RNA–Protein interactions for RNA: ENST00000599569.2

SSR4P1-203, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 2,260 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-203ENST00000599569 CUTAO60888 179 aa18.26■□□□□ 0.51
SSR4P1-203ENST00000599569 PCP11498 1178 aaKnown RBP18.26■□□□□ 0.51
SSR4P1-203ENST00000599569 NLRP12P59046 1061 aa18.26■□□□□ 0.51
SSR4P1-203ENST00000599569 LRMPQ12912 555 aa18.26■□□□□ 0.51
SSR4P1-203ENST00000599569 SLC15A2Q16348 729 aa18.26■□□□□ 0.51
SSR4P1-203ENST00000599569 RESP18Q5W5W9 173 aa18.26■□□□□ 0.51
SSR4P1-203ENST00000599569 CMTR1Q8N1G2 835 aaKnown RBP18.26■□□□□ 0.51
SSR4P1-203ENST00000599569 PRIMPOLQ96LW4 560 aa18.26■□□□□ 0.51
SSR4P1-203ENST00000599569 KCNJ14Q9UNX9 436 aa18.26■□□□□ 0.51
SSR4P1-203ENST00000599569 FGRP09769 529 aa18.25■□□□□ 0.51
SSR4P1-203ENST00000599569 CCDC144BQ3MJ40 725 aa18.25■□□□□ 0.51
SSR4P1-203ENST00000599569 ZSCAN10Q96SZ4 725 aaPredicted RBP18.25■□□□□ 0.51
SSR4P1-203ENST00000599569 CTR9Q6PD62 1173 aa18.25■□□□□ 0.51
SSR4P1-203ENST00000599569 ENAHQ8N8S7 591 aaPredicted RBP18.25■□□□□ 0.51
SSR4P1-203ENST00000599569 CLIC6Q96NY7 704 aa18.25■□□□□ 0.51
SSR4P1-203ENST00000599569 CYP2D7A0A087X1C5 515 aa18.24■□□□□ 0.51
SSR4P1-203ENST00000599569 TOB1P50616 345 aaPredicted RBP18.24■□□□□ 0.51
SSR4P1-203ENST00000599569 MECOMQ03112 1051 aa18.24■□□□□ 0.51
SSR4P1-203ENST00000599569 RILPL1Q5EBL4 403 aa18.24■□□□□ 0.51
SSR4P1-203ENST00000599569 CACTINQ8WUQ7 758 aaKnown RBP18.24■□□□□ 0.51
SSR4P1-203ENST00000599569 RNF26Q9BY78 433 aaPredicted RBP18.24■□□□□ 0.51
SSR4P1-203ENST00000599569 STK32BQ9NY57 414 aa18.24■□□□□ 0.51
SSR4P1-203ENST00000599569 BAZ2AQ9UIF9 1905 aaKnown RBP18.24■□□□□ 0.51
SSR4P1-203ENST00000599569 MYH2Q9UKX2 1941 aa18.24■□□□□ 0.51
SSR4P1-203ENST00000599569 BIN1O00499 593 aa18.24■□□□□ 0.51
SSR4P1-203ENST00000599569 TM4SF1P30408 202 aa18.24■□□□□ 0.51
SSR4P1-203ENST00000599569 IQCA1Q86XH1 822 aa18.24■□□□□ 0.51
SSR4P1-203ENST00000599569 KRI1Q8N9T8 703 aaKnown RBP18.24■□□□□ 0.51
SSR4P1-203ENST00000599569 TUBE1Q9UJT0 475 aa18.24■□□□□ 0.51
SSR4P1-203ENST00000599569 USP17L12C9JPN9 530 aa18.23■□□□□ 0.51
SSR4P1-203ENST00000599569 USP17L21D6R901 530 aa18.23■□□□□ 0.51
SSR4P1-203ENST00000599569 IFIT1BQ5T764 474 aaKnown RBP18.23■□□□□ 0.51
SSR4P1-203ENST00000599569 FLAD1Q8NFF5 587 aa18.23■□□□□ 0.51
SSR4P1-203ENST00000599569 DUOX1Q9NRD9 1551 aa18.23■□□□□ 0.51
SSR4P1-203ENST00000599569 DYNC1I1O14576 645 aa18.23■□□□□ 0.51
SSR4P1-203ENST00000599569 DDR1Q08345 913 aa18.23■□□□□ 0.51
SSR4P1-203ENST00000599569 MYRIPQ8NFW9 859 aa18.23■□□□□ 0.51
SSR4P1-203ENST00000599569 NPHP1O15259 732 aa18.22■□□□□ 0.51
SSR4P1-203ENST00000599569 PRDM1O75626 825 aa18.22■□□□□ 0.51
SSR4P1-203ENST00000599569 MSL1Q68DK7 614 aa18.22■□□□□ 0.51
SSR4P1-203ENST00000599569 CATIPQ7Z7H3 387 aa18.22■□□□□ 0.51
SSR4P1-203ENST00000599569 CCDC125Q86Z20 511 aa18.22■□□□□ 0.51
SSR4P1-203ENST00000599569 LRRC8AQ8IWT6 810 aa18.22■□□□□ 0.51
SSR4P1-203ENST00000599569 AATFQ9NY61 560 aaKnown RBP eCLIP18.22■□□□□ 0.51
SSR4P1-203ENST00000599569 PRDX5P30044 214 aa18.21■□□□□ 0.51
SSR4P1-203ENST00000599569 AKAP17AQ02040 695 aaKnown RBP18.21■□□□□ 0.51
SSR4P1-203ENST00000599569 NR5A1Q13285 461 aa18.21■□□□□ 0.51
SSR4P1-203ENST00000599569 TMED8Q6PL24 325 aaPredicted RBP18.21■□□□□ 0.51
SSR4P1-203ENST00000599569 CRNKL1Q9BZJ0 848 aaKnown RBP18.21■□□□□ 0.51
SSR4P1-203ENST00000599569 PDGFDQ9GZP0 370 aaPredicted RBP18.21■□□□□ 0.51
SSR4P1-203ENST00000599569 DCP1AQ9NPI6 582 aaPredicted RBP18.21■□□□□ 0.51
SSR4P1-203ENST00000599569 ATP8A2Q9NTI2 1148 aa18.21■□□□□ 0.51
SSR4P1-203ENST00000599569 KCNH3Q9ULD8 1083 aa18.21■□□□□ 0.51
SSR4P1-203ENST00000599569 ZBTB22O15209 634 aa18.21■□□□□ 0.51
SSR4P1-203ENST00000599569 RRP9O43818 475 aaKnown RBP18.21■□□□□ 0.51
SSR4P1-203ENST00000599569 NEMFO60524 1076 aa18.21■□□□□ 0.51
SSR4P1-203ENST00000599569 CHAF1AQ13111 956 aaPredicted RBP18.21■□□□□ 0.51
SSR4P1-203ENST00000599569 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.21■□□□□ 0.51
SSR4P1-203ENST00000599569 SMTNL1A8MU46 457 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 SERPINB2P05120 415 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 XBP1P17861 261 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 PTPREP23469 700 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 FUT2Q10981 343 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 TROAPQ12815 778 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 PKN1Q16512 942 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 LONRF3Q496Y0 759 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 KRBA2Q6ZNG9 492 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 TXNRD3Q86VQ6 643 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 CNBD1Q8NA66 436 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 RBM28Q9NW13 759 aaKnown RBP18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 MYH13Q9UKX3 1938 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 POLRMTO00411 1230 aaKnown RBP18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 PRPF3O43395 683 aaKnown RBP18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 ORC4O43929 436 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 CALM1P0DP23 149 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 CALM2P0DP24 149 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 CALM3P0DP25 149 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 TPM4P67936 248 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 NCAPHQ15003 741 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 PRR5LQ6MZQ0 368 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 ELOA2Q8IYF1 753 aaPredicted RBP18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 OXER1Q8TDS5 423 aa18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 FBXO2Q9UK22 296 aaPredicted RBP18.2■□□□□ 0.5
SSR4P1-203ENST00000599569 IKBKBO14920 756 aa18.19■□□□□ 0.5
SSR4P1-203ENST00000599569 PNOCQ13519 176 aa18.19■□□□□ 0.5
SSR4P1-203ENST00000599569 HSP90AA2PQ14568 343 aaPredicted RBP18.19■□□□□ 0.5
SSR4P1-203ENST00000599569 NLGN1Q8N2Q7 840 aa18.19■□□□□ 0.5
SSR4P1-203ENST00000599569 CNNM3Q8NE01 707 aa18.19■□□□□ 0.5
SSR4P1-203ENST00000599569 PCDHB6Q9Y5E3 794 aa18.19■□□□□ 0.5
SSR4P1-203ENST00000599569 IRS2Q9Y4H2 1338 aa18.19■□□□□ 0.5
SSR4P1-203ENST00000599569 MYH6P13533 1939 aa18.19■□□□□ 0.5
SSR4P1-203ENST00000599569 ISM2Q6H9L7 571 aa18.19■□□□□ 0.5
SSR4P1-203ENST00000599569 FILIP1Q7Z7B0 1213 aa18.19■□□□□ 0.5
SSR4P1-203ENST00000599569 METTL16Q86W50 562 aaKnown RBP18.19■□□□□ 0.5
SSR4P1-203ENST00000599569 CEP131Q9UPN4 1083 aa18.19■□□□□ 0.5
SSR4P1-203ENST00000599569 DDAH1O94760 285 aa18.18■□□□□ 0.5
SSR4P1-203ENST00000599569 SBK1Q52WX2 424 aa18.18■□□□□ 0.5
SSR4P1-203ENST00000599569 ZNF579Q8NAF0 562 aaKnown RBP18.18■□□□□ 0.5
SSR4P1-203ENST00000599569 SHISA4Q96DD7 197 aa18.18■□□□□ 0.5
SSR4P1-203ENST00000599569 CABP5Q9NP86 173 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms