RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 TRIM22Q8IYM9 498 aa17.65■□□□□ 0.42
HIF3A-218ENST00000600383 MTFR1LQ9H019 292 aa17.65■□□□□ 0.42
HIF3A-218ENST00000600383 ZNF287Q9HBT7 754 aa17.65■□□□□ 0.42
HIF3A-218ENST00000600383 IL17RBQ9NRM6 502 aa17.65■□□□□ 0.42
HIF3A-218ENST00000600383 PIM2Q9P1W9 311 aa17.65■□□□□ 0.42
HIF3A-218ENST00000600383 YDJCA8MPS7 323 aa17.64■□□□□ 0.41
HIF3A-218ENST00000600383 WDHD1O75717 1129 aaPredicted RBP17.64■□□□□ 0.41
HIF3A-218ENST00000600383 UBE2HP62256 183 aa17.64■□□□□ 0.41
HIF3A-218ENST00000600383 LARGE2Q8N3Y3 721 aa17.64■□□□□ 0.41
HIF3A-218ENST00000600383 SCAND2PQ9GZW5 306 aaPredicted RBP17.64■□□□□ 0.41
HIF3A-218ENST00000600383 DDX4Q9NQI0 724 aaKnown RBP17.64■□□□□ 0.41
HIF3A-218ENST00000600383 TMEM63CQ9P1W3 806 aa17.64■□□□□ 0.41
HIF3A-218ENST00000600383 LAMB1P07942 1786 aa17.64■□□□□ 0.41
HIF3A-218ENST00000600383 GOLGA6L3A6NEY3 463 aa17.63■□□□□ 0.41
HIF3A-218ENST00000600383 FMNL1O95466 1100 aaPredicted RBP17.63■□□□□ 0.41
HIF3A-218ENST00000600383 GUCY1A2P33402 732 aa17.63■□□□□ 0.41
HIF3A-218ENST00000600383 TROAPQ12815 778 aa17.63■□□□□ 0.41
HIF3A-218ENST00000600383 CRACR2BQ8N4Y2 399 aaPredicted RBP17.63■□□□□ 0.41
HIF3A-218ENST00000600383 RASA1P20936 1047 aa17.63■□□□□ 0.41
HIF3A-218ENST00000600383 RCAN1P53805 252 aa17.63■□□□□ 0.41
HIF3A-218ENST00000600383 CACNB3P54284 484 aa17.63■□□□□ 0.41
HIF3A-218ENST00000600383 TRIM29Q14134 588 aa17.63■□□□□ 0.41
HIF3A-218ENST00000600383 ZSCAN23Q3MJ62 389 aa17.63■□□□□ 0.41
HIF3A-218ENST00000600383 CFAP45Q9UL16 551 aa17.63■□□□□ 0.41
HIF3A-218ENST00000600383 STX8Q9UNK0 236 aa17.63■□□□□ 0.41
HIF3A-218ENST00000600383 SCN9AQ15858 1988 aa17.63■□□□□ 0.41
HIF3A-218ENST00000600383 RAD17O75943 681 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 TGFB2P61812 414 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 GRIPAP1Q4V328 841 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 KRT40Q6A162 431 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 RCSD1Q6JBY9 416 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 C16orf86Q6ZW13 317 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 LEO1Q8WVC0 666 aaPredicted RBP17.62■□□□□ 0.41
HIF3A-218ENST00000600383 FTOQ9C0B1 505 aaKnown RBP eCLIP17.62■□□□□ 0.41
HIF3A-218ENST00000600383 KAT14Q9H8E8 782 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 MTMR7Q9Y216 660 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 NAV1Q8NEY1 1877 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 ROBO3Q96MS0 1386 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 SNED1Q8TER0 1413 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 CDK5RAP2Q96SN8 1893 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 PSDA5PKW4 1024 aaPredicted RBP17.62■□□□□ 0.41
HIF3A-218ENST00000600383 GOLGA6L4A6NEF3 574 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 CALM1P0DP23 149 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 CALM2P0DP24 149 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 CALM3P0DP25 149 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 FKBP1AP62942 108 aaKnown RBP17.62■□□□□ 0.41
HIF3A-218ENST00000600383 TCP10Q12799 353 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 NFIAQ12857 509 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 GNL2Q13823 731 aaKnown RBP17.62■□□□□ 0.41
HIF3A-218ENST00000600383 PPP2R5BQ15173 497 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 ILDR1Q86SU0 546 aaPredicted RBP17.62■□□□□ 0.41
HIF3A-218ENST00000600383 NBPF11Q86T75 865 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 ZDHHC15Q96MV8 337 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 PSMD1Q99460 953 aa17.62■□□□□ 0.41
HIF3A-218ENST00000600383 hCG_1642624A0A1W2PR95 340 aa17.61■□□□□ 0.41
HIF3A-218ENST00000600383 PLEKHA8P1O95397 391 aa17.61■□□□□ 0.41
HIF3A-218ENST00000600383 AKAP17AQ02040 695 aaKnown RBP17.61■□□□□ 0.41
HIF3A-218ENST00000600383 CTCFLQ8NI51 663 aaPredicted RBP17.61■□□□□ 0.41
HIF3A-218ENST00000600383 DDAH1O94760 285 aa17.6■□□□□ 0.41
HIF3A-218ENST00000600383 DALRD3Q5D0E6 543 aaKnown RBP17.6■□□□□ 0.41
HIF3A-218ENST00000600383 GAS2L3Q86XJ1 694 aa17.6■□□□□ 0.41
HIF3A-218ENST00000600383 DGKHQ86XP1 1220 aa17.6■□□□□ 0.41
HIF3A-218ENST00000600383 WASF1Q92558 559 aa17.6■□□□□ 0.41
HIF3A-218ENST00000600383 ZNF396Q96N95 335 aaPredicted RBP17.6■□□□□ 0.41
HIF3A-218ENST00000600383 NID2Q14112 1375 aa17.6■□□□□ 0.41
HIF3A-218ENST00000600383 KIF28PB7ZC32 967 aa17.6■□□□□ 0.41
HIF3A-218ENST00000600383 DEXIO95424 95 aa17.6■□□□□ 0.41
HIF3A-218ENST00000600383 USP28Q96RU2 1077 aa17.6■□□□□ 0.41
HIF3A-218ENST00000600383 MRIQ9BWK5 157 aa17.6■□□□□ 0.41
HIF3A-218ENST00000600383 RBM28Q9NW13 759 aaKnown RBP17.6■□□□□ 0.41
HIF3A-218ENST00000600383 V9GY48 417 aaPredicted RBP17.6■□□□□ 0.41
HIF3A-218ENST00000600383 MYH1P12882 1939 aa17.6■□□□□ 0.41
HIF3A-218ENST00000600383 STK36Q9NRP7 1315 aa17.59■□□□□ 0.41
HIF3A-218ENST00000600383 SYCE3A1L190 88 aa17.59■□□□□ 0.41
HIF3A-218ENST00000600383 ZFPM1Q8IX07 1006 aa17.59■□□□□ 0.41
HIF3A-218ENST00000600383 PNMA1Q8ND90 353 aa17.59■□□□□ 0.41
HIF3A-218ENST00000600383 SYAP1Q96A49 352 aaPredicted RBP17.59■□□□□ 0.41
HIF3A-218ENST00000600383 OSBPL5Q9H0X9 879 aaPredicted RBP17.59■□□□□ 0.41
HIF3A-218ENST00000600383 ADAMTSL1Q8N6G6 1762 aa17.59■□□□□ 0.41
HIF3A-218ENST00000600383 ELP1O95163 1332 aa17.59■□□□□ 0.41
HIF3A-218ENST00000600383 KIF23Q02241 960 aaPredicted RBP17.59■□□□□ 0.41
HIF3A-218ENST00000600383 PIBF1Q8WXW3 757 aa17.59■□□□□ 0.41
HIF3A-218ENST00000600383 SERPINA10Q9UK55 444 aa17.59■□□□□ 0.41
HIF3A-218ENST00000600383 KCNJ14Q9UNX9 436 aa17.59■□□□□ 0.41
HIF3A-218ENST00000600383 PSMD14O00487 310 aa17.58■□□□□ 0.4
HIF3A-218ENST00000600383 HDLBPQ00341 1268 aaKnown RBP17.58■□□□□ 0.4
HIF3A-218ENST00000600383 CCDC178Q5BJE1 867 aa17.58■□□□□ 0.4
HIF3A-218ENST00000600383 ZSCAN29Q8IWY8 852 aaPredicted RBP17.58■□□□□ 0.4
HIF3A-218ENST00000600383 TCP11L1Q9NUJ3 509 aa17.58■□□□□ 0.4
HIF3A-218ENST00000600383 SERPINB13Q9UIV8 391 aa17.58■□□□□ 0.4
HIF3A-218ENST00000600383 CFAP100Q494V2 611 aa17.57■□□□□ 0.4
HIF3A-218ENST00000600383 SOGA3Q5TF21 947 aa17.57■□□□□ 0.4
HIF3A-218ENST00000600383 UPF1Q92900 1129 aaKnown RBP eCLIP17.57■□□□□ 0.4
HIF3A-218ENST00000600383 RNF26Q9BY78 433 aaPredicted RBP17.57■□□□□ 0.4
HIF3A-218ENST00000600383 TDRD3Q9H7E2 651 aaKnown RBP17.57■□□□□ 0.4
HIF3A-218ENST00000600383 ZBTB12Q9Y330 459 aaPredicted RBP17.57■□□□□ 0.4
HIF3A-218ENST00000600383 UTRNP46939 3433 aa17.57■□□□□ 0.4
HIF3A-218ENST00000600383 FSD2A1L4K1 749 aa17.57■□□□□ 0.4
HIF3A-218ENST00000600383 HLA-DOAP06340 250 aa17.57■□□□□ 0.4
HIF3A-218ENST00000600383 SLURP2P0DP57 97 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms