RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 ZBTB21Q9ULJ3 1066 aa27.84■■■□□ 2.05
CCDC61-207ENST00000599044 RAB11FIP3O75154 756 aa27.83■■■□□ 2.05
CCDC61-207ENST00000599044 HLA-DOAP06340 250 aa27.83■■■□□ 2.05
CCDC61-207ENST00000599044 PDE6AP16499 860 aa27.83■■■□□ 2.05
CCDC61-207ENST00000599044 BACE1P56817 501 aa27.83■■■□□ 2.05
CCDC61-207ENST00000599044 SLC9C2Q5TAH2 1124 aa27.83■■■□□ 2.05
CCDC61-207ENST00000599044 PNMA3Q9UL41 463 aa27.83■■■□□ 2.05
CCDC61-207ENST00000599044 FLT3LGP49771 235 aa27.82■■■□□ 2.04
CCDC61-207ENST00000599044 EVX2Q03828 476 aa27.82■■■□□ 2.04
CCDC61-207ENST00000599044 SLFNL1Q499Z3 407 aa27.82■■■□□ 2.04
CCDC61-207ENST00000599044 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.82■■■□□ 2.04
CCDC61-207ENST00000599044 PCDH10Q9P2E7 1040 aa27.82■■■□□ 2.04
CCDC61-207ENST00000599044 TCRBV5S4A2TA0A5A2 114 aa27.81■■■□□ 2.04
CCDC61-207ENST00000599044 TNPO2O14787 897 aaKnown RBP27.81■■■□□ 2.04
CCDC61-207ENST00000599044 PEX10O60683 326 aa27.81■■■□□ 2.04
CCDC61-207ENST00000599044 PLCD1P51178 756 aa27.81■■■□□ 2.04
CCDC61-207ENST00000599044 PDE3AQ14432 1141 aa27.81■■■□□ 2.04
CCDC61-207ENST00000599044 TTF1Q15361 905 aaPredicted RBP27.81■■■□□ 2.04
CCDC61-207ENST00000599044 TATDN1Q6P1N9 297 aa27.81■■■□□ 2.04
CCDC61-207ENST00000599044 CERS3Q8IU89 383 aa27.81■■■□□ 2.04
CCDC61-207ENST00000599044 ZNF532Q9HCE3 1301 aa27.81■■■□□ 2.04
CCDC61-207ENST00000599044 MAGEB6P1A0A0J9YX57 407 aa27.8■■■□□ 2.04
CCDC61-207ENST00000599044 GH2P01242 217 aa27.8■■■□□ 2.04
CCDC61-207ENST00000599044 SHISA4Q96DD7 197 aa27.8■■■□□ 2.04
CCDC61-207ENST00000599044 BOLA2Q9H3K6 86 aa27.8■■■□□ 2.04
CCDC61-207ENST00000599044 DOCK3Q8IZD9 2030 aa27.8■■■□□ 2.04
CCDC61-207ENST00000599044 CCL5P13501 91 aa27.79■■■□□ 2.04
CCDC61-207ENST00000599044 ELNP15502 786 aa27.79■■■□□ 2.04
CCDC61-207ENST00000599044 FAM110CQ1W6H9 321 aa27.79■■■□□ 2.04
CCDC61-207ENST00000599044 TMED8Q6PL24 325 aaPredicted RBP27.79■■■□□ 2.04
CCDC61-207ENST00000599044 GCC1Q96CN9 775 aa27.79■■■□□ 2.04
CCDC61-207ENST00000599044 P2RX7Q99572 595 aaKnown RBP27.79■■■□□ 2.04
CCDC61-207ENST00000599044 CHMP4BQ9H444 224 aaKnown RBP27.79■■■□□ 2.04
CCDC61-207ENST00000599044 BIN2Q9UBW5 565 aaPredicted RBP27.79■■■□□ 2.04
CCDC61-207ENST00000599044 SERPINB13Q9UIV8 391 aa27.79■■■□□ 2.04
CCDC61-207ENST00000599044 USP17L10C9JJH3 530 aa27.78■■■□□ 2.04
CCDC61-207ENST00000599044 SMARCA5O60264 1052 aaPredicted RBP27.78■■■□□ 2.04
CCDC61-207ENST00000599044 ADCY3O60266 1144 aa27.78■■■□□ 2.04
CCDC61-207ENST00000599044 CHGBP05060 677 aa27.78■■■□□ 2.04
CCDC61-207ENST00000599044 PABPC4Q13310 644 aaKnown RBP eCLIP27.78■■■□□ 2.04
CCDC61-207ENST00000599044 EHD4Q9H223 541 aa27.78■■■□□ 2.04
CCDC61-207ENST00000599044 EMILIN3Q9NT22 766 aa27.78■■■□□ 2.04
CCDC61-207ENST00000599044 GINM1Q9NU53 330 aa27.78■■■□□ 2.04
CCDC61-207ENST00000599044 TMOD4Q9NZQ9 345 aa27.78■■■□□ 2.04
CCDC61-207ENST00000599044 MYH1P12882 1939 aa27.78■■■□□ 2.04
CCDC61-207ENST00000599044 GCLCP48506 637 aaPredicted RBP27.77■■■□□ 2.04
CCDC61-207ENST00000599044 LCORLQ8N3X6 602 aa27.77■■■□□ 2.04
CCDC61-207ENST00000599044 SLAIN1Q8ND83 568 aa27.77■■■□□ 2.04
CCDC61-207ENST00000599044 C19orf81C9J6K1 198 aa27.76■■■□□ 2.03
CCDC61-207ENST00000599044 ATP5JP18859 108 aa27.76■■■□□ 2.03
CCDC61-207ENST00000599044 HOXA7P31268 230 aaPredicted RBP27.76■■■□□ 2.03
CCDC61-207ENST00000599044 SHMT1P34896 483 aa27.76■■■□□ 2.03
CCDC61-207ENST00000599044 POTEEQ6S8J3 1075 aa27.76■■■□□ 2.03
CCDC61-207ENST00000599044 TTC6Q86TZ1 520 aa27.76■■■□□ 2.03
CCDC61-207ENST00000599044 UNC93B1Q9H1C4 597 aa27.76■■■□□ 2.03
CCDC61-207ENST00000599044 PAG1Q9NWQ8 432 aa27.76■■■□□ 2.03
CCDC61-207ENST00000599044 IRF5Q13568 498 aa27.75■■■□□ 2.03
CCDC61-207ENST00000599044 SDR42E1Q8WUS8 393 aa27.75■■■□□ 2.03
CCDC61-207ENST00000599044 RNF208Q9H0X6 261 aa27.75■■■□□ 2.03
CCDC61-207ENST00000599044 TXNRD2Q9NNW7 524 aa27.75■■■□□ 2.03
CCDC61-207ENST00000599044 IRX3P78415 501 aaPredicted RBP27.74■■■□□ 2.03
CCDC61-207ENST00000599044 CERKLQ49MI3 558 aaPredicted RBP27.74■■■□□ 2.03
CCDC61-207ENST00000599044 COA7Q96BR5 231 aa27.74■■■□□ 2.03
CCDC61-207ENST00000599044 HAUS7Q99871 368 aa27.74■■■□□ 2.03
CCDC61-207ENST00000599044 CRNKL1Q9BZJ0 848 aaKnown RBP27.74■■■□□ 2.03
CCDC61-207ENST00000599044 ARMT1Q9H993 441 aa27.74■■■□□ 2.03
CCDC61-207ENST00000599044 MORF4L1Q9UBU8 362 aa27.74■■■□□ 2.03
CCDC61-207ENST00000599044 TAOK2Q9UL54 1235 aa27.74■■■□□ 2.03
CCDC61-207ENST00000599044 DDX60LQ5H9U9 1706 aaKnown RBP27.74■■■□□ 2.03
CCDC61-207ENST00000599044 INHAP05111 366 aa27.73■■■□□ 2.03
CCDC61-207ENST00000599044 POLR3DP05423 398 aaPredicted RBP27.73■■■□□ 2.03
CCDC61-207ENST00000599044 GJB1P08034 283 aa27.73■■■□□ 2.03
CCDC61-207ENST00000599044 CYP2D6P10635 497 aa27.73■■■□□ 2.03
CCDC61-207ENST00000599044 GJA8P48165 433 aa27.73■■■□□ 2.03
CCDC61-207ENST00000599044 UBXN2AP68543 259 aa27.73■■■□□ 2.03
CCDC61-207ENST00000599044 GABPAQ06546 454 aa27.73■■■□□ 2.03
CCDC61-207ENST00000599044 ZYXQ15942 572 aaKnown RBP27.73■■■□□ 2.03
CCDC61-207ENST00000599044 ACER1Q8TDN7 264 aa27.73■■■□□ 2.03
CCDC61-207ENST00000599044 PXYLP1Q8TE99 480 aa27.73■■■□□ 2.03
CCDC61-207ENST00000599044 LRRCC1Q9C099 1032 aa27.73■■■□□ 2.03
CCDC61-207ENST00000599044 MCM9Q9NXL9 1143 aa27.73■■■□□ 2.03
CCDC61-207ENST00000599044 GJD2Q9UKL4 321 aa27.73■■■□□ 2.03
CCDC61-207ENST00000599044 PRKAB2O43741 272 aa27.72■■■□□ 2.03
CCDC61-207ENST00000599044 GUCY1A2P33402 732 aa27.72■■■□□ 2.03
CCDC61-207ENST00000599044 ADD2P35612 726 aa27.72■■■□□ 2.03
CCDC61-207ENST00000599044 HERVK_113P62684 666 aa27.72■■■□□ 2.03
CCDC61-207ENST00000599044 RAB3GAP1Q15042 981 aa27.72■■■□□ 2.03
CCDC61-207ENST00000599044 ABCB5Q2M3G0 1257 aa27.72■■■□□ 2.03
CCDC61-207ENST00000599044 DCP1AQ9NPI6 582 aaPredicted RBP27.72■■■□□ 2.03
CCDC61-207ENST00000599044 RBPJLQ9UBG7 517 aa27.72■■■□□ 2.03
CCDC61-207ENST00000599044 USP17L2Q6R6M4 530 aa27.71■■■□□ 2.03
CCDC61-207ENST00000599044 TRIOBPQ9H2D6 2365 aa27.71■■■□□ 2.03
CCDC61-207ENST00000599044 SMIM22K7EJ46 135 aa27.7■■■□□ 2.02
CCDC61-207ENST00000599044 Q3C1V9 767 aa27.7■■■□□ 2.02
CCDC61-207ENST00000599044 MBD4O95243 580 aa27.69■■■□□ 2.02
CCDC61-207ENST00000599044 HABP4Q5JVS0 413 aaKnown RBP27.69■■■□□ 2.02
CCDC61-207ENST00000599044 UBE2Q1Q7Z7E8 422 aa27.69■■■□□ 2.02
CCDC61-207ENST00000599044 U2AF1L4Q8WU68 220 aaKnown RBP27.69■■■□□ 2.02
CCDC61-207ENST00000599044 NAV1Q8NEY1 1877 aa27.68■■■□□ 2.02
CCDC61-207ENST00000599044 SLC44A5Q8NCS7 719 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms