RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 CXCL11O14625 94 aa18.24■□□□□ 0.51
LIG1-219ENST00000600055 APPP05067 770 aa18.24■□□□□ 0.51
LIG1-219ENST00000600055 GSPT1P15170 499 aaKnown RBP18.24■□□□□ 0.51
LIG1-219ENST00000600055 NMIQ13287 307 aaPredicted RBP18.24■□□□□ 0.51
LIG1-219ENST00000600055 MOGSQ13724 837 aa18.24■□□□□ 0.51
LIG1-219ENST00000600055 TTC22Q5TAA0 569 aa18.24■□□□□ 0.51
LIG1-219ENST00000600055 CENPQQ7L2Z9 268 aaPredicted RBP18.24■□□□□ 0.51
LIG1-219ENST00000600055 USP17L5A8MUK1 530 aa18.23■□□□□ 0.51
LIG1-219ENST00000600055 PATL2C9JE40 543 aaKnown RBP18.23■□□□□ 0.51
LIG1-219ENST00000600055 ALDH1A1P00352 501 aa18.23■□□□□ 0.51
LIG1-219ENST00000600055 GH2P01242 217 aa18.23■□□□□ 0.51
LIG1-219ENST00000600055 GNAT2P19087 354 aa18.23■□□□□ 0.51
LIG1-219ENST00000600055 SDSP20132 328 aa18.23■□□□□ 0.51
LIG1-219ENST00000600055 CERKLQ49MI3 558 aaPredicted RBP18.23■□□□□ 0.51
LIG1-219ENST00000600055 OTUD7BQ6GQQ9 843 aa18.23■□□□□ 0.51
LIG1-219ENST00000600055 HELLSQ9NRZ9 838 aa18.23■□□□□ 0.51
LIG1-219ENST00000600055 ZBTB21Q9ULJ3 1066 aa18.23■□□□□ 0.51
LIG1-219ENST00000600055 LAMB1P07942 1786 aa18.22■□□□□ 0.51
LIG1-219ENST00000600055 A0A0G2JLL6 359 aaPredicted RBP18.22■□□□□ 0.51
LIG1-219ENST00000600055 FOXP2O15409 715 aa18.22■□□□□ 0.51
LIG1-219ENST00000600055 ASNSP08243 561 aa18.22■□□□□ 0.51
LIG1-219ENST00000600055 SPP2Q13103 211 aa18.22■□□□□ 0.51
LIG1-219ENST00000600055 GIMAP6Q6P9H5 292 aa18.22■□□□□ 0.51
LIG1-219ENST00000600055 PRRT2Q7Z6L0 340 aaPredicted RBP18.22■□□□□ 0.51
LIG1-219ENST00000600055 AMOTL1Q8IY63 956 aa18.22■□□□□ 0.51
LIG1-219ENST00000600055 IFNL3Q8IZI9 196 aa18.22■□□□□ 0.51
LIG1-219ENST00000600055 CCDC136Q96JN2 1154 aa18.22■□□□□ 0.51
LIG1-219ENST00000600055 BAZ2AQ9UIF9 1905 aaKnown RBP18.21■□□□□ 0.51
LIG1-219ENST00000600055 MINDY4BA8MYZ0 360 aa18.21■□□□□ 0.51
LIG1-219ENST00000600055 TDO2P48775 406 aa18.21■□□□□ 0.51
LIG1-219ENST00000600055 CDK8P49336 464 aa18.21■□□□□ 0.51
LIG1-219ENST00000600055 CRHR2Q13324 411 aa18.21■□□□□ 0.51
LIG1-219ENST00000600055 DGKZQ13574 1117 aa18.21■□□□□ 0.51
LIG1-219ENST00000600055 ABCB5Q2M3G0 1257 aa18.21■□□□□ 0.51
LIG1-219ENST00000600055 MCMDC2Q4G0Z9 681 aa18.21■□□□□ 0.51
LIG1-219ENST00000600055 SBK1Q52WX2 424 aa18.21■□□□□ 0.51
LIG1-219ENST00000600055 VPS53Q5VIR6 699 aa18.21■□□□□ 0.51
LIG1-219ENST00000600055 GPAT2Q6NUI2 795 aa18.21■□□□□ 0.51
LIG1-219ENST00000600055 GADL1Q6ZQY3 521 aa18.21■□□□□ 0.51
LIG1-219ENST00000600055 ZNF589Q86UQ0 364 aaPredicted RBP18.21■□□□□ 0.51
LIG1-219ENST00000600055 STK11IPQ8N1F8 1099 aa18.21■□□□□ 0.51
LIG1-219ENST00000600055 ZNF280CQ8ND82 737 aa18.21■□□□□ 0.51
LIG1-219ENST00000600055 CFHR5Q9BXR6 569 aa18.21■□□□□ 0.51
LIG1-219ENST00000600055 ARPP21Q9UBL0 812 aaPredicted RBP18.21■□□□□ 0.51
LIG1-219ENST00000600055 GUCY1A2P33402 732 aa18.2■□□□□ 0.5
LIG1-219ENST00000600055 TAF1CQ15572 869 aaPredicted RBP18.2■□□□□ 0.5
LIG1-219ENST00000600055 C16orf86Q6ZW13 317 aa18.2■□□□□ 0.5
LIG1-219ENST00000600055 ANKRD23Q86SG2 305 aa18.2■□□□□ 0.5
LIG1-219ENST00000600055 TICAM2Q86XR7 235 aa18.2■□□□□ 0.5
LIG1-219ENST00000600055 GINM1Q9NU53 330 aa18.2■□□□□ 0.5
LIG1-219ENST00000600055 SWAP70Q9UH65 585 aa18.2■□□□□ 0.5
LIG1-219ENST00000600055 PHIPQ8WWQ0 1821 aa18.2■□□□□ 0.5
LIG1-219ENST00000600055 ATAD5Q96QE3 1844 aa18.19■□□□□ 0.5
LIG1-219ENST00000600055 GPR25O00155 361 aa18.19■□□□□ 0.5
LIG1-219ENST00000600055 MPHOSPH10O00566 681 aaKnown RBP18.19■□□□□ 0.5
LIG1-219ENST00000600055 RAB3GAP1Q15042 981 aa18.19■□□□□ 0.5
LIG1-219ENST00000600055 WDR18Q9BV38 432 aa18.19■□□□□ 0.5
LIG1-219ENST00000600055 TBC1D2Q9BYX2 928 aa18.19■□□□□ 0.5
LIG1-219ENST00000600055 NACAP1Q9BZK3 213 aa18.19■□□□□ 0.5
LIG1-219ENST00000600055 AS3MTQ9HBK9 375 aa18.19■□□□□ 0.5
LIG1-219ENST00000600055 PDHXO00330 501 aa18.18■□□□□ 0.5
LIG1-219ENST00000600055 AKR1B1P15121 316 aa18.18■□□□□ 0.5
LIG1-219ENST00000600055 HMGCS2P54868 508 aa18.18■□□□□ 0.5
LIG1-219ENST00000600055 MTMR2Q13614 643 aa18.18■□□□□ 0.5
LIG1-219ENST00000600055 SEPT2Q15019 361 aa18.18■□□□□ 0.5
LIG1-219ENST00000600055 CWC27Q6UX04 472 aaKnown RBP18.18■□□□□ 0.5
LIG1-219ENST00000600055 FASTKD5Q7L8L6 764 aaKnown RBP18.18■□□□□ 0.5
LIG1-219ENST00000600055 ZNF296Q8WUU4 475 aaPredicted RBP18.18■□□□□ 0.5
LIG1-219ENST00000600055 NAPBQ9H115 298 aa18.18■□□□□ 0.5
LIG1-219ENST00000600055 CABP5Q9NP86 173 aa18.18■□□□□ 0.5
LIG1-219ENST00000600055 DIAPH3Q9NSV4 1193 aa18.18■□□□□ 0.5
LIG1-219ENST00000600055 TREML2Q5T2D2 321 aa18.17■□□□□ 0.5
LIG1-219ENST00000600055 ZFYVE28Q9HCC9 887 aa18.17■□□□□ 0.5
LIG1-219ENST00000600055 CCDC171Q6TFL3 1326 aa18.17■□□□□ 0.5
LIG1-219ENST00000600055 USP17L10C9JJH3 530 aa18.16■□□□□ 0.5
LIG1-219ENST00000600055 BACE1P56817 501 aa18.16■□□□□ 0.5
LIG1-219ENST00000600055 SH3D19Q5HYK7 790 aa18.16■□□□□ 0.5
LIG1-219ENST00000600055 CLEC10AQ8IUN9 316 aa18.16■□□□□ 0.5
LIG1-219ENST00000600055 ACER1Q8TDN7 264 aa18.16■□□□□ 0.5
LIG1-219ENST00000600055 ZCCHC17Q9NP64 241 aaKnown RBP18.16■□□□□ 0.5
LIG1-219ENST00000600055 TAOK2Q9UL54 1235 aa18.16■□□□□ 0.5
LIG1-219ENST00000600055 ROBO3Q96MS0 1386 aa18.16■□□□□ 0.5
LIG1-219ENST00000600055 HIP1O00291 1037 aa18.15■□□□□ 0.5
LIG1-219ENST00000600055 FKTNO75072 461 aa18.15■□□□□ 0.5
LIG1-219ENST00000600055 CYP2C8P10632 490 aa18.15■□□□□ 0.5
LIG1-219ENST00000600055 HSPD1P10809 573 aaKnown RBP18.15■□□□□ 0.5
LIG1-219ENST00000600055 PPARAQ07869 468 aa18.15■□□□□ 0.5
LIG1-219ENST00000600055 ZYXQ15942 572 aaKnown RBP18.15■□□□□ 0.5
LIG1-219ENST00000600055 NOM1Q5C9Z4 860 aaKnown RBP18.15■□□□□ 0.5
LIG1-219ENST00000600055 IL25Q9H293 177 aa18.15■□□□□ 0.5
LIG1-219ENST00000600055 AGTPBP1Q9UPW5 1226 aa18.15■□□□□ 0.5
LIG1-219ENST00000600055 CASP8AP2Q9UKL3 1982 aa18.14■□□□□ 0.49
LIG1-219ENST00000600055 PRDM1O75626 825 aa18.14■□□□□ 0.49
LIG1-219ENST00000600055 FGAP02671 866 aa18.14■□□□□ 0.49
LIG1-219ENST00000600055 RASA1P20936 1047 aa18.14■□□□□ 0.49
LIG1-219ENST00000600055 CTDSPL2Q05D32 466 aa18.14■□□□□ 0.49
LIG1-219ENST00000600055 ALX1Q15699 326 aa18.14■□□□□ 0.49
LIG1-219ENST00000600055 TMEM179Q6ZVK1 233 aa18.14■□□□□ 0.49
LIG1-219ENST00000600055 PROCA1Q8NCQ7 364 aaPredicted RBP18.14■□□□□ 0.49
LIG1-219ENST00000600055 CCDC17Q96LX7 622 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms