RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 GDF11O95390 407 aa13.89□□□□□ -0.19
HIF3A-217ENST00000600236 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.89□□□□□ -0.19
HIF3A-217ENST00000600236 GTF3C2Q8WUA4 911 aaPredicted RBP13.89□□□□□ -0.19
HIF3A-217ENST00000600236 HTATIP2Q9BUP3 242 aa13.89□□□□□ -0.19
HIF3A-217ENST00000600236 ASCC2Q9H1I8 757 aaPredicted RBP13.89□□□□□ -0.19
HIF3A-217ENST00000600236 EHD4Q9H223 541 aa13.89□□□□□ -0.19
HIF3A-217ENST00000600236 DNAJC18Q9H819 358 aa13.89□□□□□ -0.19
HIF3A-217ENST00000600236 SERPINB13Q9UIV8 391 aa13.89□□□□□ -0.19
HIF3A-217ENST00000600236 ZSWIM8A7E2V4 1837 aa13.89□□□□□ -0.19
HIF3A-217ENST00000600236 INHAP05111 366 aa13.88□□□□□ -0.19
HIF3A-217ENST00000600236 HOXA7P31268 230 aaPredicted RBP13.88□□□□□ -0.19
HIF3A-217ENST00000600236 U2AF1L4Q8WU68 220 aaKnown RBP13.88□□□□□ -0.19
HIF3A-217ENST00000600236 ANTXR1Q9H6X2 564 aa13.88□□□□□ -0.19
HIF3A-217ENST00000600236 COG6Q9Y2V7 657 aa13.88□□□□□ -0.19
HIF3A-217ENST00000600236 NDUFB9Q9Y6M9 179 aa13.88□□□□□ -0.19
HIF3A-217ENST00000600236 PDE4DIPQ5VU43 2346 aa13.88□□□□□ -0.19
HIF3A-217ENST00000600236 MAGEB6P1A0A0J9YX57 407 aa13.87□□□□□ -0.19
HIF3A-217ENST00000600236 APBB1O00213 710 aa13.87□□□□□ -0.19
HIF3A-217ENST00000600236 ELNP15502 786 aa13.87□□□□□ -0.19
HIF3A-217ENST00000600236 USP17L2Q6R6M4 530 aa13.87□□□□□ -0.19
HIF3A-217ENST00000600236 CCAR1Q8IX12 1150 aaKnown RBP13.87□□□□□ -0.19
HIF3A-217ENST00000600236 SHISA4Q96DD7 197 aa13.87□□□□□ -0.19
HIF3A-217ENST00000600236 DNAJC2Q99543 621 aaKnown RBP13.87□□□□□ -0.19
HIF3A-217ENST00000600236 FEZ1Q99689 392 aa13.87□□□□□ -0.19
HIF3A-217ENST00000600236 CRNKL1Q9BZJ0 848 aaKnown RBP13.87□□□□□ -0.19
HIF3A-217ENST00000600236 CABP5Q9NP86 173 aa13.87□□□□□ -0.19
HIF3A-217ENST00000600236 ZBTB40Q9NUA8 1239 aa13.87□□□□□ -0.19
HIF3A-217ENST00000600236 PCDH10Q9P2E7 1040 aa13.87□□□□□ -0.19
HIF3A-217ENST00000600236 MORF4L1Q9UBU8 362 aa13.87□□□□□ -0.19
HIF3A-217ENST00000600236 RCAN3Q9UKA8 241 aa13.87□□□□□ -0.19
HIF3A-217ENST00000600236 SGPL1O95470 568 aa13.86□□□□□ -0.19
HIF3A-217ENST00000600236 GH2P01242 217 aa13.86□□□□□ -0.19
HIF3A-217ENST00000600236 POLR3DP05423 398 aaPredicted RBP13.86□□□□□ -0.19
HIF3A-217ENST00000600236 USP14P54578 494 aa13.86□□□□□ -0.19
HIF3A-217ENST00000600236 SLC9C2Q5TAH2 1124 aa13.86□□□□□ -0.19
HIF3A-217ENST00000600236 TATDN1Q6P1N9 297 aa13.86□□□□□ -0.19
HIF3A-217ENST00000600236 DPF3Q92784 378 aa13.86□□□□□ -0.19
HIF3A-217ENST00000600236 BCL11AQ9H165 835 aa13.86□□□□□ -0.19
HIF3A-217ENST00000600236 UNC93B1Q9H1C4 597 aa13.86□□□□□ -0.19
HIF3A-217ENST00000600236 PHIPQ8WWQ0 1821 aa13.85□□□□□ -0.19
HIF3A-217ENST00000600236 GOLIM4O00461 696 aa13.85□□□□□ -0.19
HIF3A-217ENST00000600236 FARP2O94887 1054 aaPredicted RBP13.85□□□□□ -0.19
HIF3A-217ENST00000600236 HMGCRP04035 888 aa13.85□□□□□ -0.19
HIF3A-217ENST00000600236 PDE6AP16499 860 aa13.85□□□□□ -0.19
HIF3A-217ENST00000600236 HERVK_113P62684 666 aa13.85□□□□□ -0.19
HIF3A-217ENST00000600236 PDE3AQ14432 1141 aa13.85□□□□□ -0.19
HIF3A-217ENST00000600236 RAB3GAP1Q15042 981 aa13.85□□□□□ -0.19
HIF3A-217ENST00000600236 ABCB5Q2M3G0 1257 aa13.85□□□□□ -0.19
HIF3A-217ENST00000600236 CERKLQ49MI3 558 aaPredicted RBP13.85□□□□□ -0.19
HIF3A-217ENST00000600236 HABP4Q5JVS0 413 aaKnown RBP13.85□□□□□ -0.19
HIF3A-217ENST00000600236 GPRC5AQ8NFJ5 357 aa13.85□□□□□ -0.19
HIF3A-217ENST00000600236 SOCS4Q8WXH5 440 aa13.85□□□□□ -0.19
HIF3A-217ENST00000600236 RIOK1Q9BRS2 568 aaKnown RBP13.85□□□□□ -0.19
HIF3A-217ENST00000600236 CWC22Q9HCG8 908 aaKnown RBP13.85□□□□□ -0.19
HIF3A-217ENST00000600236 LOC285556D6RIA3 1793 aa13.85□□□□□ -0.19
HIF3A-217ENST00000600236 TFRCP02786 760 aaKnown RBP13.84□□□□□ -0.19
HIF3A-217ENST00000600236 MAPK4P31152 587 aa13.84□□□□□ -0.19
HIF3A-217ENST00000600236 JAG1P78504 1218 aa13.84□□□□□ -0.19
HIF3A-217ENST00000600236 C12orf42Q96LP6 360 aa13.84□□□□□ -0.19
HIF3A-217ENST00000600236 DEFB118Q96PH6 123 aa13.84□□□□□ -0.19
HIF3A-217ENST00000600236 P2RX7Q99572 595 aaKnown RBP13.84□□□□□ -0.19
HIF3A-217ENST00000600236 NUDT12Q9BQG2 462 aa13.84□□□□□ -0.19
HIF3A-217ENST00000600236 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.84□□□□□ -0.19
HIF3A-217ENST00000600236 ZNF532Q9HCE3 1301 aa13.84□□□□□ -0.19
HIF3A-217ENST00000600236 PTPRFP10586 1907 aa13.84□□□□□ -0.19
HIF3A-217ENST00000600236 USP17L15C9J2P7 530 aa13.83□□□□□ -0.2
HIF3A-217ENST00000600236 USP17L13C9JLJ4 530 aa13.83□□□□□ -0.2
HIF3A-217ENST00000600236 USP17L11C9JVI0 530 aa13.83□□□□□ -0.2
HIF3A-217ENST00000600236 USP17L18D6R9N7 530 aa13.83□□□□□ -0.2
HIF3A-217ENST00000600236 USP17L22D6RA61 530 aa13.83□□□□□ -0.2
HIF3A-217ENST00000600236 USP17L17D6RBQ6 530 aa13.83□□□□□ -0.2
HIF3A-217ENST00000600236 USP17L19D6RCP7 530 aa13.83□□□□□ -0.2
HIF3A-217ENST00000600236 USP17L20D6RJB6 530 aa13.83□□□□□ -0.2
HIF3A-217ENST00000600236 USP17L24Q0WX57 530 aa13.83□□□□□ -0.2
HIF3A-217ENST00000600236 AMOTL1Q8IY63 956 aa13.83□□□□□ -0.2
HIF3A-217ENST00000600236 PAK6Q9NQU5 681 aaPredicted RBP13.83□□□□□ -0.2
HIF3A-217ENST00000600236 EMILIN3Q9NT22 766 aa13.83□□□□□ -0.2
HIF3A-217ENST00000600236 PAG1Q9NWQ8 432 aa13.83□□□□□ -0.2
HIF3A-217ENST00000600236 MCM9Q9NXL9 1143 aa13.83□□□□□ -0.2
HIF3A-217ENST00000600236 NR2E3Q9Y5X4 410 aa13.83□□□□□ -0.2
HIF3A-217ENST00000600236 KIAA0100Q14667 2235 aaKnown RBP13.83□□□□□ -0.2
HIF3A-217ENST00000600236 ERVK-9P63128 1117 aa13.82□□□□□ -0.2
HIF3A-217ENST00000600236 ERVK-24P63145 666 aa13.82□□□□□ -0.2
HIF3A-217ENST00000600236 CCNA1P78396 465 aa13.82□□□□□ -0.2
HIF3A-217ENST00000600236 ZYXQ15942 572 aaKnown RBP13.82□□□□□ -0.2
HIF3A-217ENST00000600236 SHROOM1Q2M3G4 852 aaPredicted RBP13.82□□□□□ -0.2
HIF3A-217ENST00000600236 SIRT2Q8IXJ6 389 aa13.82□□□□□ -0.2
HIF3A-217ENST00000600236 TRMT44Q8IYL2 757 aaKnown RBP13.82□□□□□ -0.2
HIF3A-217ENST00000600236 DDRGK1Q96HY6 314 aa13.82□□□□□ -0.2
HIF3A-217ENST00000600236 PAGR1Q9BTK6 254 aa13.82□□□□□ -0.2
HIF3A-217ENST00000600236 LRRCC1Q9C099 1032 aa13.82□□□□□ -0.2
HIF3A-217ENST00000600236 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.82□□□□□ -0.2
HIF3A-217ENST00000600236 HMX1Q9NP08 348 aaPredicted RBP13.82□□□□□ -0.2
HIF3A-217ENST00000600236 GJD2Q9UKL4 321 aa13.82□□□□□ -0.2
HIF3A-217ENST00000600236 SIPA1L1O43166 1804 aa13.82□□□□□ -0.2
HIF3A-217ENST00000600236 ATAD5Q96QE3 1844 aa13.82□□□□□ -0.2
HIF3A-217ENST00000600236 RPTORQ8N122 1335 aa13.82□□□□□ -0.2
HIF3A-217ENST00000600236 H0YGN5 161 aa13.81□□□□□ -0.2
HIF3A-217ENST00000600236 MPHOSPH10O00566 681 aaKnown RBP13.81□□□□□ -0.2
HIF3A-217ENST00000600236 GLRX3O76003 335 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms