RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 ANKRD13CQ8N6S4 541 aa15.86■□□□□ 0.13
PRKCSH-218ENST00000593053 HAUS7Q99871 368 aa15.86■□□□□ 0.13
PRKCSH-218ENST00000593053 CRNKL1Q9BZJ0 848 aaKnown RBP15.86■□□□□ 0.13
PRKCSH-218ENST00000593053 EHD4Q9H223 541 aa15.86■□□□□ 0.13
PRKCSH-218ENST00000593053 GINM1Q9NU53 330 aa15.86■□□□□ 0.13
PRKCSH-218ENST00000593053 SERPINB13Q9UIV8 391 aa15.86■□□□□ 0.13
PRKCSH-218ENST00000593053 SIPA1L1O43166 1804 aa15.86■□□□□ 0.13
PRKCSH-218ENST00000593053 MYO5AQ9Y4I1 1855 aaKnown RBP15.86■□□□□ 0.13
PRKCSH-218ENST00000593053 PHIPQ8WWQ0 1821 aa15.85■□□□□ 0.13
PRKCSH-218ENST00000593053 GH2P01242 217 aa15.85■□□□□ 0.13
PRKCSH-218ENST00000593053 PLCD1P51178 756 aa15.85■□□□□ 0.13
PRKCSH-218ENST00000593053 SLFNL1Q499Z3 407 aa15.85■□□□□ 0.13
PRKCSH-218ENST00000593053 TATDN1Q6P1N9 297 aa15.85■□□□□ 0.13
PRKCSH-218ENST00000593053 LCORLQ8N3X6 602 aa15.85■□□□□ 0.13
PRKCSH-218ENST00000593053 ASCC2Q9H1I8 757 aaPredicted RBP15.85■□□□□ 0.13
PRKCSH-218ENST00000593053 TMOD4Q9NZQ9 345 aa15.85■□□□□ 0.13
PRKCSH-218ENST00000593053 USP17L10C9JJH3 530 aa15.84■□□□□ 0.13
PRKCSH-218ENST00000593053 TNPO2O14787 897 aaKnown RBP15.84■□□□□ 0.13
PRKCSH-218ENST00000593053 POLR3DP05423 398 aaPredicted RBP15.84■□□□□ 0.13
PRKCSH-218ENST00000593053 GRK4P32298 578 aa15.84■□□□□ 0.13
PRKCSH-218ENST00000593053 ADD2P35612 726 aa15.84■□□□□ 0.13
PRKCSH-218ENST00000593053 ARMT1Q9H993 441 aa15.84■□□□□ 0.13
PRKCSH-218ENST00000593053 MCM9Q9NXL9 1143 aa15.84■□□□□ 0.13
PRKCSH-218ENST00000593053 GABRQQ9UN88 632 aa15.84■□□□□ 0.13
PRKCSH-218ENST00000593053 C19orf81C9J6K1 198 aa15.83■□□□□ 0.12
PRKCSH-218ENST00000593053 GCLCP48506 637 aaPredicted RBP15.83■□□□□ 0.12
PRKCSH-218ENST00000593053 IRX3P78415 501 aaPredicted RBP15.83■□□□□ 0.12
PRKCSH-218ENST00000593053 FAM110CQ1W6H9 321 aa15.83■□□□□ 0.12
PRKCSH-218ENST00000593053 CERKLQ49MI3 558 aaPredicted RBP15.83■□□□□ 0.12
PRKCSH-218ENST00000593053 SDR42E1Q8WUS8 393 aa15.83■□□□□ 0.12
PRKCSH-218ENST00000593053 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.83■□□□□ 0.129e-7■■■□□ 17.4
PRKCSH-218ENST00000593053 DCTPP1Q9H773 170 aa15.83■□□□□ 0.12
PRKCSH-218ENST00000593053 BRCA2P51587 3418 aa15.83■□□□□ 0.12
PRKCSH-218ENST00000593053 MBD4O95243 580 aa15.82■□□□□ 0.12
PRKCSH-218ENST00000593053 CHGBP05060 677 aa15.82■□□□□ 0.12
PRKCSH-218ENST00000593053 SHMT1P34896 483 aa15.82■□□□□ 0.12
PRKCSH-218ENST00000593053 FLT3LGP49771 235 aa15.82■□□□□ 0.12
PRKCSH-218ENST00000593053 EVX2Q03828 476 aa15.82■□□□□ 0.12
PRKCSH-218ENST00000593053 RAB3GAP1Q15042 981 aa15.82■□□□□ 0.12
PRKCSH-218ENST00000593053 MTFR1Q15390 333 aa15.82■□□□□ 0.12
PRKCSH-218ENST00000593053 ABCB5Q2M3G0 1257 aa15.82■□□□□ 0.12
PRKCSH-218ENST00000593053 FEZ1Q99689 392 aa15.82■□□□□ 0.12
PRKCSH-218ENST00000593053 DCP1AQ9NPI6 582 aaPredicted RBP15.82■□□□□ 0.12
PRKCSH-218ENST00000593053 EMILIN3Q9NT22 766 aa15.82■□□□□ 0.12
PRKCSH-218ENST00000593053 ECHDC1Q9NTX5 307 aa15.82■□□□□ 0.12
PRKCSH-218ENST00000593053 BIN2Q9UBW5 565 aaPredicted RBP15.82■□□□□ 0.12
PRKCSH-218ENST00000593053 FOCADQ5VW36 1801 aa15.82■□□□□ 0.12
PRKCSH-218ENST00000593053 PRKAB2O43741 272 aa15.81■□□□□ 0.12
PRKCSH-218ENST00000593053 PTPRFP10586 1907 aa15.81■□□□□ 0.12
PRKCSH-218ENST00000593053 CYP2D6P10635 497 aa15.81■□□□□ 0.12
PRKCSH-218ENST00000593053 RRP1P56182 461 aaKnown RBP15.81■□□□□ 0.12
PRKCSH-218ENST00000593053 GABPAQ06546 454 aa15.81■□□□□ 0.12
PRKCSH-218ENST00000593053 ZYXQ15942 572 aaKnown RBP15.81■□□□□ 0.12
PRKCSH-218ENST00000593053 PRPF38BQ5VTL8 546 aaKnown RBP15.81■□□□□ 0.12
PRKCSH-218ENST00000593053 CDK5RAP2Q96SN8 1893 aa15.81■□□□□ 0.12
PRKCSH-218ENST00000593053 P2RX7Q99572 595 aaKnown RBP15.81■□□□□ 0.12
PRKCSH-218ENST00000593053 PCDHB15Q9Y5E8 787 aa15.81■□□□□ 0.12
PRKCSH-218ENST00000593053 LOC285556D6RIA3 1793 aa15.8■□□□□ 0.12
PRKCSH-218ENST00000593053 MKI67P46013 3256 aaKnown RBP15.8■□□□□ 0.12
PRKCSH-218ENST00000593053 ADCY3O60266 1144 aa15.8■□□□□ 0.12
PRKCSH-218ENST00000593053 HOXA7P31268 230 aaPredicted RBP15.8■□□□□ 0.12
PRKCSH-218ENST00000593053 UBE3CQ15386 1083 aa15.8■□□□□ 0.12
PRKCSH-218ENST00000593053 TSHZ3Q63HK5 1081 aa15.8■□□□□ 0.12
PRKCSH-218ENST00000593053 USP17L2Q6R6M4 530 aa15.8■□□□□ 0.12
PRKCSH-218ENST00000593053 SLAIN1Q8ND83 568 aa15.8■□□□□ 0.12
PRKCSH-218ENST00000593053 COA7Q96BR5 231 aa15.8■□□□□ 0.12
PRKCSH-218ENST00000593053 YTHDC1Q96MU7 727 aaKnown RBP15.8■□□□□ 0.12
PRKCSH-218ENST00000593053 CABP5Q9NP86 173 aa15.8■□□□□ 0.12
PRKCSH-218ENST00000593053 TAOK2Q9UL54 1235 aa15.8■□□□□ 0.12
PRKCSH-218ENST00000593053 ATAD5Q96QE3 1844 aa15.8■□□□□ 0.12
PRKCSH-218ENST00000593053 PEX10O60683 326 aa15.79■□□□□ 0.12
PRKCSH-218ENST00000593053 ELNP15502 786 aa15.79■□□□□ 0.12
PRKCSH-218ENST00000593053 HERVK_113P62684 666 aa15.79■□□□□ 0.12
PRKCSH-218ENST00000593053 UBXN2AP68543 259 aa15.79■□□□□ 0.12
PRKCSH-218ENST00000593053 ZSCAN25Q6NSZ9 544 aa15.79■□□□□ 0.12
PRKCSH-218ENST00000593053 ACER1Q8TDN7 264 aa15.79■□□□□ 0.12
PRKCSH-218ENST00000593053 GPATCH3Q96I76 525 aa15.79■□□□□ 0.12
PRKCSH-218ENST00000593053 ATP8A2Q9NTI2 1148 aa15.79■□□□□ 0.12
PRKCSH-218ENST00000593053 MORF4L1Q9UBU8 362 aa15.79■□□□□ 0.12
PRKCSH-218ENST00000593053 PDE4DIPQ5VU43 2346 aa15.78■□□□□ 0.12
PRKCSH-218ENST00000593053 KIAA0100Q14667 2235 aaKnown RBP15.78■□□□□ 0.12
PRKCSH-218ENST00000593053 MPHOSPH10O00566 681 aaKnown RBP15.78■□□□□ 0.12
PRKCSH-218ENST00000593053 CCL5P13501 91 aa15.78■□□□□ 0.12
PRKCSH-218ENST00000593053 GUCY1A2P33402 732 aa15.78■□□□□ 0.12
PRKCSH-218ENST00000593053 IRF5Q13568 498 aa15.78■□□□□ 0.12
PRKCSH-218ENST00000593053 SEPT2Q15019 361 aa15.78■□□□□ 0.12
PRKCSH-218ENST00000593053 SLC44A5Q8NCS7 719 aa15.78■□□□□ 0.12
PRKCSH-218ENST00000593053 C12orf42Q96LP6 360 aa15.78■□□□□ 0.12
PRKCSH-218ENST00000593053 RNF208Q9H0X6 261 aa15.78■□□□□ 0.12
PRKCSH-218ENST00000593053 GPRC5AQ8NFJ5 357 aa15.77■□□□□ 0.12
PRKCSH-218ENST00000593053 PXYLP1Q8TE99 480 aa15.77■□□□□ 0.12
PRKCSH-218ENST00000593053 DYNLL2Q96FJ2 89 aa15.77■□□□□ 0.12
PRKCSH-218ENST00000593053 KIAA1683Q9H0B3 1180 aa15.77■□□□□ 0.12
PRKCSH-218ENST00000593053 PUS7LQ9H0K6 701 aaKnown RBP15.77■□□□□ 0.12
PRKCSH-218ENST00000593053 TXNRD2Q9NNW7 524 aa15.77■□□□□ 0.12
PRKCSH-218ENST00000593053 RBPJLQ9UBG7 517 aa15.77■□□□□ 0.12
PRKCSH-218ENST00000593053 SLC4A4Q9Y6R1 1079 aa15.77■□□□□ 0.12
PRKCSH-218ENST00000593053 DDX60LQ5H9U9 1706 aaKnown RBP15.77■□□□□ 0.11
PRKCSH-218ENST00000593053 MYH1P12882 1939 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 CYP2D7A0A087X1C5 515 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms