RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 CPVLQ9H3G5 476 aa13.24□□□□□ -0.29
ARHGEF1-220ENST00000600274 TMX1Q9H3N1 280 aa13.24□□□□□ -0.29
ARHGEF1-220ENST00000600274 SERTAD1Q9UHV2 236 aa13.24□□□□□ -0.29
ARHGEF1-220ENST00000600274 PCDHA5Q9Y5H7 936 aa13.24□□□□□ -0.29
ARHGEF1-220ENST00000600274 USP27XA6NNY8 438 aa13.24□□□□□ -0.29
ARHGEF1-220ENST00000600274 RIOK3O14730 519 aaKnown RBP13.24□□□□□ -0.29
ARHGEF1-220ENST00000600274 STX17P56962 302 aa13.24□□□□□ -0.29
ARHGEF1-220ENST00000600274 NLRP5P59047 1200 aa13.24□□□□□ -0.29
ARHGEF1-220ENST00000600274 RPGRQ92834 1020 aaKnown RBP13.24□□□□□ -0.29
ARHGEF1-220ENST00000600274 RIOK1Q9BRS2 568 aaKnown RBP13.24□□□□□ -0.29
ARHGEF1-220ENST00000600274 NARFQ9UHQ1 456 aa13.24□□□□□ -0.29
ARHGEF1-220ENST00000600274 DOT1LQ8TEK3 1739 aa13.24□□□□□ -0.29
ARHGEF1-220ENST00000600274 TAF1P21675 1872 aa13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 C6orf229H3BNL8 230 aa13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 RIMBP2O15034 1052 aa13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 TGFBRAP1Q8WUH2 860 aa13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 GPKOWQ92917 476 aaPredicted RBP eCLIP13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 NSUN4Q96CB9 384 aaKnown RBP13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 VAT1LQ9HCJ6 419 aa13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 VEGFAP15692 232 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 SF3B3Q15393 1217 aaKnown RBP13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 HOMER1Q86YM7 354 aa13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 RASGRP4Q8TDF6 673 aa13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 ZNF219Q9P2Y4 722 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 MYH14Q7Z406 1995 aaKnown RBP13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 VWA3AA6NCI4 1184 aa13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 RPS6KA4O75676 772 aa13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 CDC25AP30304 524 aa13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 GRIK5Q16478 980 aa13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 EARS2Q5JPH6 523 aaKnown RBP13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 BARGINQ6ZT62 677 aa13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 TMTC2Q8N394 836 aa13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 FBXL16Q8N461 479 aa13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 ZBTB9Q96C00 473 aa13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 NOL10Q9BSC4 688 aaKnown RBP13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 PAPPAQ13219 1627 aa13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 PNPLA7Q6ZV29 1317 aa13.23□□□□□ -0.29
ARHGEF1-220ENST00000600274 NWD2Q9ULI1 1742 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 LDHBP07195 334 aaKnown RBP13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 GOLGA8HP0CJ92 632 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 U2AF2P26368 475 aaKnown RBP eCLIP13.22□□□□□ -0.295e-6■■■□□ 17.8
ARHGEF1-220ENST00000600274 MCM7P33993 719 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 TOB1P50616 345 aaPredicted RBP13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 NLRP12P59046 1061 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 TFAP4Q01664 338 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 PIK3AP1Q6ZUJ8 805 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 EPSTI1Q96J88 318 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 PLIN2Q99541 437 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 DCP1AQ9NPI6 582 aaPredicted RBP13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 WDR19Q8NEZ3 1342 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 AKAP11Q9UKA4 1901 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 USP17L3A6NCW0 530 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 USP17L4A6NCW7 530 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 PRR29P0C7W0 189 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 PTPAQ15257 358 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 USP17L1Q7RTZ2 530 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 LRRC8AQ8IWT6 810 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 CSRNP2Q9H175 543 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 COL14A1Q05707 1796 aaKnown RBP13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 UFL1O94874 794 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 CAVIN2O95810 425 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 RASGRP2Q7LDG7 609 aa13.22□□□□□ -0.29
ARHGEF1-220ENST00000600274 TRIM75PA6NK02 468 aa13.21□□□□□ -0.29
ARHGEF1-220ENST00000600274 UBASH3AP57075 661 aa13.21□□□□□ -0.29
ARHGEF1-220ENST00000600274 SMYD4Q8IYR2 804 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF1-220ENST00000600274 BRMS1Q9HCU9 246 aa13.21□□□□□ -0.29
ARHGEF1-220ENST00000600274 FANCLQ9NW38 375 aa13.21□□□□□ -0.29
ARHGEF1-220ENST00000600274 NHSL1Q5SYE7 1610 aa13.21□□□□□ -0.29
ARHGEF1-220ENST00000600274 FANCCQ00597 558 aa13.21□□□□□ -0.3
ARHGEF1-220ENST00000600274 PICALMQ13492 652 aa13.21□□□□□ -0.3
ARHGEF1-220ENST00000600274 METTL16Q86W50 562 aaKnown RBP13.21□□□□□ -0.3
ARHGEF1-220ENST00000600274 SH3RF3Q8TEJ3 882 aaPredicted RBP13.21□□□□□ -0.3
ARHGEF1-220ENST00000600274 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.3
ARHGEF1-220ENST00000600274 MAP3K14Q99558 947 aa13.21□□□□□ -0.3
ARHGEF1-220ENST00000600274 KAT14Q9H8E8 782 aa13.21□□□□□ -0.3
ARHGEF1-220ENST00000600274 CUTAO60888 179 aa13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 SFPQP23246 707 aaKnown RBP eCLIP13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 KRT2P35908 639 aa13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 EIF6P56537 245 aaKnown RBP13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 PDE4BQ07343 736 aa13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 NAA30Q147X3 362 aaPredicted RBP13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 KRBA2Q6ZNG9 492 aa13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 MTERF4Q7Z6M4 381 aaKnown RBP13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 COL1A1P02452 1464 aaPredicted RBP13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 COL4A1P02462 1669 aa13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 WNT7AO00755 349 aa13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 ATP2B2Q01814 1243 aa13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 RILPL1Q5EBL4 403 aa13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 DPF2Q92785 391 aa13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 ANKRD2Q9GZV1 360 aa13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 SMTNL1A8MU46 457 aa13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 PES1O00541 588 aaKnown RBP13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 TSPY3P0CV98 308 aa13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 TSPY8P0CW00 308 aa13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 FOXP4Q8IVH2 680 aaPredicted RBP13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 SMARCE1Q969G3 411 aa13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 MAPK8IP1Q9UQF2 711 aa13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 RTL9Q8NET4 1388 aa13.2□□□□□ -0.3
ARHGEF1-220ENST00000600274 ATRNO75882 1429 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 1481 ms