RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 TRIM43Q96BQ3 446 aaPredicted RBP22.03■■□□□ 1.12
SSBP4-207ENST00000600244 EDC3Q96F86 508 aaKnown RBP22.03■■□□□ 1.12
SSBP4-207ENST00000600244 UHRF1Q96T88 793 aaPredicted RBP22.03■■□□□ 1.12
SSBP4-207ENST00000600244 EPHB4P54760 987 aa22.02■■□□□ 1.12
SSBP4-207ENST00000600244 SLC4A10Q6U841 1118 aa22.02■■□□□ 1.12
SSBP4-207ENST00000600244 AS3MTQ9HBK9 375 aa22.02■■□□□ 1.12
SSBP4-207ENST00000600244 ZBTB22O15209 634 aa22.01■■□□□ 1.11
SSBP4-207ENST00000600244 IGHA2P01877 340 aa22.01■■□□□ 1.11
SSBP4-207ENST00000600244 DNAJB2P25686 324 aa22.01■■□□□ 1.11
SSBP4-207ENST00000600244 BACE1P56817 501 aa22.01■■□□□ 1.11
SSBP4-207ENST00000600244 RHBDL3P58872 404 aa22.01■■□□□ 1.11
SSBP4-207ENST00000600244 TRIM60Q495X7 471 aa22.01■■□□□ 1.11
SSBP4-207ENST00000600244 RNPC3Q96LT9 517 aaKnown RBP22.01■■□□□ 1.11
SSBP4-207ENST00000600244 ZNF576Q9H609 170 aa22.01■■□□□ 1.11
SSBP4-207ENST00000600244 THEGQ9P2T0 379 aa22.01■■□□□ 1.11
SSBP4-207ENST00000600244 DENND2AQ9ULE3 1009 aa22.01■■□□□ 1.11
SSBP4-207ENST00000600244 FANCIQ9NVI1 1328 aa22.01■■□□□ 1.11
SSBP4-207ENST00000600244 SEMA3EO15041 775 aa22■■□□□ 1.11
SSBP4-207ENST00000600244 BTDP43251 543 aa22■■□□□ 1.11
SSBP4-207ENST00000600244 MRPS5P82675 430 aaKnown RBP22■■□□□ 1.11
SSBP4-207ENST00000600244 MTMR2Q13614 643 aa22■■□□□ 1.11
SSBP4-207ENST00000600244 GJC2Q5T442 439 aaPredicted RBP22■■□□□ 1.11
SSBP4-207ENST00000600244 CCAR1Q8IX12 1150 aaKnown RBP22■■□□□ 1.11
SSBP4-207ENST00000600244 TRPV1Q8NER1 839 aa22■■□□□ 1.11
SSBP4-207ENST00000600244 GNL3LQ9NVN8 582 aaKnown RBP22■■□□□ 1.11
SSBP4-207ENST00000600244 EYA2O00167 538 aa21.99■■□□□ 1.11
SSBP4-207ENST00000600244 ANP32CO43423 234 aa21.99■■□□□ 1.11
SSBP4-207ENST00000600244 ITGB8P26012 769 aa21.99■■□□□ 1.11
SSBP4-207ENST00000600244 CNGA1P29973 690 aa21.99■■□□□ 1.11
SSBP4-207ENST00000600244 AKNAD1Q5T1N1 836 aa21.99■■□□□ 1.11
SSBP4-207ENST00000600244 C1orf53Q5VUE5 145 aa21.99■■□□□ 1.11
SSBP4-207ENST00000600244 ARRDC4Q8NCT1 418 aa21.99■■□□□ 1.11
SSBP4-207ENST00000600244 C1QTNF1Q9BXJ1 281 aa21.99■■□□□ 1.11
SSBP4-207ENST00000600244 TMOD4Q9NZQ9 345 aa21.99■■□□□ 1.11
SSBP4-207ENST00000600244 ATAD5Q96QE3 1844 aa21.99■■□□□ 1.11
SSBP4-207ENST00000600244 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.98■■□□□ 1.11
SSBP4-207ENST00000600244 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.98■■□□□ 1.11
SSBP4-207ENST00000600244 HOXC6P09630 235 aa21.98■■□□□ 1.11
SSBP4-207ENST00000600244 DIEXFQ68CQ4 756 aaKnown RBP21.98■■□□□ 1.11
SSBP4-207ENST00000600244 SLF2Q8IX21 1173 aa21.98■■□□□ 1.11
SSBP4-207ENST00000600244 ZGPATQ8N5A5 531 aaKnown RBP21.98■■□□□ 1.11
SSBP4-207ENST00000600244 GTF3C2Q8WUA4 911 aaPredicted RBP21.98■■□□□ 1.11
SSBP4-207ENST00000600244 GPR75-ASB3A0A0A6YYF3 556 aa21.97■■□□□ 1.11
SSBP4-207ENST00000600244 C19orf81C9J6K1 198 aa21.97■■□□□ 1.11
SSBP4-207ENST00000600244 PHKA1P46020 1223 aa21.97■■□□□ 1.11
SSBP4-207ENST00000600244 RFX5P48382 616 aaPredicted RBP21.97■■□□□ 1.11
SSBP4-207ENST00000600244 EXOSC9Q06265 439 aaKnown RBP21.97■■□□□ 1.11
SSBP4-207ENST00000600244 ATG9AQ7Z3C6 839 aa21.97■■□□□ 1.11
SSBP4-207ENST00000600244 PPM1EQ8WY54 764 aa21.97■■□□□ 1.11
SSBP4-207ENST00000600244 PAGR1Q9BTK6 254 aa21.97■■□□□ 1.11
SSBP4-207ENST00000600244 PIEZO1Q92508 2521 aa21.97■■□□□ 1.11
SSBP4-207ENST00000600244 SLC15A5A6NIM6 579 aa21.96■■□□□ 1.11
SSBP4-207ENST00000600244 CYP2C19P33261 490 aa21.96■■□□□ 1.11
SSBP4-207ENST00000600244 JAG1P78504 1218 aa21.96■■□□□ 1.11
SSBP4-207ENST00000600244 DZIP1Q86YF9 867 aaKnown RBP21.96■■□□□ 1.11
SSBP4-207ENST00000600244 MROH7-TTC4A0A0A0MT08 1334 aa21.96■■□□□ 1.11
SSBP4-207ENST00000600244 GLRX3O76003 335 aaKnown RBP21.95■■□□□ 1.1
SSBP4-207ENST00000600244 CYBAP13498 195 aa21.95■■□□□ 1.1
SSBP4-207ENST00000600244 PTPREP23469 700 aa21.95■■□□□ 1.1
SSBP4-207ENST00000600244 ATP2B2Q01814 1243 aa21.95■■□□□ 1.1
SSBP4-207ENST00000600244 TLE2Q04725 743 aa21.95■■□□□ 1.1
SSBP4-207ENST00000600244 NPLOC4Q8TAT6 608 aa21.95■■□□□ 1.1
SSBP4-207ENST00000600244 TIFAQ96CG3 184 aa21.95■■□□□ 1.1
SSBP4-207ENST00000600244 KBTBD13C9JR72 458 aa21.94■■□□□ 1.1
SSBP4-207ENST00000600244 CNMDO75829 334 aa21.94■■□□□ 1.1
SSBP4-207ENST00000600244 ZNF384Q8TF68 577 aa21.94■■□□□ 1.1
SSBP4-207ENST00000600244 GAS2L1Q99501 681 aaPredicted RBP21.94■■□□□ 1.1
SSBP4-207ENST00000600244 HERC5Q9UII4 1024 aaKnown RBP21.94■■□□□ 1.1
SSBP4-207ENST00000600244 RABGAP1Q9Y3P9 1069 aa21.94■■□□□ 1.1
SSBP4-207ENST00000600244 TACC3Q9Y6A5 838 aa21.94■■□□□ 1.1
SSBP4-207ENST00000600244 NDUFB9Q9Y6M9 179 aa21.94■■□□□ 1.1
SSBP4-207ENST00000600244 ASNSP08243 561 aa21.93■■□□□ 1.1
SSBP4-207ENST00000600244 ADCYAP1R1P41586 468 aa21.93■■□□□ 1.1
SSBP4-207ENST00000600244 ATP2B3Q16720 1220 aa21.93■■□□□ 1.1
SSBP4-207ENST00000600244 MYO9BQ13459 2157 aa21.92■■□□□ 1.1
SSBP4-207ENST00000600244 USP17L10C9JJH3 530 aa21.92■■□□□ 1.1
SSBP4-207ENST00000600244 KIAA0355O15063 1070 aa21.92■■□□□ 1.1
SSBP4-207ENST00000600244 MAP4K4O95819 1239 aaPredicted RBP21.92■■□□□ 1.1
SSBP4-207ENST00000600244 GRB14Q14449 540 aa21.92■■□□□ 1.1
SSBP4-207ENST00000600244 CWC22Q9HCG8 908 aaKnown RBP21.92■■□□□ 1.1
SSBP4-207ENST00000600244 EMILIN3Q9NT22 766 aa21.92■■□□□ 1.1
SSBP4-207ENST00000600244 ABCF2Q9UG63 623 aa21.92■■□□□ 1.1
SSBP4-207ENST00000600244 ADGRE1Q14246 886 aa21.91■■□□□ 1.1
SSBP4-207ENST00000600244 NCBP3Q53F19 620 aaKnown RBP21.91■■□□□ 1.1
SSBP4-207ENST00000600244 NECAB3Q96P71 396 aaPredicted RBP21.91■■□□□ 1.1
SSBP4-207ENST00000600244 LRFN3Q9BTN0 628 aa21.91■■□□□ 1.1
SSBP4-207ENST00000600244 PDS5AQ29RF7 1337 aaKnown RBP21.9■■□□□ 1.1
SSBP4-207ENST00000600244 BMP1P13497 986 aa21.9■■□□□ 1.1
SSBP4-207ENST00000600244 CCNA1P78396 465 aa21.9■■□□□ 1.1
SSBP4-207ENST00000600244 MECOMQ03112 1051 aa21.9■■□□□ 1.1
SSBP4-207ENST00000600244 RASGRF1Q13972 1273 aa21.9■■□□□ 1.1
SSBP4-207ENST00000600244 ANO1Q5XXA6 986 aa21.9■■□□□ 1.1
SSBP4-207ENST00000600244 SPTY2D1Q68D10 685 aaPredicted RBP21.9■■□□□ 1.1
SSBP4-207ENST00000600244 CCDC102BQ68D86 513 aa21.9■■□□□ 1.1
SSBP4-207ENST00000600244 FERMT2Q96AC1 680 aa21.9■■□□□ 1.1
SSBP4-207ENST00000600244 PRDM12Q9H4Q4 367 aa21.9■■□□□ 1.1
SSBP4-207ENST00000600244 SEPT4O43236 478 aa21.89■■□□□ 1.09
SSBP4-207ENST00000600244 CLTBP09497 229 aa21.89■■□□□ 1.09
SSBP4-207ENST00000600244 FPGSQ05932 587 aa21.89■■□□□ 1.09
SSBP4-207ENST00000600244 LRRC41Q15345 812 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms