RNA–Protein interactions for RNA: ENST00000595452.1

TMEM38A-202, Transcript of transmembrane protein 38A, humanhuman

TSL 2

Gene TMEM38A, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-202ENST00000595452 CERKLQ49MI3 558 aaPredicted RBP16.39■□□□□ 0.21
TMEM38A-202ENST00000595452 TICAM2Q86XR7 235 aa16.39■□□□□ 0.21
TMEM38A-202ENST00000595452 OTUD7AQ8TE49 926 aaPredicted RBP16.39■□□□□ 0.21
TMEM38A-202ENST00000595452 TMOD4Q9NZQ9 345 aa16.39■□□□□ 0.21
TMEM38A-202ENST00000595452 ZBTB21Q9ULJ3 1066 aa16.39■□□□□ 0.21
TMEM38A-202ENST00000595452 SLC45A1Q9Y2W3 748 aa16.39■□□□□ 0.21
TMEM38A-202ENST00000595452 SALL3Q9BXA9 1300 aa16.39■□□□□ 0.21
TMEM38A-202ENST00000595452 TLR2O60603 784 aa16.38■□□□□ 0.21
TMEM38A-202ENST00000595452 IRX6P78412 446 aaPredicted RBP16.38■□□□□ 0.21
TMEM38A-202ENST00000595452 NUCB1Q02818 461 aa16.38■□□□□ 0.21
TMEM38A-202ENST00000595452 TATDN1Q6P1N9 297 aa16.38■□□□□ 0.21
TMEM38A-202ENST00000595452 GIMAP6Q6P9H5 292 aa16.38■□□□□ 0.21
TMEM38A-202ENST00000595452 PROCA1Q8NCQ7 364 aaPredicted RBP16.38■□□□□ 0.21
TMEM38A-202ENST00000595452 NACAP1Q9BZK3 213 aa16.38■□□□□ 0.21
TMEM38A-202ENST00000595452 DNAJC18Q9H819 358 aa16.38■□□□□ 0.21
TMEM38A-202ENST00000595452 TRIM6-TRIM34B2RNG4 842 aa16.37■□□□□ 0.21
TMEM38A-202ENST00000595452 GDF11O95390 407 aa16.37■□□□□ 0.21
TMEM38A-202ENST00000595452 SPP2Q13103 211 aa16.37■□□□□ 0.21
TMEM38A-202ENST00000595452 ABCB5Q2M3G0 1257 aa16.37■□□□□ 0.21
TMEM38A-202ENST00000595452 SMCR8Q8TEV9 937 aaPredicted RBP16.37■□□□□ 0.21
TMEM38A-202ENST00000595452 FEZ1Q99689 392 aa16.37■□□□□ 0.21
TMEM38A-202ENST00000595452 WDR18Q9BV38 432 aa16.37■□□□□ 0.21
TMEM38A-202ENST00000595452 MCOLN1Q9GZU1 580 aa16.37■□□□□ 0.21
TMEM38A-202ENST00000595452 PUS7LQ9H0K6 701 aaKnown RBP16.37■□□□□ 0.21
TMEM38A-202ENST00000595452 ZNF287Q9HBT7 754 aa16.37■□□□□ 0.21
TMEM38A-202ENST00000595452 AGTPBP1Q9UPW5 1226 aa16.37■□□□□ 0.21
TMEM38A-202ENST00000595452 C19orf81C9J6K1 198 aa16.36■□□□□ 0.21
TMEM38A-202ENST00000595452 GPAA1O43292 621 aa16.36■□□□□ 0.21
TMEM38A-202ENST00000595452 GH2P01242 217 aa16.36■□□□□ 0.21
TMEM38A-202ENST00000595452 IGHDP01880 384 aa16.36■□□□□ 0.21
TMEM38A-202ENST00000595452 APPP05067 770 aa16.36■□□□□ 0.21
TMEM38A-202ENST00000595452 SLURP2P0DP57 97 aa16.36■□□□□ 0.21
TMEM38A-202ENST00000595452 TDO2P48775 406 aa16.36■□□□□ 0.21
TMEM38A-202ENST00000595452 USP17L10C9JJH3 530 aa16.35■□□□□ 0.21
TMEM38A-202ENST00000595452 MPHOSPH10O00566 681 aaKnown RBP16.35■□□□□ 0.21
TMEM38A-202ENST00000595452 PRKAB2O43741 272 aa16.35■□□□□ 0.21
TMEM38A-202ENST00000595452 PLCD1P51178 756 aa16.35■□□□□ 0.21
TMEM38A-202ENST00000595452 MTMR2Q13614 643 aa16.35■□□□□ 0.21
TMEM38A-202ENST00000595452 RAB3GAP1Q15042 981 aa16.35■□□□□ 0.21
TMEM38A-202ENST00000595452 ABHD8Q96I13 439 aa16.35■□□□□ 0.21
TMEM38A-202ENST00000595452 STRBPQ96SI9 672 aaKnown RBP16.35■□□□□ 0.21
TMEM38A-202ENST00000595452 USP17L12C9JPN9 530 aa16.34■□□□□ 0.21
TMEM38A-202ENST00000595452 USP17L21D6R901 530 aa16.34■□□□□ 0.21
TMEM38A-202ENST00000595452 SLC3A2P08195 630 aaKnown RBP16.34■□□□□ 0.21
TMEM38A-202ENST00000595452 OSBPP22059 807 aa16.34■□□□□ 0.21
TMEM38A-202ENST00000595452 USP14P54578 494 aa16.34■□□□□ 0.21
TMEM38A-202ENST00000595452 HMGCS2P54868 508 aa16.34■□□□□ 0.21
TMEM38A-202ENST00000595452 BACE1P56817 501 aa16.34■□□□□ 0.21
TMEM38A-202ENST00000595452 SLFNL1Q499Z3 407 aa16.34■□□□□ 0.21
TMEM38A-202ENST00000595452 TMEM179Q6ZVK1 233 aa16.34■□□□□ 0.21
TMEM38A-202ENST00000595452 CCDC84Q86UT8 332 aaPredicted RBP16.34■□□□□ 0.21
TMEM38A-202ENST00000595452 OSBP2Q969R2 916 aa16.34■□□□□ 0.21
TMEM38A-202ENST00000595452 RILPL2Q969X0 211 aa16.34■□□□□ 0.21
TMEM38A-202ENST00000595452 CCDC17Q96LX7 622 aa16.34■□□□□ 0.21
TMEM38A-202ENST00000595452 R3HDMLQ9H3Y0 253 aa16.34■□□□□ 0.21
TMEM38A-202ENST00000595452 SH2D4AQ9H788 454 aa16.34■□□□□ 0.21
TMEM38A-202ENST00000595452 EFCC1Q9HA90 598 aa16.34■□□□□ 0.21
TMEM38A-202ENST00000595452 TRIM17Q9Y577 477 aa16.34■□□□□ 0.21
TMEM38A-202ENST00000595452 CAPN15O75808 1086 aa16.33■□□□□ 0.2
TMEM38A-202ENST00000595452 GNRH1P01148 92 aa16.33■□□□□ 0.2
TMEM38A-202ENST00000595452 SHMT1P34896 483 aa16.33■□□□□ 0.2
TMEM38A-202ENST00000595452 MFAP1P55081 439 aaKnown RBP16.33■□□□□ 0.2
TMEM38A-202ENST00000595452 IRX3P78415 501 aaPredicted RBP16.33■□□□□ 0.2
TMEM38A-202ENST00000595452 GABPAQ06546 454 aa16.33■□□□□ 0.2
TMEM38A-202ENST00000595452 SH3D19Q5HYK7 790 aa16.33■□□□□ 0.2
TMEM38A-202ENST00000595452 ZMYM1Q5SVZ6 1142 aa16.33■□□□□ 0.2
TMEM38A-202ENST00000595452 C12orf60Q5U649 245 aa16.33■□□□□ 0.2
TMEM38A-202ENST00000595452 FBXO46Q6PJ61 603 aaPredicted RBP16.33■□□□□ 0.2
TMEM38A-202ENST00000595452 CD99L2Q8TCZ2 262 aa16.33■□□□□ 0.2
TMEM38A-202ENST00000595452 NAPBQ9H115 298 aa16.33■□□□□ 0.2
TMEM38A-202ENST00000595452 OSBPL3Q9H4L5 887 aa16.33■□□□□ 0.2
TMEM38A-202ENST00000595452 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.33■□□□□ 0.2
TMEM38A-202ENST00000595452 HIP1O00291 1037 aa16.32■□□□□ 0.2
TMEM38A-202ENST00000595452 MOGSQ13724 837 aa16.32■□□□□ 0.2
TMEM38A-202ENST00000595452 RRP1BQ14684 758 aaKnown RBP16.32■□□□□ 0.2
TMEM38A-202ENST00000595452 SBK1Q52WX2 424 aa16.32■□□□□ 0.2
TMEM38A-202ENST00000595452 GPAT2Q6NUI2 795 aa16.32■□□□□ 0.2
TMEM38A-202ENST00000595452 USP17L2Q6R6M4 530 aa16.32■□□□□ 0.2
TMEM38A-202ENST00000595452 C16orf86Q6ZW13 317 aa16.32■□□□□ 0.2
TMEM38A-202ENST00000595452 MKNK2Q9HBH9 465 aa16.32■□□□□ 0.2
TMEM38A-202ENST00000595452 ARHGEF10LQ9HCE6 1279 aa16.32■□□□□ 0.2
TMEM38A-202ENST00000595452 HELLSQ9NRZ9 838 aa16.32■□□□□ 0.2
TMEM38A-202ENST00000595452 PATL2C9JE40 543 aaKnown RBP16.31■□□□□ 0.2
TMEM38A-202ENST00000595452 M0R2C6 588 aa16.31■□□□□ 0.2
TMEM38A-202ENST00000595452 CHGBP05060 677 aa16.31■□□□□ 0.2
TMEM38A-202ENST00000595452 CYP2D6P10635 497 aa16.31■□□□□ 0.2
TMEM38A-202ENST00000595452 HOXD10P28358 340 aa16.31■□□□□ 0.2
TMEM38A-202ENST00000595452 GCLCP48506 637 aaPredicted RBP16.31■□□□□ 0.2
TMEM38A-202ENST00000595452 PRMT2P55345 433 aa16.31■□□□□ 0.2
TMEM38A-202ENST00000595452 CTR9Q6PD62 1173 aa16.31■□□□□ 0.2
TMEM38A-202ENST00000595452 GTF3C2Q8WUA4 911 aaPredicted RBP16.31■□□□□ 0.2
TMEM38A-202ENST00000595452 CPA4Q9UI42 421 aa16.31■□□□□ 0.2
TMEM38A-202ENST00000595452 ROBO3Q96MS0 1386 aa16.3■□□□□ 0.2
TMEM38A-202ENST00000595452 CCDC85CA6NKD9 419 aa16.3■□□□□ 0.2
TMEM38A-202ENST00000595452 GSG1L2A8MUP6 293 aa16.3■□□□□ 0.2
TMEM38A-202ENST00000595452 MINDY4BA8MYZ0 360 aa16.3■□□□□ 0.2
TMEM38A-202ENST00000595452 NEFLP07196 543 aa16.3■□□□□ 0.2
TMEM38A-202ENST00000595452 CYP2C8P10632 490 aa16.3■□□□□ 0.2
TMEM38A-202ENST00000595452 LACTBP83111 547 aaPredicted RBP16.3■□□□□ 0.2
TMEM38A-202ENST00000595452 C17orf99Q6UX52 265 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms