RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 NBPF11Q86T75 865 aa13.21□□□□□ -0.29
SIN3B-210ENST00000599880 SMCR8Q8TEV9 937 aaPredicted RBP13.21□□□□□ -0.29
SIN3B-210ENST00000599880 ECHDC1Q9NTX5 307 aa13.21□□□□□ -0.29
SIN3B-210ENST00000599880 ZBTB21Q9ULJ3 1066 aa13.21□□□□□ -0.29
SIN3B-210ENST00000599880 PTCH2Q9Y6C5 1203 aa13.21□□□□□ -0.29
SIN3B-210ENST00000599880 C19orf81C9J6K1 198 aa13.2□□□□□ -0.3
SIN3B-210ENST00000599880 CTGFP29279 349 aa13.2□□□□□ -0.3
SIN3B-210ENST00000599880 HMGCS2P54868 508 aa13.2□□□□□ -0.3
SIN3B-210ENST00000599880 BACE1P56817 501 aa13.2□□□□□ -0.3
SIN3B-210ENST00000599880 UBE3CQ15386 1083 aa13.2□□□□□ -0.3
SIN3B-210ENST00000599880 SLC9C1Q4G0N8 1177 aa13.2□□□□□ -0.3
SIN3B-210ENST00000599880 TREML2Q5T2D2 321 aa13.2□□□□□ -0.3
SIN3B-210ENST00000599880 EDC3Q96F86 508 aaKnown RBP13.2□□□□□ -0.3
SIN3B-210ENST00000599880 GPATCH3Q96I76 525 aa13.2□□□□□ -0.3
SIN3B-210ENST00000599880 ZNF333Q96JL9 665 aa13.2□□□□□ -0.3
SIN3B-210ENST00000599880 TRIM47Q96LD4 638 aa13.2□□□□□ -0.3
SIN3B-210ENST00000599880 SRRDQ9UH36 339 aa13.2□□□□□ -0.3
SIN3B-210ENST00000599880 SMARCA5O60264 1052 aaPredicted RBP13.19□□□□□ -0.3
SIN3B-210ENST00000599880 GDF11O95390 407 aa13.19□□□□□ -0.3
SIN3B-210ENST00000599880 GCLCP48506 637 aaPredicted RBP13.19□□□□□ -0.3
SIN3B-210ENST00000599880 FCGRTP55899 365 aa13.19□□□□□ -0.3
SIN3B-210ENST00000599880 FAM110CQ1W6H9 321 aa13.19□□□□□ -0.3
SIN3B-210ENST00000599880 ZSCAN25Q6NSZ9 544 aa13.19□□□□□ -0.3
SIN3B-210ENST00000599880 LCORLQ8N3X6 602 aa13.19□□□□□ -0.3
SIN3B-210ENST00000599880 BCL11AQ9H165 835 aa13.19□□□□□ -0.3
SIN3B-210ENST00000599880 USP17L10C9JJH3 530 aa13.18□□□□□ -0.3
SIN3B-210ENST00000599880 FMNL1O95466 1100 aaPredicted RBP13.18□□□□□ -0.3
SIN3B-210ENST00000599880 OSBPP22059 807 aa13.18□□□□□ -0.3
SIN3B-210ENST00000599880 HOXA7P31268 230 aaPredicted RBP13.18□□□□□ -0.3
SIN3B-210ENST00000599880 PLCD1P51178 756 aa13.18□□□□□ -0.3
SIN3B-210ENST00000599880 JAG1P78504 1218 aa13.18□□□□□ -0.3
SIN3B-210ENST00000599880 GABPAQ06546 454 aa13.18□□□□□ -0.3
SIN3B-210ENST00000599880 MTMR2Q13614 643 aa13.18□□□□□ -0.3
SIN3B-210ENST00000599880 SLC4A8Q2Y0W8 1093 aa13.18□□□□□ -0.3
SIN3B-210ENST00000599880 DCP1AQ9NPI6 582 aaPredicted RBP13.18□□□□□ -0.3
SIN3B-210ENST00000599880 ATP8A2Q9NTI2 1148 aa13.18□□□□□ -0.3
SIN3B-210ENST00000599880 MCM9Q9NXL9 1143 aa13.18□□□□□ -0.3
SIN3B-210ENST00000599880 TMOD4Q9NZQ9 345 aa13.18□□□□□ -0.3
SIN3B-210ENST00000599880 PCDHB15Q9Y5E8 787 aa13.18□□□□□ -0.3
SIN3B-210ENST00000599880 TTC41PQ6P2S7 1318 aa13.17□□□□□ -0.3
SIN3B-210ENST00000599880 MYPNQ86TC9 1320 aa13.17□□□□□ -0.3
SIN3B-210ENST00000599880 MKI67P46013 3256 aaKnown RBP13.17□□□□□ -0.3
SIN3B-210ENST00000599880 GH2P01242 217 aa13.17□□□□□ -0.3
SIN3B-210ENST00000599880 POLR3DP05423 398 aaPredicted RBP13.17□□□□□ -0.3
SIN3B-210ENST00000599880 SHMT1P34896 483 aa13.17□□□□□ -0.3
SIN3B-210ENST00000599880 AAMPQ13685 434 aa13.17□□□□□ -0.3
SIN3B-210ENST00000599880 CERKLQ49MI3 558 aaPredicted RBP13.17□□□□□ -0.3
SIN3B-210ENST00000599880 SDR42E1Q8WUS8 393 aa13.17□□□□□ -0.3
SIN3B-210ENST00000599880 TMEM106CQ9BVX2 250 aa13.17□□□□□ -0.3
SIN3B-210ENST00000599880 ASCC2Q9H1I8 757 aaPredicted RBP13.17□□□□□ -0.3
SIN3B-210ENST00000599880 ARMT1Q9H993 441 aa13.17□□□□□ -0.3
SIN3B-210ENST00000599880 PLXNB2O15031 1838 aa13.16□□□□□ -0.3
SIN3B-210ENST00000599880 GREB1LQ9C091 1923 aaPredicted RBP13.16□□□□□ -0.3
SIN3B-210ENST00000599880 MBD4O95243 580 aa13.16□□□□□ -0.3
SIN3B-210ENST00000599880 USP14P54578 494 aa13.16□□□□□ -0.3
SIN3B-210ENST00000599880 ABCB5Q2M3G0 1257 aa13.16□□□□□ -0.3
SIN3B-210ENST00000599880 SHROOM1Q2M3G4 852 aaPredicted RBP13.16□□□□□ -0.3
SIN3B-210ENST00000599880 ANKRD13CQ8N6S4 541 aa13.16□□□□□ -0.3
SIN3B-210ENST00000599880 KBTBD3Q8NAB2 608 aa13.16□□□□□ -0.3
SIN3B-210ENST00000599880 RAET1EQ8TD07 263 aa13.16□□□□□ -0.3
SIN3B-210ENST00000599880 C12orf42Q96LP6 360 aa13.16□□□□□ -0.3
SIN3B-210ENST00000599880 CABP5Q9NP86 173 aa13.16□□□□□ -0.3
SIN3B-210ENST00000599880 SWAP70Q9UH65 585 aa13.16□□□□□ -0.3
SIN3B-210ENST00000599880 PARP14Q460N5 1801 aa13.16□□□□□ -0.3
SIN3B-210ENST00000599880 POTEFA5A3E0 1075 aa13.15□□□□□ -0.3
SIN3B-210ENST00000599880 TNPO2O14787 897 aaKnown RBP13.15□□□□□ -0.3
SIN3B-210ENST00000599880 ERC2O15083 957 aa13.15□□□□□ -0.3
SIN3B-210ENST00000599880 GRK4P32298 578 aa13.15□□□□□ -0.3
SIN3B-210ENST00000599880 IRX3P78415 501 aaPredicted RBP13.15□□□□□ -0.3
SIN3B-210ENST00000599880 PRKCZQ05513 592 aa13.15□□□□□ -0.3
SIN3B-210ENST00000599880 USP17L2Q6R6M4 530 aa13.15□□□□□ -0.3
SIN3B-210ENST00000599880 AMOTL1Q8IY63 956 aa13.15□□□□□ -0.3
SIN3B-210ENST00000599880 SH3TC2Q8TF17 1288 aa13.15□□□□□ -0.3
SIN3B-210ENST00000599880 GTF3C2Q8WUA4 911 aaPredicted RBP13.15□□□□□ -0.3
SIN3B-210ENST00000599880 DDRGK1Q96HY6 314 aa13.15□□□□□ -0.3
SIN3B-210ENST00000599880 YTHDC1Q96MU7 727 aaKnown RBP13.15□□□□□ -0.3
SIN3B-210ENST00000599880 KIAA1683Q9H0B3 1180 aa13.15□□□□□ -0.3
SIN3B-210ENST00000599880 MORF4L1Q9UBU8 362 aa13.15□□□□□ -0.3
SIN3B-210ENST00000599880 A0A0G2JMZ2 1700 aa13.14□□□□□ -0.31
SIN3B-210ENST00000599880 ZFYP08048 801 aaPredicted RBP13.14□□□□□ -0.31
SIN3B-210ENST00000599880 IRF5Q13568 498 aa13.14□□□□□ -0.31
SIN3B-210ENST00000599880 RAB3GAP1Q15042 981 aa13.14□□□□□ -0.31
SIN3B-210ENST00000599880 LRRFIP1Q32MZ4 808 aaKnown RBP13.14□□□□□ -0.31
SIN3B-210ENST00000599880 SLFNL1Q499Z3 407 aa13.14□□□□□ -0.31
SIN3B-210ENST00000599880 SLAIN1Q8ND83 568 aa13.14□□□□□ -0.31
SIN3B-210ENST00000599880 CRBNQ96SW2 442 aa13.14□□□□□ -0.31
SIN3B-210ENST00000599880 PUS7LQ9H0K6 701 aaKnown RBP13.14□□□□□ -0.31
SIN3B-210ENST00000599880 EMILIN3Q9NT22 766 aa13.14□□□□□ -0.31
SIN3B-210ENST00000599880 RLFQ13129 1914 aa13.13□□□□□ -0.31
SIN3B-210ENST00000599880 PRKAB2O43741 272 aa13.13□□□□□ -0.31
SIN3B-210ENST00000599880 GLRX3O76003 335 aaKnown RBP13.13□□□□□ -0.31
SIN3B-210ENST00000599880 ECM2O94769 699 aaPredicted RBP13.13□□□□□ -0.31
SIN3B-210ENST00000599880 GUCY1A2P33402 732 aa13.13□□□□□ -0.31
SIN3B-210ENST00000599880 HERVK_113P62684 666 aa13.13□□□□□ -0.31
SIN3B-210ENST00000599880 HDAC1Q13547 482 aaPredicted RBP13.13□□□□□ -0.31
SIN3B-210ENST00000599880 C12orf60Q5U649 245 aa13.13□□□□□ -0.31
SIN3B-210ENST00000599880 GIMAP6Q6P9H5 292 aa13.13□□□□□ -0.31
SIN3B-210ENST00000599880 PI4K2BQ8TCG2 481 aa13.13□□□□□ -0.31
SIN3B-210ENST00000599880 PXYLP1Q8TE99 480 aa13.13□□□□□ -0.31
SIN3B-210ENST00000599880 APPBP2Q92624 585 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms