PROCA1Q8NCQ7 364 aaPredicted RBP10.59□□□□□ -0.71
SSBP4-208ENST00000600628 ZNF280CQ8ND82 737 aa10.59□□□□□ -0.71
SSBP4-208ENST00000600628 SEC62Q99442 399 aaKnown RBP10.59□□□□□ -0.71
SSBP4-208ENST00000600628 EPB41L4AQ9HCS5 686 aaPredicted RBP10.59□□□□□ -0.71
SSBP4-208ENST00000600628 ZBTB21Q9ULJ3 1066 aa10.59□□□□□ -0.71
SSBP4-208ENST00000600628 PARP14Q460N5 1801 aa10.58□□□□□ -0.72
SSBP4-208ENST00000600628 CCDC85CA6NKD9 419 aa10.58□□□□□ -0.72
SSBP4-208ENST00000600628 M0R2C6 588 aa10.58□□□□□ -0.72
SSBP4-208ENST00000600628 GPAA1O43292 621 aa10.58□□□□□ -0.72
SSBP4-208ENST00000600628 BCRP11274 1271 aa10.58□□□□□ -0.72
SSBP4-208ENST00000600628 PDE4AP27815 886 aa10.58□□□□□ -0.72
SSBP4-208ENST00000600628 C16orf86Q6ZW13 317 aa10.58□□□□□ -0.72
SSBP4-208ENST00000600628 FASTKD5Q7L8L6 764 aaKnown RBP10.58□□□□□ -0.72
SSBP4-208ENST00000600628 CCDC84Q86UT8 332 aaPredicted RBP10.58□□□□□ -0.72
SSBP4-208ENST00000600628 EVI5LQ96CN4 794 aa10.58□□□□□ -0.72
SSBP4-208ENST00000600628 BCL11AQ9H165 835 aa10.58□□□□□ -0.72
SSBP4-208ENST00000600628 ZFYVE28Q9HCC9 887 aa10.58□□□□□ -0.72
SSBP4-208ENST00000600628 MCM9Q9NXL9 1143 aa10.58□□□□□ -0.72
SSBP4-208ENST00000600628 USP17L12C9JPN9 530 aa10.57□□□□□ -0.72
SSBP4-208ENST00000600628 USP17L21D6R901 530 aa10.57□□□□□ -0.72
SSBP4-208ENST00000600628 PDHXO00330 501 aa10.57□□□□□ -0.72
SSBP4-208ENST00000600628 CYP2D6P10635 497 aa10.57□□□□□ -0.72
SSBP4-208ENST00000600628 HOXA7P31268 230 aaPredicted RBP10.57□□□□□ -0.72
SSBP4-208ENST00000600628 BACE1P56817 501 aa10.57□□□□□ -0.72
SSBP4-208ENST00000600628 IRX6P78412 446 aaPredicted RBP10.57□□□□□ -0.72
SSBP4-208ENST00000600628 SPP2Q13103 211 aa10.57□□□□□ -0.72
SSBP4-208ENST00000600628 TAF1CQ15572 869 aaPredicted RBP10.57□□□□□ -0.72
SSBP4-208ENST00000600628 SIAH1Q8IUQ4 282 aa10.57□□□□□ -0.72
SSBP4-208ENST00000600628 C12orf42Q96LP6 360 aa10.57□□□□□ -0.72
SSBP4-208ENST00000600628 SWAP70Q9UH65 585 aa10.57□□□□□ -0.72
SSBP4-208ENST00000600628 AGTPBP1Q9UPW5 1226 aa10.57□□□□□ -0.72
SSBP4-208ENST00000600628 SLC4A4Q9Y6R1 1079 aa10.57□□□□□ -0.72
SSBP4-208ENST00000600628 CYP2D7A0A087X1C5 515 aa10.56□□□□□ -0.72
SSBP4-208ENST00000600628 TRIM75PA6NK02 468 aa10.56□□□□□ -0.72
SSBP4-208ENST00000600628 C19orf81C9J6K1 198 aa10.56□□□□□ -0.72
SSBP4-208ENST00000600628 PATL2C9JE40 543 aaKnown RBP10.56□□□□□ -0.72
SSBP4-208ENST00000600628 GH2P01242 217 aa10.56□□□□□ -0.72
SSBP4-208ENST00000600628 POLR3DP05423 398 aaPredicted RBP10.56□□□□□ -0.72
SSBP4-208ENST00000600628 GNAT2P19087 354 aa10.56□□□□□ -0.72
SSBP4-208ENST00000600628 SP3Q02447 781 aa10.56□□□□□ -0.72
SSBP4-208ENST00000600628 ALX1Q15699 326 aa10.56□□□□□ -0.72
SSBP4-208ENST00000600628 LRRFIP1Q32MZ4 808 aaKnown RBP10.56□□□□□ -0.72
SSBP4-208ENST00000600628 CERKLQ49MI3 558 aaPredicted RBP10.56□□□□□ -0.72
SSBP4-208ENST00000600628 TREML2Q5T2D2 321 aa10.56□□□□□ -0.72
SSBP4-208ENST00000600628 B4GALNT3Q6L9W6 998 aa10.56□□□□□ -0.72
SSBP4-208ENST00000600628 POTEEQ6S8J3 1075 aa10.56□□□□□ -0.72
SSBP4-208ENST00000600628 OTOP1Q7RTM1 612 aa10.56□□□□□ -0.72
SSBP4-208ENST00000600628 CRACR2BQ8N4Y2 399 aaPredicted RBP10.56□□□□□ -0.72
SSBP4-208ENST00000600628 SLC44A5Q8NCS7 719 aa10.56□□□□□ -0.72
SSBP4-208ENST00000600628 ERO1AQ96HE7 468 aa10.56□□□□□ -0.72
SSBP4-208ENST00000600628 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.56□□□□□ -0.72
SSBP4-208ENST00000600628 EMILIN3Q9NT22 766 aa10.56□□□□□ -0.72
SSBP4-208ENST00000600628 RBBP6Q7Z6E9 1792 aaKnown RBP10.55□□□□□ -0.72
SSBP4-208ENST00000600628 GDF11O95390 407 aa10.55□□□□□ -0.72
SSBP4-208ENST00000600628 FGRP09769 529 aa10.55□□□□□ -0.72
SSBP4-208ENST00000600628 CTGFP29279 349 aa10.55□□□□□ -0.72
SSBP4-208ENST00000600628 CDK8P49336 464 aa10.55□□□□□ -0.72
SSBP4-208ENST00000600628 SLC4A8Q2Y0W8 1093 aa10.55□□□□□ -0.72
SSBP4-208ENST00000600628 DYNLL2Q96FJ2 89 aa10.55□□□□□ -0.72
SSBP4-208ENST00000600628 CCDC17Q96LX7 622 aa10.55□□□□□ -0.72
SSBP4-208ENST00000600628 FSD1Q9BTV5 496 aa10.55□□□□□ -0.72
SSBP4-208ENST00000600628 KIAA1683Q9H0B3 1180 aa10.55□□□□□ -0.72
SSBP4-208ENST00000600628 HELLSQ9NRZ9 838 aa10.55□□□□□ -0.72
SSBP4-208ENST00000600628 ARPP21Q9UBL0 812 aaPredicted RBP10.55□□□□□ -0.72
SSBP4-208ENST00000600628 A0A0G2JMZ2 1700 aa10.55□□□□□ -0.72
SSBP4-208ENST00000600628 ZMYM6O95789 1325 aa10.55□□□□□ -0.72
SSBP4-208ENST00000600628 PLIN4Q96Q06 1357 aa10.54□□□□□ -0.72
SSBP4-208ENST00000600628 PLXNB2O15031 1838 aa10.54□□□□□ -0.72
SSBP4-208ENST00000600628 LAMA4Q16363 1823 aa10.54□□□□□ -0.72
SSBP4-208ENST00000600628 IGKV6D-41A0A0C4DH26 115 aa10.54□□□□□ -0.72
SSBP4-208ENST00000600628 A0A0D9SFI3 127 aa10.54□□□□□ -0.72
SSBP4-208ENST00000600628 A0A1W2PRG0 241 aa10.54□□□□□ -0.72
SSBP4-208ENST00000600628 USP17L10C9JJH3 530 aa10.54□□□□□ -0.72
SSBP4-208ENST00000600628 RASA1P20936 1047 aa10.54□□□□□ -0.72
SSBP4-208ENST00000600628 HMGCS2P54868 508 aa10.54□□□□□ -0.72
SSBP4-208ENST00000600628 LACTBP83111 547 aaPredicted RBP10.54□□□□□ -0.72
SSBP4-208ENST00000600628 MTMR2Q13614 643 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms