RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 SRRDQ9UH36 339 aa18■□□□□ 0.47
SF3A2-207ENST00000592839 CPA4Q9UI42 421 aa18■□□□□ 0.47
SF3A2-207ENST00000592839 PCDHB15Q9Y5E8 787 aa18■□□□□ 0.47
SF3A2-207ENST00000592839 APBB1O00213 710 aa17.99■□□□□ 0.47
SF3A2-207ENST00000592839 USP5P45974 858 aa17.99■□□□□ 0.47
SF3A2-207ENST00000592839 GCLCP48506 637 aaPredicted RBP17.99■□□□□ 0.47
SF3A2-207ENST00000592839 PABPC4Q13310 644 aaKnown RBP eCLIP17.99■□□□□ 0.47
SF3A2-207ENST00000592839 TREML2Q5T2D2 321 aa17.99■□□□□ 0.47
SF3A2-207ENST00000592839 CCDC84Q86UT8 332 aaPredicted RBP17.99■□□□□ 0.47
SF3A2-207ENST00000592839 CRACR2BQ8N4Y2 399 aaPredicted RBP17.99■□□□□ 0.47
SF3A2-207ENST00000592839 DNAJC2Q99543 621 aaKnown RBP17.99■□□□□ 0.47
SF3A2-207ENST00000592839 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.99■□□□□ 0.479e-7■■□□□ 13
SF3A2-207ENST00000592839 BOLA2Q9H3K6 86 aa17.99■□□□□ 0.47
SF3A2-207ENST00000592839 DCP1AQ9NPI6 582 aaPredicted RBP17.99■□□□□ 0.47
SF3A2-207ENST00000592839 ATP8A2Q9NTI2 1148 aa17.99■□□□□ 0.47
SF3A2-207ENST00000592839 PTCH2Q9Y6C5 1203 aa17.99■□□□□ 0.47
SF3A2-207ENST00000592839 TTC41PQ6P2S7 1318 aa17.98■□□□□ 0.47
SF3A2-207ENST00000592839 SALL3Q9BXA9 1300 aa17.98■□□□□ 0.47
SF3A2-207ENST00000592839 DOCK3Q8IZD9 2030 aa17.98■□□□□ 0.47
SF3A2-207ENST00000592839 HOXD10P28358 340 aa17.98■□□□□ 0.47
SF3A2-207ENST00000592839 SHMT1P34896 483 aa17.98■□□□□ 0.47
SF3A2-207ENST00000592839 GADL1Q6ZQY3 521 aa17.98■□□□□ 0.47
SF3A2-207ENST00000592839 LCORLQ8N3X6 602 aa17.98■□□□□ 0.47
SF3A2-207ENST00000592839 EDC3Q96F86 508 aaKnown RBP17.98■□□□□ 0.47
SF3A2-207ENST00000592839 MORF4L1Q9UBU8 362 aa17.98■□□□□ 0.47
SF3A2-207ENST00000592839 MYH8P13535 1937 aa17.98■□□□□ 0.47
SF3A2-207ENST00000592839 OSBPP22059 807 aa17.97■□□□□ 0.47
SF3A2-207ENST00000592839 PSMC4P43686 418 aa17.97■□□□□ 0.47
SF3A2-207ENST00000592839 PLCD1P51178 756 aa17.97■□□□□ 0.47
SF3A2-207ENST00000592839 HMGCS2P54868 508 aa17.97■□□□□ 0.47
SF3A2-207ENST00000592839 ZSCAN25Q6NSZ9 544 aa17.97■□□□□ 0.47
SF3A2-207ENST00000592839 NBPF11Q86T75 865 aa17.97■□□□□ 0.47
SF3A2-207ENST00000592839 KBTBD3Q8NAB2 608 aa17.97■□□□□ 0.47
SF3A2-207ENST00000592839 SAP30BPQ9UHR5 308 aaKnown RBP17.97■□□□□ 0.47
SF3A2-207ENST00000592839 GREB1LQ9C091 1923 aaPredicted RBP17.97■□□□□ 0.47
SF3A2-207ENST00000592839 BAZ2AQ9UIF9 1905 aaKnown RBP17.97■□□□□ 0.47
SF3A2-207ENST00000592839 USP17L10C9JJH3 530 aa17.96■□□□□ 0.47
SF3A2-207ENST00000592839 FCGRTP55899 365 aa17.96■□□□□ 0.47
SF3A2-207ENST00000592839 HDAC1Q13547 482 aaPredicted RBP17.96■□□□□ 0.47
SF3A2-207ENST00000592839 IRF5Q13568 498 aa17.96■□□□□ 0.47
SF3A2-207ENST00000592839 SLC9C1Q4G0N8 1177 aa17.96■□□□□ 0.47
SF3A2-207ENST00000592839 TRIM34Q9BYJ4 488 aa17.96■□□□□ 0.47
SF3A2-207ENST00000592839 SWAP70Q9UH65 585 aa17.96■□□□□ 0.47
SF3A2-207ENST00000592839 SMARCA5O60264 1052 aaPredicted RBP17.95■□□□□ 0.46
SF3A2-207ENST00000592839 MTMR2Q13614 643 aa17.95■□□□□ 0.46
SF3A2-207ENST00000592839 SMCR8Q8TEV9 937 aaPredicted RBP17.95■□□□□ 0.46
SF3A2-207ENST00000592839 GTF3C2Q8WUA4 911 aaPredicted RBP17.95■□□□□ 0.46
SF3A2-207ENST00000592839 GPATCH3Q96I76 525 aa17.95■□□□□ 0.46
SF3A2-207ENST00000592839 KIAA1683Q9H0B3 1180 aa17.95■□□□□ 0.46
SF3A2-207ENST00000592839 ASCC2Q9H1I8 757 aaPredicted RBP17.95■□□□□ 0.46
SF3A2-207ENST00000592839 GDF11O95390 407 aa17.94■□□□□ 0.46
SF3A2-207ENST00000592839 GH2P01242 217 aa17.94■□□□□ 0.46
SF3A2-207ENST00000592839 CAPN2P17655 700 aa17.94■□□□□ 0.46
SF3A2-207ENST00000592839 SHROOM1Q2M3G4 852 aaPredicted RBP17.94■□□□□ 0.46
SF3A2-207ENST00000592839 GIMAP6Q6P9H5 292 aa17.94■□□□□ 0.46
SF3A2-207ENST00000592839 LBX2Q6XYB7 198 aa17.94■□□□□ 0.46
SF3A2-207ENST00000592839 TICAM2Q86XR7 235 aa17.94■□□□□ 0.46
SF3A2-207ENST00000592839 PI4K2BQ8TCG2 481 aa17.94■□□□□ 0.46
SF3A2-207ENST00000592839 PXYLP1Q8TE99 480 aa17.94■□□□□ 0.46
SF3A2-207ENST00000592839 EMILIN3Q9NT22 766 aa17.94■□□□□ 0.46
SF3A2-207ENST00000592839 MCM9Q9NXL9 1143 aa17.94■□□□□ 0.46
SF3A2-207ENST00000592839 A0A0G2JMZ2 1700 aa17.94■□□□□ 0.46
SF3A2-207ENST00000592839 PLXNB2O15031 1838 aa17.93■□□□□ 0.46
SF3A2-207ENST00000592839 ROBO3Q96MS0 1386 aa17.93■□□□□ 0.46
SF3A2-207ENST00000592839 MBD4O95243 580 aa17.93■□□□□ 0.46
SF3A2-207ENST00000592839 ZFYP08048 801 aaPredicted RBP17.93■□□□□ 0.46
SF3A2-207ENST00000592839 GUCY1A2P33402 732 aa17.93■□□□□ 0.46
SF3A2-207ENST00000592839 CERKLQ49MI3 558 aaPredicted RBP17.93■□□□□ 0.46
SF3A2-207ENST00000592839 C12orf60Q5U649 245 aa17.93■□□□□ 0.46
SF3A2-207ENST00000592839 SDR42E1Q8WUS8 393 aa17.93■□□□□ 0.46
SF3A2-207ENST00000592839 ARMT1Q9H993 441 aa17.93■□□□□ 0.46
SF3A2-207ENST00000592839 TMOD4Q9NZQ9 345 aa17.93■□□□□ 0.46
SF3A2-207ENST00000592839 RLFQ13129 1914 aa17.93■□□□□ 0.46
SF3A2-207ENST00000592839 MYPNQ86TC9 1320 aa17.93■□□□□ 0.46
SF3A2-207ENST00000592839 POTEFA5A3E0 1075 aa17.92■□□□□ 0.46
SF3A2-207ENST00000592839 USP14P54578 494 aa17.92■□□□□ 0.46
SF3A2-207ENST00000592839 ABCB5Q2M3G0 1257 aa17.92■□□□□ 0.46
SF3A2-207ENST00000592839 USP17L2Q6R6M4 530 aa17.92■□□□□ 0.46
SF3A2-207ENST00000592839 SLAIN1Q8ND83 568 aa17.92■□□□□ 0.46
SF3A2-207ENST00000592839 GCC1Q96CN9 775 aa17.92■□□□□ 0.46
SF3A2-207ENST00000592839 TMEM106CQ9BVX2 250 aa17.92■□□□□ 0.46
SF3A2-207ENST00000592839 GLRX3O76003 335 aaKnown RBP17.91■□□□□ 0.46
SF3A2-207ENST00000592839 FMNL1O95466 1100 aaPredicted RBP17.91■□□□□ 0.46
SF3A2-207ENST00000592839 POLR3DP05423 398 aaPredicted RBP17.91■□□□□ 0.46
SF3A2-207ENST00000592839 GRK4P32298 578 aa17.91■□□□□ 0.46
SF3A2-207ENST00000592839 PRKCZQ05513 592 aa17.91■□□□□ 0.46
SF3A2-207ENST00000592839 APPBP2Q92624 585 aa17.91■□□□□ 0.46
SF3A2-207ENST00000592839 PUS7LQ9H0K6 701 aaKnown RBP17.91■□□□□ 0.46
SF3A2-207ENST00000592839 PARP14Q460N5 1801 aa17.91■□□□□ 0.46
SF3A2-207ENST00000592839 ERC2O15083 957 aa17.9■□□□□ 0.46
SF3A2-207ENST00000592839 HERVK_113P62684 666 aa17.9■□□□□ 0.46
SF3A2-207ENST00000592839 SBK1Q52WX2 424 aa17.9■□□□□ 0.46
SF3A2-207ENST00000592839 TMEM179Q6ZVK1 233 aa17.9■□□□□ 0.46
SF3A2-207ENST00000592839 C16orf86Q6ZW13 317 aa17.9■□□□□ 0.46
SF3A2-207ENST00000592839 ANKRD13CQ8N6S4 541 aa17.9■□□□□ 0.46
SF3A2-207ENST00000592839 CCDC17Q96LX7 622 aa17.9■□□□□ 0.46
SF3A2-207ENST00000592839 STRBPQ96SI9 672 aaKnown RBP17.9■□□□□ 0.46
SF3A2-207ENST00000592839 CRBNQ96SW2 442 aa17.9■□□□□ 0.46
SF3A2-207ENST00000592839 ARPP21Q9UBL0 812 aaPredicted RBP17.9■□□□□ 0.46
SF3A2-207ENST00000592839 TNPO2O14787 897 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms