RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 CEP85Q6P2H3 762 aa14.81□□□□□ -0.04
SOX2-OT-228ENST00000597828 CRACR2BQ8N4Y2 399 aaPredicted RBP14.81□□□□□ -0.04
SOX2-OT-228ENST00000597828 MIGA1Q8NAN2 632 aa14.81□□□□□ -0.04
SOX2-OT-228ENST00000597828 NKX2-3Q8TAU0 364 aa14.81□□□□□ -0.04
SOX2-OT-228ENST00000597828 PANK1Q8TE04 598 aa14.81□□□□□ -0.04
SOX2-OT-228ENST00000597828 DPF3Q92784 378 aa14.81□□□□□ -0.04
SOX2-OT-228ENST00000597828 ZNF512BQ96KM6 892 aaPredicted RBP14.81□□□□□ -0.04
SOX2-OT-228ENST00000597828 ANTXR1Q9H6X2 564 aa14.81□□□□□ -0.04
SOX2-OT-228ENST00000597828 EXOC6BQ9Y2D4 811 aa14.81□□□□□ -0.04
SOX2-OT-228ENST00000597828 MYH4Q9Y623 1939 aa14.81□□□□□ -0.04
SOX2-OT-228ENST00000597828 IDH1O75874 414 aaKnown RBP14.8□□□□□ -0.04
SOX2-OT-228ENST00000597828 PLCG2P16885 1265 aa14.8□□□□□ -0.04
SOX2-OT-228ENST00000597828 CYP7A1P22680 504 aa14.8□□□□□ -0.04
SOX2-OT-228ENST00000597828 TRIM32Q13049 653 aa14.8□□□□□ -0.04
SOX2-OT-228ENST00000597828 CHRDL2Q6WN34 429 aa14.8□□□□□ -0.04
SOX2-OT-228ENST00000597828 PXYLP1Q8TE99 480 aa14.8□□□□□ -0.04
SOX2-OT-228ENST00000597828 COA7Q96BR5 231 aa14.8□□□□□ -0.04
SOX2-OT-228ENST00000597828 DEFB118Q96PH6 123 aa14.8□□□□□ -0.04
SOX2-OT-228ENST00000597828 TBC1D2Q9BYX2 928 aa14.8□□□□□ -0.04
SOX2-OT-228ENST00000597828 DHX36Q9H2U1 1008 aaKnown RBP14.8□□□□□ -0.04
SOX2-OT-228ENST00000597828 AS3MTQ9HBK9 375 aa14.8□□□□□ -0.04
SOX2-OT-228ENST00000597828 ZBTB21Q9ULJ3 1066 aa14.8□□□□□ -0.04
SOX2-OT-228ENST00000597828 SGPL1O95470 568 aa14.79□□□□□ -0.04
SOX2-OT-228ENST00000597828 ASNSP08243 561 aa14.79□□□□□ -0.04
SOX2-OT-228ENST00000597828 RANBP2P49792 3224 aaKnown RBP14.79□□□□□ -0.04
SOX2-OT-228ENST00000597828 METTL16Q86W50 562 aaKnown RBP14.79□□□□□ -0.04
SOX2-OT-228ENST00000597828 MAGEB6Q8N7X4 407 aa14.79□□□□□ -0.04
SOX2-OT-228ENST00000597828 WDR18Q9BV38 432 aa14.79□□□□□ -0.04
SOX2-OT-228ENST00000597828 GCLCP48506 637 aaPredicted RBP14.78□□□□□ -0.04
SOX2-OT-228ENST00000597828 BACE1P56817 501 aa14.78□□□□□ -0.04
SOX2-OT-228ENST00000597828 PABPC4Q13310 644 aaKnown RBP eCLIP14.78□□□□□ -0.04
SOX2-OT-228ENST00000597828 AACSQ86V21 672 aa14.78□□□□□ -0.04
SOX2-OT-228ENST00000597828 DIS3LQ8TF46 1054 aaKnown RBP14.78□□□□□ -0.04
SOX2-OT-228ENST00000597828 TRIM34Q9BYJ4 488 aa14.78□□□□□ -0.04
SOX2-OT-228ENST00000597828 TXNRD2Q9NNW7 524 aa14.78□□□□□ -0.04
SOX2-OT-228ENST00000597828 IL1RAPL2Q9NP60 686 aa14.78□□□□□ -0.04
SOX2-OT-228ENST00000597828 PAK6Q9NQU5 681 aaPredicted RBP14.78□□□□□ -0.04
SOX2-OT-228ENST00000597828 ZNF236Q9UL36 1845 aa14.78□□□□□ -0.04
SOX2-OT-228ENST00000597828 GREB1LQ9C091 1923 aaPredicted RBP14.77□□□□□ -0.04
SOX2-OT-228ENST00000597828 IRX3P78415 501 aaPredicted RBP14.77□□□□□ -0.05
SOX2-OT-228ENST00000597828 EVX2Q03828 476 aa14.77□□□□□ -0.05
SOX2-OT-228ENST00000597828 P2RX7Q99572 595 aaKnown RBP14.77□□□□□ -0.05
SOX2-OT-228ENST00000597828 HTATIP2Q9BUP3 242 aa14.77□□□□□ -0.05
SOX2-OT-228ENST00000597828 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.77□□□□□ -0.05
SOX2-OT-228ENST00000597828 TMOD4Q9NZQ9 345 aa14.77□□□□□ -0.05
SOX2-OT-228ENST00000597828 RBM27Q9P2N5 1060 aaKnown RBP14.77□□□□□ -0.05
SOX2-OT-228ENST00000597828 MORF4L1Q9UBU8 362 aa14.77□□□□□ -0.05
SOX2-OT-228ENST00000597828 GJD2Q9UKL4 321 aa14.77□□□□□ -0.05
SOX2-OT-228ENST00000597828 SMCHD1A6NHR9 2005 aa14.76□□□□□ -0.05
SOX2-OT-228ENST00000597828 ZBED9Q6R2W3 1325 aa14.76□□□□□ -0.05
SOX2-OT-228ENST00000597828 USP17L10C9JJH3 530 aa14.76□□□□□ -0.05
SOX2-OT-228ENST00000597828 GH2P01242 217 aa14.76□□□□□ -0.05
SOX2-OT-228ENST00000597828 TFRCP02786 760 aaKnown RBP14.76□□□□□ -0.05
SOX2-OT-228ENST00000597828 HLA-DOAP06340 250 aa14.76□□□□□ -0.05
SOX2-OT-228ENST00000597828 USP5P45974 858 aa14.76□□□□□ -0.05
SOX2-OT-228ENST00000597828 HERVK_113P62684 666 aa14.76□□□□□ -0.05
SOX2-OT-228ENST00000597828 ZYXQ15942 572 aaKnown RBP14.76□□□□□ -0.05
SOX2-OT-228ENST00000597828 POTEEQ6S8J3 1075 aa14.76□□□□□ -0.05
SOX2-OT-228ENST00000597828 FOXP4Q8IVH2 680 aaPredicted RBP14.76□□□□□ -0.05
SOX2-OT-228ENST00000597828 TRIB2Q92519 343 aa14.76□□□□□ -0.05
SOX2-OT-228ENST00000597828 EMILIN3Q9NT22 766 aa14.76□□□□□ -0.05
SOX2-OT-228ENST00000597828 LTBP2Q14767 1821 aa14.76□□□□□ -0.05
SOX2-OT-228ENST00000597828 APBB1O00213 710 aa14.75□□□□□ -0.05
SOX2-OT-228ENST00000597828 HMGCRP04035 888 aa14.75□□□□□ -0.05
SOX2-OT-228ENST00000597828 CYP2B6P20813 491 aa14.75□□□□□ -0.05
SOX2-OT-228ENST00000597828 HOXA7P31268 230 aaPredicted RBP14.75□□□□□ -0.05
SOX2-OT-228ENST00000597828 PAWRQ96IZ0 340 aaKnown RBP14.75□□□□□ -0.05
SOX2-OT-228ENST00000597828 PAGR1Q9BTK6 254 aa14.75□□□□□ -0.05
SOX2-OT-228ENST00000597828 CRISPLD2Q9H0B8 497 aa14.75□□□□□ -0.05
SOX2-OT-228ENST00000597828 BCL11AQ9H165 835 aa14.75□□□□□ -0.05
SOX2-OT-228ENST00000597828 PORCNQ9H237 461 aa14.75□□□□□ -0.05
SOX2-OT-228ENST00000597828 MCM3APO60318 1980 aa14.74□□□□□ -0.05
SOX2-OT-228ENST00000597828 Q3C1V9 767 aa14.74□□□□□ -0.05
SOX2-OT-228ENST00000597828 RIOK1Q9BRS2 568 aaKnown RBP14.74□□□□□ -0.05
SOX2-OT-228ENST00000597828 RBPJLQ9UBG7 517 aa14.74□□□□□ -0.05
SOX2-OT-228ENST00000597828 C19orf81C9J6K1 198 aa14.73□□□□□ -0.05
SOX2-OT-228ENST00000597828 PLCD1P51178 756 aa14.73□□□□□ -0.05
SOX2-OT-228ENST00000597828 ERVK-9P63128 1117 aa14.73□□□□□ -0.05
SOX2-OT-228ENST00000597828 ERVK-24P63145 666 aa14.73□□□□□ -0.05
SOX2-OT-228ENST00000597828 MAP3K12Q12852 859 aa14.73□□□□□ -0.05
SOX2-OT-228ENST00000597828 TATDN1Q6P1N9 297 aa14.73□□□□□ -0.05
SOX2-OT-228ENST00000597828 ERC1Q8IUD2 1116 aa14.73□□□□□ -0.05
SOX2-OT-228ENST00000597828 RHPN1Q8TCX5 695 aa14.73□□□□□ -0.05
SOX2-OT-228ENST00000597828 EDC3Q96F86 508 aaKnown RBP14.73□□□□□ -0.05
SOX2-OT-228ENST00000597828 FEZ1Q99689 392 aa14.73□□□□□ -0.05
SOX2-OT-228ENST00000597828 PRO3102Q9H379 93 aa14.73□□□□□ -0.05
SOX2-OT-228ENST00000597828 SERPINB13Q9UIV8 391 aa14.73□□□□□ -0.05
SOX2-OT-228ENST00000597828 LAMA3Q16787 3333 aa14.72□□□□□ -0.05
SOX2-OT-228ENST00000597828 SHMT1P34896 483 aa14.72□□□□□ -0.05
SOX2-OT-228ENST00000597828 RAB3GAP1Q15042 981 aa14.72□□□□□ -0.05
SOX2-OT-228ENST00000597828 CCL14Q16627 93 aa14.72□□□□□ -0.05
SOX2-OT-228ENST00000597828 SLFNL1Q499Z3 407 aa14.72□□□□□ -0.05
SOX2-OT-228ENST00000597828 USP17L2Q6R6M4 530 aa14.72□□□□□ -0.05
SOX2-OT-228ENST00000597828 GPRC5AQ8NFJ5 357 aa14.72□□□□□ -0.05
SOX2-OT-228ENST00000597828 ACER1Q8TDN7 264 aa14.72□□□□□ -0.05
SOX2-OT-228ENST00000597828 EHD4Q9H223 541 aa14.72□□□□□ -0.05
SOX2-OT-228ENST00000597828 HMX1Q9NP08 348 aaPredicted RBP14.72□□□□□ -0.05
SOX2-OT-228ENST00000597828 GINM1Q9NU53 330 aa14.72□□□□□ -0.05
SOX2-OT-228ENST00000597828 RPTORQ8N122 1335 aa14.71□□□□□ -0.05
SOX2-OT-228ENST00000597828 EVI5O60447 810 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms