RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 IFNKQ9P0W0 207 aa26.42■■□□□ 1.82
SPTBN4-209ENST00000596411 KCNJ14Q9UNX9 436 aa26.42■■□□□ 1.82
SPTBN4-209ENST00000596411 RPS8P62241 208 aaKnown RBP26.41■■□□□ 1.82
SPTBN4-209ENST00000596411 LONRF3Q496Y0 759 aa26.41■■□□□ 1.82
SPTBN4-209ENST00000596411 FILIP1Q7Z7B0 1213 aa26.41■■□□□ 1.82
SPTBN4-209ENST00000596411 IQCA1Q86XH1 822 aa26.41■■□□□ 1.82
SPTBN4-209ENST00000596411 CBFA2T2O43439 604 aa26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 ARID5BQ14865 1188 aa26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 TPD52L1Q16890 204 aaPredicted RBP26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 CATIPQ7Z7H3 387 aa26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 NUP133Q8WUM0 1156 aa26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 C16orf45Q96MC5 204 aaPredicted RBP26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 CCDC88AQ3V6T2 1871 aa26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 BMP15O95972 392 aa26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 FANCCQ00597 558 aa26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 PNOCQ13519 176 aa26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 PKN1Q16512 942 aa26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 GLIPR1L2Q4G1C9 344 aa26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 SBK1Q52WX2 424 aa26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 KANK3Q6NY19 840 aa26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 CTR9Q6PD62 1173 aa26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 TRIML1Q8N9V2 468 aa26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 NLRP3Q96P20 1036 aa26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 PHF20Q9BVI0 1012 aa26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 ATP8A2Q9NTI2 1148 aa26.4■■□□□ 1.82
SPTBN4-209ENST00000596411 BTAF1O14981 1849 aa26.39■■□□□ 1.82
SPTBN4-209ENST00000596411 KIF2AO00139 706 aaPredicted RBP26.39■■□□□ 1.82
SPTBN4-209ENST00000596411 DYNLL1P63167 89 aaKnown RBP26.39■■□□□ 1.82
SPTBN4-209ENST00000596411 AKAP17AQ02040 695 aaKnown RBP26.39■■□□□ 1.82
SPTBN4-209ENST00000596411 IFIT1BQ5T764 474 aaKnown RBP26.39■■□□□ 1.82
SPTBN4-209ENST00000596411 OLFM4Q6UX06 510 aa26.39■■□□□ 1.82
SPTBN4-209ENST00000596411 ZNF710Q8N1W2 664 aa26.39■■□□□ 1.82
SPTBN4-209ENST00000596411 FBXW7Q969H0 707 aa26.39■■□□□ 1.82
SPTBN4-209ENST00000596411 NUTM2BA6NNL0 878 aaPredicted RBP26.38■■□□□ 1.81
SPTBN4-209ENST00000596411 NUTM2EB1AL46 878 aaPredicted RBP26.38■■□□□ 1.81
SPTBN4-209ENST00000596411 SMC2O95347 1197 aa26.38■■□□□ 1.81
SPTBN4-209ENST00000596411 TROAPQ12815 778 aa26.38■■□□□ 1.81
SPTBN4-209ENST00000596411 NUTM2AQ8IVF1 878 aaPredicted RBP26.38■■□□□ 1.81
SPTBN4-209ENST00000596411 PCDHA5Q9Y5H7 936 aa26.38■■□□□ 1.81
SPTBN4-209ENST00000596411 THSD7AQ9UPZ6 1657 aa26.38■■□□□ 1.81
SPTBN4-209ENST00000596411 SARSP49591 514 aaKnown RBP26.38■■□□□ 1.81
SPTBN4-209ENST00000596411 CCAR2Q8N163 923 aaKnown RBP26.38■■□□□ 1.81
SPTBN4-209ENST00000596411 CRNKL1Q9BZJ0 848 aaKnown RBP26.38■■□□□ 1.81
SPTBN4-209ENST00000596411 IRS2Q9Y4H2 1338 aa26.38■■□□□ 1.81
SPTBN4-209ENST00000596411 GTF2E1P29083 439 aaPredicted RBP26.37■■□□□ 1.81
SPTBN4-209ENST00000596411 HIBADHP31937 336 aaKnown RBP26.37■■□□□ 1.81
SPTBN4-209ENST00000596411 NR5A1Q13285 461 aa26.37■■□□□ 1.81
SPTBN4-209ENST00000596411 FOXP4Q8IVH2 680 aaPredicted RBP26.37■■□□□ 1.81
SPTBN4-209ENST00000596411 SETDB2Q96T68 719 aa26.37■■□□□ 1.81
SPTBN4-209ENST00000596411 PCDHB6Q9Y5E3 794 aa26.37■■□□□ 1.81
SPTBN4-209ENST00000596411 POSTNQ15063 836 aa26.36■■□□□ 1.81
SPTBN4-209ENST00000596411 CT47A1Q5JQC4 288 aaPredicted RBP26.36■■□□□ 1.81
SPTBN4-209ENST00000596411 ANKRD7Q92527 254 aa26.36■■□□□ 1.81
SPTBN4-209ENST00000596411 AATFQ9NY61 560 aaKnown RBP eCLIP26.36■■□□□ 1.81
SPTBN4-209ENST00000596411 ARPP21Q9UBL0 812 aaPredicted RBP26.36■■□□□ 1.81
SPTBN4-209ENST00000596411 DACH1Q9UI36 760 aa26.36■■□□□ 1.81
SPTBN4-209ENST00000596411 NRDCO43847 1150 aa26.36■■□□□ 1.81
SPTBN4-209ENST00000596411 KRT2P35908 639 aa26.36■■□□□ 1.81
SPTBN4-209ENST00000596411 MECOMQ03112 1051 aa26.36■■□□□ 1.81
SPTBN4-209ENST00000596411 FAM98CQ17RN3 349 aaKnown RBP26.36■■□□□ 1.81
SPTBN4-209ENST00000596411 TMTC3Q6ZXV5 915 aa26.36■■□□□ 1.81
SPTBN4-209ENST00000596411 TMC6Q7Z403 805 aa26.36■■□□□ 1.81
SPTBN4-209ENST00000596411 MLKLQ8NB16 471 aa26.36■■□□□ 1.81
SPTBN4-209ENST00000596411 SPATA20Q8TB22 786 aa26.36■■□□□ 1.81
SPTBN4-209ENST00000596411 SHISA4Q96DD7 197 aa26.36■■□□□ 1.81
SPTBN4-209ENST00000596411 PSDA5PKW4 1024 aaPredicted RBP26.35■■□□□ 1.81
SPTBN4-209ENST00000596411 WTIPA6NIX2 430 aaPredicted RBP26.35■■□□□ 1.81
SPTBN4-209ENST00000596411 TUBB4AP04350 444 aa26.35■■□□□ 1.81
SPTBN4-209ENST00000596411 CEP135Q66GS9 1140 aa26.35■■□□□ 1.81
SPTBN4-209ENST00000596411 OXER1Q8TDS5 423 aa26.35■■□□□ 1.81
SPTBN4-209ENST00000596411 DCP1AQ9NPI6 582 aaPredicted RBP26.35■■□□□ 1.81
SPTBN4-209ENST00000596411 LY75O60449 1722 aa26.35■■□□□ 1.81
SPTBN4-209ENST00000596411 TRIM75PA6NK02 468 aa26.34■■□□□ 1.81
SPTBN4-209ENST00000596411 SFPQP23246 707 aaKnown RBP eCLIP26.34■■□□□ 1.81
SPTBN4-209ENST00000596411 ARMCX5Q6P1M9 558 aa26.34■■□□□ 1.81
SPTBN4-209ENST00000596411 TPTE2Q6XPS3 522 aa26.34■■□□□ 1.81
SPTBN4-209ENST00000596411 NBPF5PQ86XG9 351 aaPredicted RBP26.34■■□□□ 1.81
SPTBN4-209ENST00000596411 LMOD1P29536 600 aaPredicted RBP26.34■■□□□ 1.81
SPTBN4-209ENST00000596411 PTPN14Q15678 1187 aa26.34■■□□□ 1.81
SPTBN4-209ENST00000596411 UBE2Q2Q8WVN8 375 aa26.34■■□□□ 1.81
SPTBN4-209ENST00000596411 TNFRSF25Q93038 417 aa26.34■■□□□ 1.81
SPTBN4-209ENST00000596411 BRMS1Q9HCU9 246 aa26.34■■□□□ 1.81
SPTBN4-209ENST00000596411 TAF1LQ8IZX4 1826 aa26.33■■□□□ 1.81
SPTBN4-209ENST00000596411 CNTNAP5Q8WYK1 1306 aa26.33■■□□□ 1.81
SPTBN4-209ENST00000596411 USP17L12C9JPN9 530 aa26.33■■□□□ 1.81
SPTBN4-209ENST00000596411 USP17L21D6R901 530 aa26.33■■□□□ 1.81
SPTBN4-209ENST00000596411 ACTN4O43707 911 aaKnown RBP26.33■■□□□ 1.81
SPTBN4-209ENST00000596411 MORC3Q14149 939 aa26.33■■□□□ 1.81
SPTBN4-209ENST00000596411 SPTY2D1Q68D10 685 aaPredicted RBP26.33■■□□□ 1.81
SPTBN4-209ENST00000596411 CMTR1Q8N1G2 835 aaKnown RBP26.33■■□□□ 1.81
SPTBN4-209ENST00000596411 CCDC112Q8NEF3 446 aa26.33■■□□□ 1.81
SPTBN4-209ENST00000596411 FERMT2Q96AC1 680 aa26.33■■□□□ 1.81
SPTBN4-209ENST00000596411 CCDC34Q96HJ3 373 aa26.33■■□□□ 1.81
SPTBN4-209ENST00000596411 MAN1B1Q9UKM7 699 aa26.33■■□□□ 1.81
SPTBN4-209ENST00000596411 CABP5Q9NP86 173 aa26.32■■□□□ 1.8
SPTBN4-209ENST00000596411 ZPR1O75312 459 aa26.32■■□□□ 1.8
SPTBN4-209ENST00000596411 BMP6P22004 513 aa26.32■■□□□ 1.8
SPTBN4-209ENST00000596411 TM4SF1P30408 202 aa26.32■■□□□ 1.8
SPTBN4-209ENST00000596411 GRIN1Q05586 938 aa26.32■■□□□ 1.8
SPTBN4-209ENST00000596411 BICDL1Q6ZP65 573 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms