RNA–Protein interactions for RNA: ENST00000592628.5

TCF3-217, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-217ENST00000592628 ZSCAN29Q8IWY8 852 aaPredicted RBP18.37■□□□□ 0.53
TCF3-217ENST00000592628 GPC2Q8N158 579 aa18.37■□□□□ 0.53
TCF3-217ENST00000592628 TMTC2Q8N394 836 aa18.37■□□□□ 0.53
TCF3-217ENST00000592628 ENAHQ8N8S7 591 aaPredicted RBP18.37■□□□□ 0.53
TCF3-217ENST00000592628 NCOA5Q9HCD5 579 aaKnown RBP18.37■□□□□ 0.53
TCF3-217ENST00000592628 SMC3Q9UQE7 1217 aa18.37■□□□□ 0.53
TCF3-217ENST00000592628 CCDC69A6NI79 296 aa18.37■□□□□ 0.53
TCF3-217ENST00000592628 MYO1BO43795 1136 aa18.37■□□□□ 0.53
TCF3-217ENST00000592628 SLURP2P0DP57 97 aa18.37■□□□□ 0.53
TCF3-217ENST00000592628 C9orf131Q5VYM1 1079 aa18.37■□□□□ 0.53
TCF3-217ENST00000592628 SAMD7Q7Z3H4 446 aa18.37■□□□□ 0.53
TCF3-217ENST00000592628 VEZTQ9HBM0 779 aa18.37■□□□□ 0.53
TCF3-217ENST00000592628 PI4KBQ9UBF8 816 aa18.37■□□□□ 0.53
TCF3-217ENST00000592628 TSPY3P0CV98 308 aa18.36■□□□□ 0.53
TCF3-217ENST00000592628 TSPY8P0CW00 308 aa18.36■□□□□ 0.53
TCF3-217ENST00000592628 GJB2P29033 226 aa18.36■□□□□ 0.53
TCF3-217ENST00000592628 EHD4Q9H223 541 aa18.36■□□□□ 0.53
TCF3-217ENST00000592628 IL17RBQ9NRM6 502 aa18.36■□□□□ 0.53
TCF3-217ENST00000592628 SWAP70Q9UH65 585 aa18.36■□□□□ 0.53
TCF3-217ENST00000592628 SLC12A7Q9Y666 1083 aa18.36■□□□□ 0.53
TCF3-217ENST00000592628 ATRNL1Q5VV63 1379 aa18.36■□□□□ 0.53
TCF3-217ENST00000592628 RXRAP19793 462 aa18.35■□□□□ 0.53
TCF3-217ENST00000592628 TBC1D10BQ4KMP7 808 aaPredicted RBP18.35■□□□□ 0.53
TCF3-217ENST00000592628 IFIT1BQ5T764 474 aaKnown RBP18.35■□□□□ 0.53
TCF3-217ENST00000592628 FKBP1CQ5VVH2 108 aa18.35■□□□□ 0.53
TCF3-217ENST00000592628 FAM151AQ8WW52 585 aa18.35■□□□□ 0.53
TCF3-217ENST00000592628 MYL10Q9BUA6 226 aa18.35■□□□□ 0.53
TCF3-217ENST00000592628 CNTNAP1P78357 1384 aa18.35■□□□□ 0.53
TCF3-217ENST00000592628 COL2A1P02458 1487 aaPredicted RBP18.35■□□□□ 0.53
TCF3-217ENST00000592628 ZBTB43O43298 467 aa18.35■□□□□ 0.53
TCF3-217ENST00000592628 CTDNEP1O95476 244 aa18.35■□□□□ 0.53
TCF3-217ENST00000592628 SHMT1P34896 483 aa18.35■□□□□ 0.53
TCF3-217ENST00000592628 DNAJC18Q9H819 358 aa18.35■□□□□ 0.53
TCF3-217ENST00000592628 TCP11L1Q9NUJ3 509 aa18.35■□□□□ 0.53
TCF3-217ENST00000592628 H7C1D1 291 aa18.34■□□□□ 0.53
TCF3-217ENST00000592628 JAK2O60674 1132 aa18.34■□□□□ 0.53
TCF3-217ENST00000592628 DDNO94850 711 aaPredicted RBP18.34■□□□□ 0.53
TCF3-217ENST00000592628 METAP2P50579 478 aaKnown RBP eCLIP18.34■□□□□ 0.537e-11■■□□□ 11.7
TCF3-217ENST00000592628 PKP1Q13835 747 aa18.34■□□□□ 0.53
TCF3-217ENST00000592628 RCSD1Q6JBY9 416 aa18.34■□□□□ 0.53
TCF3-217ENST00000592628 SYNE3Q6ZMZ3 975 aa18.34■□□□□ 0.53
TCF3-217ENST00000592628 MICU3Q86XE3 530 aa18.34■□□□□ 0.53
TCF3-217ENST00000592628 FOXP4Q8IVH2 680 aaPredicted RBP18.34■□□□□ 0.53
TCF3-217ENST00000592628 NEDD1Q8NHV4 660 aa18.34■□□□□ 0.53
TCF3-217ENST00000592628 LLPHQ9BRT6 129 aaKnown RBP18.34■□□□□ 0.53
TCF3-217ENST00000592628 GPRC5DQ9NZD1 345 aa18.34■□□□□ 0.53
TCF3-217ENST00000592628 KIF4BQ2VIQ3 1234 aa18.33■□□□□ 0.53
TCF3-217ENST00000592628 CCDC144CPQ8IYA2 1237 aa18.33■□□□□ 0.53
TCF3-217ENST00000592628 ZNF654Q8IZM8 581 aa18.33■□□□□ 0.53
TCF3-217ENST00000592628 CRACR2BQ8N4Y2 399 aaPredicted RBP18.33■□□□□ 0.53
TCF3-217ENST00000592628 NSUN7Q8NE18 718 aaKnown RBP18.33■□□□□ 0.53
TCF3-217ENST00000592628 SMARCC2Q8TAQ2 1214 aa18.33■□□□□ 0.53
TCF3-217ENST00000592628 FAM196BA6NMK8 535 aa18.32■□□□□ 0.52
TCF3-217ENST00000592628 AKR1B1P15121 316 aa18.32■□□□□ 0.52
TCF3-217ENST00000592628 CDC27P30260 824 aa18.32■□□□□ 0.52
TCF3-217ENST00000592628 NUCB2P80303 420 aa18.32■□□□□ 0.52
TCF3-217ENST00000592628 FAM83AQ86UY5 434 aa18.32■□□□□ 0.52
TCF3-217ENST00000592628 METTL16Q86W50 562 aaKnown RBP18.32■□□□□ 0.52
TCF3-217ENST00000592628 DGKHQ86XP1 1220 aa18.32■□□□□ 0.52
TCF3-217ENST00000592628 CHMP4CQ96CF2 233 aa18.32■□□□□ 0.52
TCF3-217ENST00000592628 CSRNP1Q96S65 589 aa18.32■□□□□ 0.52
TCF3-217ENST00000592628 GOLGA8AA7E2F4 631 aa18.32■□□□□ 0.52
TCF3-217ENST00000592628 GRIN3BO60391 1043 aa18.32■□□□□ 0.52
TCF3-217ENST00000592628 ASTN2O75129 1339 aaPredicted RBP18.32■□□□□ 0.52
TCF3-217ENST00000592628 ADD1P35611 737 aaKnown RBP18.32■□□□□ 0.52
TCF3-217ENST00000592628 EPS15P42566 896 aa18.32■□□□□ 0.52
TCF3-217ENST00000592628 RAB3GAP1Q15042 981 aa18.32■□□□□ 0.52
TCF3-217ENST00000592628 CCDC178Q5BJE1 867 aa18.32■□□□□ 0.52
TCF3-217ENST00000592628 ANKS1AQ92625 1134 aa18.32■□□□□ 0.52
TCF3-217ENST00000592628 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.32■□□□□ 0.52
TCF3-217ENST00000592628 TMEM39BQ9GZU3 492 aa18.32■□□□□ 0.52
TCF3-217ENST00000592628 FAM217BQ9NTX9 383 aaPredicted RBP18.32■□□□□ 0.52
TCF3-217ENST00000592628 SCAF8Q9UPN6 1271 aaKnown RBP18.32■□□□□ 0.52
TCF3-217ENST00000592628 DHX16O60231 1041 aaKnown RBP18.31■□□□□ 0.52
TCF3-217ENST00000592628 CATIPQ7Z7H3 387 aa18.31■□□□□ 0.52
TCF3-217ENST00000592628 NUP133Q8WUM0 1156 aa18.31■□□□□ 0.52
TCF3-217ENST00000592628 TRIM34Q9BYJ4 488 aa18.31■□□□□ 0.52
TCF3-217ENST00000592628 ZDHHC9Q9Y397 364 aa18.31■□□□□ 0.52
TCF3-217ENST00000592628 NID2Q14112 1375 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 PTPDC1A2A3K4 754 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 PPFIA3O75145 1194 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 RCAN1P53805 252 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 CDAN1Q8IWY9 1227 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 TRPM4Q8TD43 1214 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 DDX11Q96FC9 970 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 PGAP2Q9UHJ9 254 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 HACL1Q9UJ83 578 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 TAOK2Q9UL54 1235 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 PLIN4Q96Q06 1357 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 CPLX1O14810 134 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 SYT1P21579 422 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 TNNI2P48788 182 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 TROAPQ12815 778 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 TATDN1Q6P1N9 297 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 FANCBQ8NB91 859 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 CEP95Q96GE4 821 aa18.3■□□□□ 0.52
TCF3-217ENST00000592628 GREB1LQ9C091 1923 aaPredicted RBP18.29■□□□□ 0.52
TCF3-217ENST00000592628 RASA3Q14644 834 aa18.29■□□□□ 0.52
TCF3-217ENST00000592628 RTN1Q16799 776 aa18.29■□□□□ 0.52
TCF3-217ENST00000592628 CERKLQ49MI3 558 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms