RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 FBXO46Q6PJ61 603 aaPredicted RBP9.62□□□□□ -0.87
CHMP2A-205ENST00000600006 OTOP1Q7RTM1 612 aa9.62□□□□□ -0.87
CHMP2A-205ENST00000600006 PROCA1Q8NCQ7 364 aaPredicted RBP9.62□□□□□ -0.87
CHMP2A-205ENST00000600006 CD99L2Q8TCZ2 262 aa9.62□□□□□ -0.87
CHMP2A-205ENST00000600006 APPBP2Q92624 585 aa9.62□□□□□ -0.87
CHMP2A-205ENST00000600006 PARK7Q99497 189 aaKnown RBP9.62□□□□□ -0.87
CHMP2A-205ENST00000600006 WDR18Q9BV38 432 aa9.62□□□□□ -0.87
CHMP2A-205ENST00000600006 AS3MTQ9HBK9 375 aa9.62□□□□□ -0.87
CHMP2A-205ENST00000600006 ATP8A2Q9NTI2 1148 aa9.62□□□□□ -0.87
CHMP2A-205ENST00000600006 MCM9Q9NXL9 1143 aa9.62□□□□□ -0.87
CHMP2A-205ENST00000600006 TAOK2Q9UL54 1235 aa9.62□□□□□ -0.87
CHMP2A-205ENST00000600006 GREB1LQ9C091 1923 aaPredicted RBP9.62□□□□□ -0.87
CHMP2A-205ENST00000600006 PRKAB2O43741 272 aa9.61□□□□□ -0.87
CHMP2A-205ENST00000600006 POLR3DP05423 398 aaPredicted RBP9.61□□□□□ -0.87
CHMP2A-205ENST00000600006 SHMT1P34896 483 aa9.61□□□□□ -0.87
CHMP2A-205ENST00000600006 PLCD1P51178 756 aa9.61□□□□□ -0.87
CHMP2A-205ENST00000600006 CAP1Q01518 475 aa9.61□□□□□ -0.87
CHMP2A-205ENST00000600006 EVX2Q03828 476 aa9.61□□□□□ -0.87
CHMP2A-205ENST00000600006 C17orf99Q6UX52 265 aa9.61□□□□□ -0.87
CHMP2A-205ENST00000600006 GADL1Q6ZQY3 521 aa9.61□□□□□ -0.87
CHMP2A-205ENST00000600006 PUS7LQ9H0K6 701 aaKnown RBP9.61□□□□□ -0.87
CHMP2A-205ENST00000600006 RWDD1Q9H446 243 aaPredicted RBP9.61□□□□□ -0.87
CHMP2A-205ENST00000600006 ZBTB47Q9UFB7 747 aaPredicted RBP9.61□□□□□ -0.87
CHMP2A-205ENST00000600006 STAP2Q9UGK3 403 aa9.61□□□□□ -0.87
CHMP2A-205ENST00000600006 AGTPBP1Q9UPW5 1226 aa9.61□□□□□ -0.87
CHMP2A-205ENST00000600006 HPS5Q9UPZ3 1129 aa9.61□□□□□ -0.87
CHMP2A-205ENST00000600006 TRIM17Q9Y577 477 aa9.61□□□□□ -0.87
CHMP2A-205ENST00000600006 RNF113AO15541 343 aaKnown RBP9.6□□□□□ -0.87
CHMP2A-205ENST00000600006 GH2P01242 217 aa9.6□□□□□ -0.87
CHMP2A-205ENST00000600006 CYP2C8P10632 490 aa9.6□□□□□ -0.87
CHMP2A-205ENST00000600006 CYP2D6P10635 497 aa9.6□□□□□ -0.87
CHMP2A-205ENST00000600006 BCRP11274 1271 aa9.6□□□□□ -0.87
CHMP2A-205ENST00000600006 PDE1AP54750 535 aa9.6□□□□□ -0.87
CHMP2A-205ENST00000600006 BACE1P56817 501 aa9.6□□□□□ -0.87
CHMP2A-205ENST00000600006 MTMR2Q13614 643 aa9.6□□□□□ -0.87
CHMP2A-205ENST00000600006 LRRFIP1Q32MZ4 808 aaKnown RBP9.6□□□□□ -0.87
CHMP2A-205ENST00000600006 TREML2Q5T2D2 321 aa9.6□□□□□ -0.87
CHMP2A-205ENST00000600006 OSBP2Q969R2 916 aa9.6□□□□□ -0.87
CHMP2A-205ENST00000600006 SWAP70Q9UH65 585 aa9.6□□□□□ -0.87
CHMP2A-205ENST00000600006 CCDC85CA6NKD9 419 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 C19orf81C9J6K1 198 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 GPAA1O43292 621 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 IGHDP01880 384 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 HMGCS2P54868 508 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 LACTBP83111 547 aaPredicted RBP9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 ARHGEF6Q15052 776 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 ABCB5Q2M3G0 1257 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 CERKLQ49MI3 558 aaPredicted RBP9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 C12orf60Q5U649 245 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 DDRGK1Q96HY6 314 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 STRBPQ96SI9 672 aaKnown RBP9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 FSD1Q9BTV5 496 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 LNPKQ9C0E8 428 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 EFCC1Q9HA90 598 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 ARPP21Q9UBL0 812 aaPredicted RBP9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 CPA4Q9UI42 421 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 PNMA3Q9UL41 463 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 PTPN22Q9Y2R2 807 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 SLC4A4Q9Y6R1 1079 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 ROBO3Q96MS0 1386 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 A0A0G2JMZ2 1700 aa9.59□□□□□ -0.87
CHMP2A-205ENST00000600006 PARP14Q460N5 1801 aa9.59□□□□□ -0.88
CHMP2A-205ENST00000600006 GSG1L2A8MUP6 293 aa9.58□□□□□ -0.88
CHMP2A-205ENST00000600006 USP17L10C9JJH3 530 aa9.58□□□□□ -0.88
CHMP2A-205ENST00000600006 USP17L12C9JPN9 530 aa9.58□□□□□ -0.88
CHMP2A-205ENST00000600006 USP17L21D6R901 530 aa9.58□□□□□ -0.88
CHMP2A-205ENST00000600006 M0R2C6 588 aa9.58□□□□□ -0.88
CHMP2A-205ENST00000600006 GNRH1P01148 92 aa9.58□□□□□ -0.88
CHMP2A-205ENST00000600006 GUCY1A2P33402 732 aa9.58□□□□□ -0.88
CHMP2A-205ENST00000600006 NUCB1Q02818 461 aa9.58□□□□□ -0.88
CHMP2A-205ENST00000600006 PABPC4Q13310 644 aaKnown RBP eCLIP9.58□□□□□ -0.881e-9■■■□□ 18.7
CHMP2A-205ENST00000600006 ZMYM1Q5SVZ6 1142 aa9.58□□□□□ -0.88
CHMP2A-205ENST00000600006 GIMAP6Q6P9H5 292 aa9.58□□□□□ -0.88
CHMP2A-205ENST00000600006 CHD1LQ86WJ1 897 aa9.58□□□□□ -0.88
CHMP2A-205ENST00000600006 AMOTL1Q8IY63 956 aa9.58□□□□□ -0.88
CHMP2A-205ENST00000600006 SLC44A5Q8NCS7 719 aa9.58□□□□□ -0.88
CHMP2A-205ENST00000600006 C12orf42Q96LP6 360 aa9.58□□□□□ -0.88
CHMP2A-205ENST00000600006 EPB41L4AQ9HCS5 686 aaPredicted RBP9.58□□□□□ -0.88
CHMP2A-205ENST00000600006 CYP2D7A0A087X1C5 515 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 SMIM22K7EJ46 135 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 GNAT2P19087 354 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 CTGFP29279 349 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 HOXA7P31268 230 aaPredicted RBP9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 PRMT2P55345 433 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 KIF22Q14807 665 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 SBK1Q52WX2 424 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 ERICH6BQ5W0A0 696 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 CTR9Q6PD62 1173 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 C16orf86Q6ZW13 317 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 TICAM2Q86XR7 235 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 SMCR8Q8TEV9 937 aaPredicted RBP9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 EVI5LQ96CN4 794 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 DYNLL2Q96FJ2 89 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 ARHGAP39Q9C0H5 1083 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 KIAA1683Q9H0B3 1180 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 OSBPL3Q9H4L5 887 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 CABP5Q9NP86 173 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 EMILIN3Q9NT22 766 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 TMOD4Q9NZQ9 345 aa9.57□□□□□ -0.88
CHMP2A-205ENST00000600006 PLXNB2O15031 1838 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms