RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 FGRP09769 529 aa16.41■□□□□ 0.22
VRK3-219ENST00000600137 ZBTB48P10074 688 aaPredicted RBP16.41■□□□□ 0.22
VRK3-219ENST00000600137 PPATQ06203 517 aa16.41■□□□□ 0.22
VRK3-219ENST00000600137 NOGQ13253 232 aa16.41■□□□□ 0.22
VRK3-219ENST00000600137 GRM1Q13255 1194 aa16.41■□□□□ 0.22
VRK3-219ENST00000600137 PAXIP1Q6ZW49 1069 aaPredicted RBP16.41■□□□□ 0.22
VRK3-219ENST00000600137 DDRGK1Q96HY6 314 aa16.41■□□□□ 0.22
VRK3-219ENST00000600137 ESYT1Q9BSJ8 1104 aa16.41■□□□□ 0.22
VRK3-219ENST00000600137 NBPF3Q9H094 633 aa16.41■□□□□ 0.22
VRK3-219ENST00000600137 INCENPQ9NQS7 918 aa16.41■□□□□ 0.22
VRK3-219ENST00000600137 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.41■□□□□ 0.22
VRK3-219ENST00000600137 AFG3L2Q9Y4W6 797 aa16.41■□□□□ 0.22
VRK3-219ENST00000600137 TESPA1A2RU30 521 aaPredicted RBP16.4■□□□□ 0.22
VRK3-219ENST00000600137 MFAP1P55081 439 aaKnown RBP16.4■□□□□ 0.22
VRK3-219ENST00000600137 PPARAQ07869 468 aa16.4■□□□□ 0.22
VRK3-219ENST00000600137 MKRN3Q13064 507 aaKnown RBP16.4■□□□□ 0.22
VRK3-219ENST00000600137 PPIL2Q13356 520 aa16.4■□□□□ 0.22
VRK3-219ENST00000600137 MOGSQ13724 837 aa16.4■□□□□ 0.22
VRK3-219ENST00000600137 CERKLQ49MI3 558 aaPredicted RBP16.4■□□□□ 0.22
VRK3-219ENST00000600137 NKX2-3Q8TAU0 364 aa16.4■□□□□ 0.22
VRK3-219ENST00000600137 RUFY2Q8WXA3 655 aa16.4■□□□□ 0.22
VRK3-219ENST00000600137 OTUD5Q96G74 571 aa16.4■□□□□ 0.22
VRK3-219ENST00000600137 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.4■□□□□ 0.22
VRK3-219ENST00000600137 SWAP70Q9UH65 585 aa16.4■□□□□ 0.22
VRK3-219ENST00000600137 KCNH4Q9UQ05 1017 aa16.4■□□□□ 0.22
VRK3-219ENST00000600137 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.4■□□□□ 0.22
VRK3-219ENST00000600137 RASA1P20936 1047 aa16.39■□□□□ 0.21
VRK3-219ENST00000600137 TM4SF4P48230 202 aa16.39■□□□□ 0.21
VRK3-219ENST00000600137 CTDSPL2Q05D32 466 aa16.39■□□□□ 0.21
VRK3-219ENST00000600137 SIAH1Q8IUQ4 282 aa16.39■□□□□ 0.21
VRK3-219ENST00000600137 PTPN18Q99952 460 aa16.39■□□□□ 0.21
VRK3-219ENST00000600137 GINM1Q9NU53 330 aa16.39■□□□□ 0.21
VRK3-219ENST00000600137 ZBTB21Q9ULJ3 1066 aa16.39■□□□□ 0.21
VRK3-219ENST00000600137 GTF3C3Q9Y5Q9 886 aa16.39■□□□□ 0.21
VRK3-219ENST00000600137 ZHX2Q9Y6X8 837 aa16.39■□□□□ 0.21
VRK3-219ENST00000600137 PTPRFP10586 1907 aa16.39■□□□□ 0.21
VRK3-219ENST00000600137 MYH8P13535 1937 aa16.39■□□□□ 0.21
VRK3-219ENST00000600137 GREB1LQ9C091 1923 aaPredicted RBP16.39■□□□□ 0.21
VRK3-219ENST00000600137 CDC45O75419 566 aa16.38■□□□□ 0.21
VRK3-219ENST00000600137 GH2P01242 217 aa16.38■□□□□ 0.21
VRK3-219ENST00000600137 AKR1B1P15121 316 aa16.38■□□□□ 0.21
VRK3-219ENST00000600137 STK11IPQ8N1F8 1099 aa16.38■□□□□ 0.21
VRK3-219ENST00000600137 MAP4K1Q92918 833 aa16.38■□□□□ 0.21
VRK3-219ENST00000600137 WDR18Q9BV38 432 aa16.38■□□□□ 0.21
VRK3-219ENST00000600137 TRIM34Q9BYJ4 488 aa16.38■□□□□ 0.21
VRK3-219ENST00000600137 LSG1Q9H089 658 aaKnown RBP16.38■□□□□ 0.21
VRK3-219ENST00000600137 USP17L5A8MUK1 530 aa16.37■□□□□ 0.21
VRK3-219ENST00000600137 CXCL11O14625 94 aa16.37■□□□□ 0.21
VRK3-219ENST00000600137 ASNSP08243 561 aa16.37■□□□□ 0.21
VRK3-219ENST00000600137 ABCB5Q2M3G0 1257 aa16.37■□□□□ 0.21
VRK3-219ENST00000600137 AMOTL1Q8IY63 956 aa16.37■□□□□ 0.21
VRK3-219ENST00000600137 BRI3BPQ8WY22 251 aa16.37■□□□□ 0.21
VRK3-219ENST00000600137 PICK1Q9NRD5 415 aa16.37■□□□□ 0.21
VRK3-219ENST00000600137 WBP1LQ9NX94 342 aa16.37■□□□□ 0.21
VRK3-219ENST00000600137 MANSC4A6NHS7 340 aaPredicted RBP16.36■□□□□ 0.21
VRK3-219ENST00000600137 PRDM1O75626 825 aa16.36■□□□□ 0.21
VRK3-219ENST00000600137 HAND2P61296 217 aa16.36■□□□□ 0.21
VRK3-219ENST00000600137 SEPT2Q15019 361 aa16.36■□□□□ 0.21
VRK3-219ENST00000600137 CCDC17Q96LX7 622 aa16.36■□□□□ 0.21
VRK3-219ENST00000600137 LAMA4Q16363 1823 aa16.35■□□□□ 0.21
VRK3-219ENST00000600137 IGKV6D-41A0A0C4DH26 115 aa16.35■□□□□ 0.21
VRK3-219ENST00000600137 A0A0G2JLL6 359 aaPredicted RBP16.35■□□□□ 0.21
VRK3-219ENST00000600137 IGF2BP3O00425 579 aaKnown RBP eCLIP16.35■□□□□ 0.21
VRK3-219ENST00000600137 ORC4O43929 436 aa16.35■□□□□ 0.21
VRK3-219ENST00000600137 SPP2Q13103 211 aa16.35■□□□□ 0.21
VRK3-219ENST00000600137 PRRT2Q7Z6L0 340 aaPredicted RBP16.35■□□□□ 0.21
VRK3-219ENST00000600137 TBC1D10CQ8IV04 446 aa16.35■□□□□ 0.21
VRK3-219ENST00000600137 TAF6LQ9Y6J9 622 aa16.35■□□□□ 0.21
VRK3-219ENST00000600137 A0A1W2PRG0 241 aa16.34■□□□□ 0.21
VRK3-219ENST00000600137 GTF2A2P52657 109 aa16.34■□□□□ 0.21
VRK3-219ENST00000600137 INHBEP58166 350 aa16.34■□□□□ 0.21
VRK3-219ENST00000600137 SH3D19Q5HYK7 790 aa16.34■□□□□ 0.21
VRK3-219ENST00000600137 GPAT2Q6NUI2 795 aa16.34■□□□□ 0.21
VRK3-219ENST00000600137 TMEM179Q6ZVK1 233 aa16.34■□□□□ 0.21
VRK3-219ENST00000600137 CLEC10AQ8IUN9 316 aa16.34■□□□□ 0.21
VRK3-219ENST00000600137 REM2Q8IYK8 340 aaPredicted RBP16.34■□□□□ 0.21
VRK3-219ENST00000600137 ZNF280CQ8ND82 737 aa16.34■□□□□ 0.21
VRK3-219ENST00000600137 ACER1Q8TDN7 264 aa16.34■□□□□ 0.21
VRK3-219ENST00000600137 STAG1Q8WVM7 1258 aa16.34■□□□□ 0.21
VRK3-219ENST00000600137 MKNK2Q9HBH9 465 aa16.34■□□□□ 0.21
VRK3-219ENST00000600137 CCL15-CCL14A0A0B4J2E2 113 aa16.33■□□□□ 0.2
VRK3-219ENST00000600137 ZNF213O14771 459 aa16.33■□□□□ 0.2
VRK3-219ENST00000600137 CYP21A2P08686 494 aa16.33■□□□□ 0.2
VRK3-219ENST00000600137 PDE4BQ07343 736 aa16.33■□□□□ 0.2
VRK3-219ENST00000600137 SNAPC2Q13487 334 aa16.33■□□□□ 0.2
VRK3-219ENST00000600137 DGKZQ13574 1117 aa16.33■□□□□ 0.2
VRK3-219ENST00000600137 NECTIN1Q15223 517 aa16.33■□□□□ 0.2
VRK3-219ENST00000600137 CCL15Q16663 113 aa16.33■□□□□ 0.2
VRK3-219ENST00000600137 AKNAD1Q5T1N1 836 aa16.33■□□□□ 0.2
VRK3-219ENST00000600137 IFNL1Q8IU54 200 aa16.33■□□□□ 0.2
VRK3-219ENST00000600137 NEDD1Q8NHV4 660 aa16.33■□□□□ 0.2
VRK3-219ENST00000600137 TBC1D2Q9BYX2 928 aa16.33■□□□□ 0.2
VRK3-219ENST00000600137 CABP5Q9NP86 173 aa16.33■□□□□ 0.2
VRK3-219ENST00000600137 TRIM75PA6NK02 468 aa16.32■□□□□ 0.2
VRK3-219ENST00000600137 BTBD19C9JJ37 291 aa16.32■□□□□ 0.2
VRK3-219ENST00000600137 CETPP11597 493 aa16.32■□□□□ 0.2
VRK3-219ENST00000600137 BACE1P56817 501 aa16.32■□□□□ 0.2
VRK3-219ENST00000600137 MAP2K1Q02750 393 aaPredicted RBP16.32■□□□□ 0.2
VRK3-219ENST00000600137 RAB3GAP1Q15042 981 aa16.32■□□□□ 0.2
VRK3-219ENST00000600137 FAM47AQ5JRC9 791 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms