RNA–Protein interactions for RNA: ENST00000599019.5

PRKD2-212, Transcript of protein kinase D2, humanhuman

TSL 5

Gene PRKD2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-212ENST00000599019 TUBE1Q9UJT0 475 aa24.5■■□□□ 1.51
PRKD2-212ENST00000599019 GNPATO15228 680 aa24.49■■□□□ 1.51
PRKD2-212ENST00000599019 MYO1BO43795 1136 aa24.49■■□□□ 1.51
PRKD2-212ENST00000599019 DDAH1O94760 285 aa24.49■■□□□ 1.51
PRKD2-212ENST00000599019 PDGFDQ9GZP0 370 aaPredicted RBP24.49■■□□□ 1.51
PRKD2-212ENST00000599019 UQCRHLA0A096LP55 91 aa24.49■■□□□ 1.51
PRKD2-212ENST00000599019 UQCRHP07919 91 aa24.49■■□□□ 1.51
PRKD2-212ENST00000599019 MARCKSP29966 332 aaPredicted RBP24.49■■□□□ 1.51
PRKD2-212ENST00000599019 ZNF579Q8NAF0 562 aaKnown RBP24.49■■□□□ 1.51
PRKD2-212ENST00000599019 ZKSCAN3Q9BRR0 538 aa24.49■■□□□ 1.51
PRKD2-212ENST00000599019 ARPP21Q9UBL0 812 aaPredicted RBP24.49■■□□□ 1.51
PRKD2-212ENST00000599019 PYCARDQ9ULZ3 195 aa24.49■■□□□ 1.51
PRKD2-212ENST00000599019 DLEC1Q9Y238 1755 aa24.49■■□□□ 1.51
PRKD2-212ENST00000599019 MROH7-TTC4A0A0A0MT08 1334 aa24.48■■□□□ 1.51
PRKD2-212ENST00000599019 IKBKBO14920 756 aa24.48■■□□□ 1.51
PRKD2-212ENST00000599019 RRP9O43818 475 aaKnown RBP24.48■■□□□ 1.51
PRKD2-212ENST00000599019 SBK1Q52WX2 424 aa24.48■■□□□ 1.51
PRKD2-212ENST00000599019 SHC4Q6S5L8 630 aa24.48■■□□□ 1.51
PRKD2-212ENST00000599019 AOPEPQ8N6M6 819 aa24.48■■□□□ 1.51
PRKD2-212ENST00000599019 IMPACTQ9P2X3 320 aa24.48■■□□□ 1.51
PRKD2-212ENST00000599019 KIAA1551Q9HCM1 1747 aa24.47■■□□□ 1.51
PRKD2-212ENST00000599019 MYH13Q9UKX3 1938 aa24.47■■□□□ 1.51
PRKD2-212ENST00000599019 PRPF3O43395 683 aaKnown RBP24.47■■□□□ 1.51
PRKD2-212ENST00000599019 CHAF1AQ13111 956 aaPredicted RBP24.47■■□□□ 1.51
PRKD2-212ENST00000599019 IFIT1BQ5T764 474 aaKnown RBP24.47■■□□□ 1.51
PRKD2-212ENST00000599019 NUP133Q8WUM0 1156 aa24.47■■□□□ 1.51
PRKD2-212ENST00000599019 FAM13BQ9NYF5 915 aa24.47■■□□□ 1.51
PRKD2-212ENST00000599019 GSDMDP57764 484 aa24.47■■□□□ 1.51
PRKD2-212ENST00000599019 MECOMQ03112 1051 aa24.47■■□□□ 1.51
PRKD2-212ENST00000599019 CTR9Q6PD62 1173 aa24.47■■□□□ 1.51
PRKD2-212ENST00000599019 ENAHQ8N8S7 591 aaPredicted RBP24.47■■□□□ 1.51
PRKD2-212ENST00000599019 MYRIPQ8NFW9 859 aa24.47■■□□□ 1.51
PRKD2-212ENST00000599019 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.47■■□□□ 1.51
PRKD2-212ENST00000599019 LEMD3Q9Y2U8 911 aa24.47■■□□□ 1.51
PRKD2-212ENST00000599019 BMP15O95972 392 aa24.46■■□□□ 1.51
PRKD2-212ENST00000599019 DYNLL1P63167 89 aaKnown RBP24.46■■□□□ 1.51
PRKD2-212ENST00000599019 SRP68Q9UHB9 627 aaKnown RBP24.46■■□□□ 1.51
PRKD2-212ENST00000599019 BTBD18B2RXH4 712 aa24.45■■□□□ 1.5
PRKD2-212ENST00000599019 LAMB1P07942 1786 aa24.45■■□□□ 1.5
PRKD2-212ENST00000599019 PTPREP23469 700 aa24.44■■□□□ 1.5
PRKD2-212ENST00000599019 GUCY1A2P33402 732 aa24.44■■□□□ 1.5
PRKD2-212ENST00000599019 DPCR1Q3MIW9 517 aa24.44■■□□□ 1.5
PRKD2-212ENST00000599019 ZNF384Q8TF68 577 aa24.44■■□□□ 1.5
PRKD2-212ENST00000599019 ARHGEF1Q92888 912 aaKnown RBP24.44■■□□□ 1.5
PRKD2-212ENST00000599019 MAP7D2Q96T17 732 aa24.44■■□□□ 1.5
PRKD2-212ENST00000599019 KCNH3Q9ULD8 1083 aa24.44■■□□□ 1.5
PRKD2-212ENST00000599019 TAF1LQ8IZX4 1826 aa24.44■■□□□ 1.5
PRKD2-212ENST00000599019 ADRA2BP18089 450 aa24.44■■□□□ 1.5
PRKD2-212ENST00000599019 TM4SF1P30408 202 aa24.44■■□□□ 1.5
PRKD2-212ENST00000599019 KANK3Q6NY19 840 aa24.44■■□□□ 1.5
PRKD2-212ENST00000599019 KRBA2Q6ZNG9 492 aa24.44■■□□□ 1.5
PRKD2-212ENST00000599019 CERS3Q8IU89 383 aa24.44■■□□□ 1.5
PRKD2-212ENST00000599019 WDR66Q8TBY9 1149 aa24.44■■□□□ 1.5
PRKD2-212ENST00000599019 CCDC34Q96HJ3 373 aa24.44■■□□□ 1.5
PRKD2-212ENST00000599019 BRMS1Q9HCU9 246 aa24.44■■□□□ 1.5
PRKD2-212ENST00000599019 TAF1P21675 1872 aa24.43■■□□□ 1.5
PRKD2-212ENST00000599019 IRS2Q9Y4H2 1338 aa24.43■■□□□ 1.5
PRKD2-212ENST00000599019 GTF2F1P35269 517 aaKnown RBP eCLIP24.43■■□□□ 1.51e-7■■■■■ 30.9
PRKD2-212ENST00000599019 PDE4BQ07343 736 aa24.43■■□□□ 1.5
PRKD2-212ENST00000599019 C15orf52Q6ZUT6 534 aaKnown RBP24.43■■□□□ 1.5
PRKD2-212ENST00000599019 MTERF4Q7Z6M4 381 aaKnown RBP24.43■■□□□ 1.5
PRKD2-212ENST00000599019 CCDC88AQ3V6T2 1871 aa24.43■■□□□ 1.5
PRKD2-212ENST00000599019 USP17L12C9JPN9 530 aa24.42■■□□□ 1.5
PRKD2-212ENST00000599019 USP17L21D6R901 530 aa24.42■■□□□ 1.5
PRKD2-212ENST00000599019 HMGB2P26583 209 aaKnown RBP24.42■■□□□ 1.5
PRKD2-212ENST00000599019 CCDC178Q5BJE1 867 aa24.42■■□□□ 1.5
PRKD2-212ENST00000599019 TRAPPC3LQ5T215 181 aa24.42■■□□□ 1.5
PRKD2-212ENST00000599019 LRRC8AQ8IWT6 810 aa24.42■■□□□ 1.5
PRKD2-212ENST00000599019 CNNM3Q8NE01 707 aa24.42■■□□□ 1.5
PRKD2-212ENST00000599019 SPON1Q9HCB6 807 aa24.42■■□□□ 1.5
PRKD2-212ENST00000599019 DCP1AQ9NPI6 582 aaPredicted RBP24.42■■□□□ 1.5
PRKD2-212ENST00000599019 NRBP1Q9UHY1 535 aa24.42■■□□□ 1.5
PRKD2-212ENST00000599019 QSER1Q2KHR3 1735 aa24.41■■□□□ 1.5
PRKD2-212ENST00000599019 RFC4P35249 363 aa24.41■■□□□ 1.5
PRKD2-212ENST00000599019 TOB1P50616 345 aaPredicted RBP24.41■■□□□ 1.5
PRKD2-212ENST00000599019 GSTO1P78417 241 aa24.41■■□□□ 1.5
PRKD2-212ENST00000599019 FUT2Q10981 343 aa24.41■■□□□ 1.5
PRKD2-212ENST00000599019 GRAPQ13588 217 aa24.41■■□□□ 1.5
PRKD2-212ENST00000599019 GRAPLQ8TC17 118 aaPredicted RBP24.41■■□□□ 1.5
PRKD2-212ENST00000599019 OSBPL5Q9H0X9 879 aaPredicted RBP24.41■■□□□ 1.5
PRKD2-212ENST00000599019 FBXO2Q9UK22 296 aaPredicted RBP24.41■■□□□ 1.5
PRKD2-212ENST00000599019 KCNJ14Q9UNX9 436 aa24.41■■□□□ 1.5
PRKD2-212ENST00000599019 SRPRBQ9Y5M8 271 aaKnown RBP24.41■■□□□ 1.5
PRKD2-212ENST00000599019 KRT2P35908 639 aa24.41■■□□□ 1.5
PRKD2-212ENST00000599019 TROAPQ12815 778 aa24.41■■□□□ 1.5
PRKD2-212ENST00000599019 OLFM4Q6UX06 510 aa24.41■■□□□ 1.5
PRKD2-212ENST00000599019 CACTINQ8WUQ7 758 aaKnown RBP24.41■■□□□ 1.5
PRKD2-212ENST00000599019 PHF20Q9BVI0 1012 aa24.41■■□□□ 1.5
PRKD2-212ENST00000599019 TFCP2L1Q9NZI6 479 aa24.41■■□□□ 1.5
PRKD2-212ENST00000599019 TMTC3Q6ZXV5 915 aa24.4■■□□□ 1.5
PRKD2-212ENST00000599019 STK11IPQ8N1F8 1099 aa24.4■■□□□ 1.5
PRKD2-212ENST00000599019 CTCFLQ8NI51 663 aaPredicted RBP24.4■■□□□ 1.5
PRKD2-212ENST00000599019 WTIPA6NIX2 430 aaPredicted RBP24.39■■□□□ 1.5
PRKD2-212ENST00000599019 NPHP1O15259 732 aa24.39■■□□□ 1.5
PRKD2-212ENST00000599019 CCDC144BQ3MJ40 725 aa24.39■■□□□ 1.5
PRKD2-212ENST00000599019 DZIP1Q86YF9 867 aaKnown RBP24.39■■□□□ 1.5
PRKD2-212ENST00000599019 C17orf53Q8N3J3 647 aaPredicted RBP24.39■■□□□ 1.5
PRKD2-212ENST00000599019 ERCC4Q92889 916 aaPredicted RBP24.39■■□□□ 1.5
PRKD2-212ENST00000599019 KCND1Q9NSA2 647 aa24.39■■□□□ 1.5
PRKD2-212ENST00000599019 DACH1Q9UI36 760 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms