RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 SLC4A8Q2Y0W8 1093 aa27.86■■■□□ 2.05
SSBP4-205ENST00000598159 EDC3Q96F86 508 aaKnown RBP27.86■■■□□ 2.05
SSBP4-205ENST00000598159 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.86■■■□□ 2.055e-8■■■■■ 29.8
SSBP4-205ENST00000598159 POTEFA5A3E0 1075 aa27.85■■■□□ 2.05
SSBP4-205ENST00000598159 SMARCA5O60264 1052 aaPredicted RBP27.85■■■□□ 2.05
SSBP4-205ENST00000598159 GDF11O95390 407 aa27.85■■■□□ 2.05
SSBP4-205ENST00000598159 TMOD4Q9NZQ9 345 aa27.85■■■□□ 2.05
SSBP4-205ENST00000598159 ZBTB21Q9ULJ3 1066 aa27.85■■■□□ 2.05
SSBP4-205ENST00000598159 USP17L10C9JJH3 530 aa27.84■■■□□ 2.05
SSBP4-205ENST00000598159 POLR3DP05423 398 aaPredicted RBP27.84■■■□□ 2.05
SSBP4-205ENST00000598159 RAET1EQ8TD07 263 aa27.84■■■□□ 2.05
SSBP4-205ENST00000598159 ADD2P35612 726 aa27.83■■■□□ 2.05
SSBP4-205ENST00000598159 GCLCP48506 637 aaPredicted RBP27.83■■■□□ 2.05
SSBP4-205ENST00000598159 MTMR2Q13614 643 aa27.83■■■□□ 2.05
SSBP4-205ENST00000598159 MYPNQ86TC9 1320 aa27.83■■■□□ 2.05
SSBP4-205ENST00000598159 KIAA0100Q14667 2235 aaKnown RBP27.83■■■□□ 2.05
SSBP4-205ENST00000598159 MGAMO43451 1857 aa27.83■■■□□ 2.04
SSBP4-205ENST00000598159 PLCD1P51178 756 aa27.82■■■□□ 2.04
SSBP4-205ENST00000598159 CERKLQ49MI3 558 aaPredicted RBP27.82■■■□□ 2.04
SSBP4-205ENST00000598159 ANKRD13CQ8N6S4 541 aa27.82■■■□□ 2.04
SSBP4-205ENST00000598159 SH3TC2Q8TF17 1288 aa27.82■■■□□ 2.04
SSBP4-205ENST00000598159 LOC285556D6RIA3 1793 aa27.81■■■□□ 2.04
SSBP4-205ENST00000598159 GH2P01242 217 aa27.81■■■□□ 2.04
SSBP4-205ENST00000598159 HOXA7P31268 230 aaPredicted RBP27.81■■■□□ 2.04
SSBP4-205ENST00000598159 FAM110CQ1W6H9 321 aa27.81■■■□□ 2.04
SSBP4-205ENST00000598159 ZSCAN25Q6NSZ9 544 aa27.81■■■□□ 2.04
SSBP4-205ENST00000598159 ASCC2Q9H1I8 757 aaPredicted RBP27.81■■■□□ 2.04
SSBP4-205ENST00000598159 ECHDC1Q9NTX5 307 aa27.81■■■□□ 2.04
SSBP4-205ENST00000598159 MCM9Q9NXL9 1143 aa27.81■■■□□ 2.04
SSBP4-205ENST00000598159 UBE3CQ15386 1083 aa27.8■■■□□ 2.04
SSBP4-205ENST00000598159 SHROOM1Q2M3G4 852 aaPredicted RBP27.8■■■□□ 2.04
SSBP4-205ENST00000598159 LCORLQ8N3X6 602 aa27.8■■■□□ 2.04
SSBP4-205ENST00000598159 CABP5Q9NP86 173 aa27.8■■■□□ 2.04
SSBP4-205ENST00000598159 RBBP6Q7Z6E9 1792 aaKnown RBP27.8■■■□□ 2.04
SSBP4-205ENST00000598159 EN2P19622 333 aaPredicted RBP27.79■■■□□ 2.04
SSBP4-205ENST00000598159 GRK4P32298 578 aa27.79■■■□□ 2.04
SSBP4-205ENST00000598159 DCP1AQ9NPI6 582 aaPredicted RBP27.79■■■□□ 2.04
SSBP4-205ENST00000598159 TNPO2O14787 897 aaKnown RBP27.78■■■□□ 2.04
SSBP4-205ENST00000598159 RRP1P56182 461 aaKnown RBP27.78■■■□□ 2.04
SSBP4-205ENST00000598159 PRKCZQ05513 592 aa27.78■■■□□ 2.04
SSBP4-205ENST00000598159 GABPAQ06546 454 aa27.78■■■□□ 2.04
SSBP4-205ENST00000598159 ABCB5Q2M3G0 1257 aa27.78■■■□□ 2.04
SSBP4-205ENST00000598159 USP17L2Q6R6M4 530 aa27.78■■■□□ 2.04
SSBP4-205ENST00000598159 SDR42E1Q8WUS8 393 aa27.78■■■□□ 2.04
SSBP4-205ENST00000598159 GPATCH3Q96I76 525 aa27.78■■■□□ 2.04
SSBP4-205ENST00000598159 ARMT1Q9H993 441 aa27.78■■■□□ 2.04
SSBP4-205ENST00000598159 ATP8A2Q9NTI2 1148 aa27.78■■■□□ 2.04
SSBP4-205ENST00000598159 TAOK2Q9UL54 1235 aa27.78■■■□□ 2.04
SSBP4-205ENST00000598159 IRX3P78415 501 aaPredicted RBP27.77■■■□□ 2.04
SSBP4-205ENST00000598159 COA7Q96BR5 231 aa27.77■■■□□ 2.04
SSBP4-205ENST00000598159 GABRQQ9UN88 632 aa27.77■■■□□ 2.04
SSBP4-205ENST00000598159 PCDHB15Q9Y5E8 787 aa27.77■■■□□ 2.04
SSBP4-205ENST00000598159 PDE4DIPQ5VU43 2346 aa27.76■■■□□ 2.04
SSBP4-205ENST00000598159 SHMT1P34896 483 aa27.76■■■□□ 2.03
SSBP4-205ENST00000598159 EMILIN3Q9NT22 766 aa27.76■■■□□ 2.03
SSBP4-205ENST00000598159 CENPFP49454 3210 aa27.75■■■□□ 2.03
SSBP4-205ENST00000598159 MBD4O95243 580 aa27.75■■■□□ 2.03
SSBP4-205ENST00000598159 MYCP01106 439 aaPredicted RBP27.75■■■□□ 2.03
SSBP4-205ENST00000598159 FLT3LGP49771 235 aa27.75■■■□□ 2.03
SSBP4-205ENST00000598159 RAB3GAP1Q15042 981 aa27.75■■■□□ 2.03
SSBP4-205ENST00000598159 SLFNL1Q499Z3 407 aa27.75■■■□□ 2.03
SSBP4-205ENST00000598159 SLAIN1Q8ND83 568 aa27.75■■■□□ 2.03
SSBP4-205ENST00000598159 P2RX7Q99572 595 aaKnown RBP27.75■■■□□ 2.03
SSBP4-205ENST00000598159 TNRC18O15417 2968 aaPredicted RBP27.75■■■□□ 2.03
SSBP4-205ENST00000598159 USP14P54578 494 aa27.74■■■□□ 2.03
SSBP4-205ENST00000598159 UBXN2AP68543 259 aa27.74■■■□□ 2.03
SSBP4-205ENST00000598159 IRF5Q13568 498 aa27.74■■■□□ 2.03
SSBP4-205ENST00000598159 MORF4L1Q9UBU8 362 aa27.74■■■□□ 2.03
SSBP4-205ENST00000598159 BIN2Q9UBW5 565 aaPredicted RBP27.74■■■□□ 2.03
SSBP4-205ENST00000598159 NAV1Q8NEY1 1877 aa27.74■■■□□ 2.03
SSBP4-205ENST00000598159 DOCK3Q8IZD9 2030 aa27.74■■■□□ 2.03
SSBP4-205ENST00000598159 MYH7P12883 1935 aa27.73■■■□□ 2.03
SSBP4-205ENST00000598159 PXYLP1Q8TE99 480 aa27.73■■■□□ 2.03
SSBP4-205ENST00000598159 DDRGK1Q96HY6 314 aa27.73■■■□□ 2.03
SSBP4-205ENST00000598159 C12orf42Q96LP6 360 aa27.73■■■□□ 2.03
SSBP4-205ENST00000598159 SWAP70Q9UH65 585 aa27.73■■■□□ 2.03
SSBP4-205ENST00000598159 PRKAB2O43741 272 aa27.72■■■□□ 2.03
SSBP4-205ENST00000598159 ADCY3O60266 1144 aa27.72■■■□□ 2.03
SSBP4-205ENST00000598159 AMOTL1Q8IY63 956 aa27.72■■■□□ 2.03
SSBP4-205ENST00000598159 GTF3C2Q8WUA4 911 aaPredicted RBP27.72■■■□□ 2.03
SSBP4-205ENST00000598159 FEZ1Q99689 392 aa27.72■■■□□ 2.03
SSBP4-205ENST00000598159 KIAA1683Q9H0B3 1180 aa27.72■■■□□ 2.03
SSBP4-205ENST00000598159 DDX60LQ5H9U9 1706 aaKnown RBP27.72■■■□□ 2.03
SSBP4-205ENST00000598159 HERVK_113P62684 666 aa27.71■■■□□ 2.03
SSBP4-205ENST00000598159 MTFR1Q15390 333 aa27.71■■■□□ 2.03
SSBP4-205ENST00000598159 KBTBD3Q8NAB2 608 aa27.71■■■□□ 2.03
SSBP4-205ENST00000598159 GPRC5AQ8NFJ5 357 aa27.7■■■□□ 2.02
SSBP4-205ENST00000598159 NKX2-3Q8TAU0 364 aa27.7■■■□□ 2.02
SSBP4-205ENST00000598159 PUS7LQ9H0K6 701 aaKnown RBP27.7■■■□□ 2.02
SSBP4-205ENST00000598159 SLC4A4Q9Y6R1 1079 aa27.7■■■□□ 2.02
SSBP4-205ENST00000598159 USP17L15C9J2P7 530 aa27.69■■■□□ 2.02
SSBP4-205ENST00000598159 USP17L13C9JLJ4 530 aa27.69■■■□□ 2.02
SSBP4-205ENST00000598159 USP17L11C9JVI0 530 aa27.69■■■□□ 2.02
SSBP4-205ENST00000598159 USP17L18D6R9N7 530 aa27.69■■■□□ 2.02
SSBP4-205ENST00000598159 USP17L22D6RA61 530 aa27.69■■■□□ 2.02
SSBP4-205ENST00000598159 USP17L17D6RBQ6 530 aa27.69■■■□□ 2.02
SSBP4-205ENST00000598159 USP17L19D6RCP7 530 aa27.69■■■□□ 2.02
SSBP4-205ENST00000598159 USP17L20D6RJB6 530 aa27.69■■■□□ 2.02
SSBP4-205ENST00000598159 CHGBP05060 677 aa27.69■■■□□ 2.02
SSBP4-205ENST00000598159 CYP2D6P10635 497 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms