RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 ZNF70Q9UC06 446 aaPredicted RBP13.35□□□□□ -0.27
TUBD1-211ENST00000591548 SLC12A7Q9Y666 1083 aa13.35□□□□□ -0.27
TUBD1-211ENST00000591548 CLRN2A0PK11 232 aa13.34□□□□□ -0.27
TUBD1-211ENST00000591548 ZBTB43O43298 467 aa13.34□□□□□ -0.27
TUBD1-211ENST00000591548 ENTPD3O75355 529 aa13.34□□□□□ -0.27
TUBD1-211ENST00000591548 RXRAP19793 462 aa13.34□□□□□ -0.27
TUBD1-211ENST00000591548 SYT1P21579 422 aa13.34□□□□□ -0.27
TUBD1-211ENST00000591548 GMPSP49915 693 aaPredicted RBP13.34□□□□□ -0.27
TUBD1-211ENST00000591548 SPDYE2Q495Y8 402 aa13.34□□□□□ -0.27
TUBD1-211ENST00000591548 RCSD1Q6JBY9 416 aa13.34□□□□□ -0.27
TUBD1-211ENST00000591548 MICU3Q86XE3 530 aa13.34□□□□□ -0.27
TUBD1-211ENST00000591548 DPF2Q92785 391 aa13.34□□□□□ -0.27
TUBD1-211ENST00000591548 DHX36Q9H2U1 1008 aaKnown RBP13.34□□□□□ -0.27
TUBD1-211ENST00000591548 MYOZ2Q9NPC6 264 aa13.34□□□□□ -0.27
TUBD1-211ENST00000591548 FAM217BQ9NTX9 383 aaPredicted RBP13.34□□□□□ -0.27
TUBD1-211ENST00000591548 SERPINB13Q9UIV8 391 aa13.34□□□□□ -0.27
TUBD1-211ENST00000591548 GJA3Q9Y6H8 435 aa13.34□□□□□ -0.27
TUBD1-211ENST00000591548 WNT10BO00744 389 aa13.33□□□□□ -0.28
TUBD1-211ENST00000591548 BRD1O95696 1058 aa13.33□□□□□ -0.28
TUBD1-211ENST00000591548 EGFRP00533 1210 aa13.33□□□□□ -0.28
TUBD1-211ENST00000591548 SLURP2P0DP57 97 aa13.33□□□□□ -0.28
TUBD1-211ENST00000591548 CDC27P30260 824 aa13.33□□□□□ -0.28
TUBD1-211ENST00000591548 ADD1P35611 737 aaKnown RBP13.33□□□□□ -0.28
TUBD1-211ENST00000591548 MMP14P50281 582 aa13.33□□□□□ -0.28
TUBD1-211ENST00000591548 METAP2P50579 478 aaKnown RBP eCLIP13.33□□□□□ -0.28
TUBD1-211ENST00000591548 NBPF9Q3BBW0 867 aa13.33□□□□□ -0.28
TUBD1-211ENST00000591548 IFIT1BQ5T764 474 aaKnown RBP13.33□□□□□ -0.28
TUBD1-211ENST00000591548 ZNF654Q8IZM8 581 aa13.33□□□□□ -0.28
TUBD1-211ENST00000591548 EHD4Q9H223 541 aa13.33□□□□□ -0.28
TUBD1-211ENST00000591548 TCP11L1Q9NUJ3 509 aa13.33□□□□□ -0.28
TUBD1-211ENST00000591548 SBF1O95248 1867 aa13.33□□□□□ -0.28
TUBD1-211ENST00000591548 SIPA1L1O43166 1804 aa13.33□□□□□ -0.28
TUBD1-211ENST00000591548 DICER1Q9UPY3 1922 aaKnown RBP13.33□□□□□ -0.28
TUBD1-211ENST00000591548 PTPDC1A2A3K4 754 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 TCP10L2B9ZVM9 353 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 DHX16O60231 1041 aaKnown RBP13.32□□□□□ -0.28
TUBD1-211ENST00000591548 PPFIA3O75145 1194 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 HLA-DOAP06340 250 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 TSPY3P0CV98 308 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 TSPY8P0CW00 308 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 SHMT1P34896 483 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 MICALL2Q8IY33 904 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 CCDC144CPQ8IYA2 1237 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 CHMP4CQ96CF2 233 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 DDX11Q96FC9 970 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 DNAJC18Q9H819 358 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 NID2Q14112 1375 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 ATRNL1Q5VV63 1379 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 GOLGA8AA7E2F4 631 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 STX6O43752 255 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 NFKBIBQ15653 356 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 SYNE3Q6ZMZ3 975 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 DGKHQ86XP1 1220 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 ZSCAN29Q8IWY8 852 aaPredicted RBP13.32□□□□□ -0.28
TUBD1-211ENST00000591548 NEDD1Q8NHV4 660 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 ANKS1AQ92625 1134 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.32□□□□□ -0.28
TUBD1-211ENST00000591548 TMOD2Q9NZR1 351 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 PI4KBQ9UBF8 816 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 SWAP70Q9UH65 585 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 CNOT7Q9UIV1 285 aaKnown RBP13.32□□□□□ -0.28
TUBD1-211ENST00000591548 CNTNAP1P78357 1384 aa13.32□□□□□ -0.28
TUBD1-211ENST00000591548 COL2A1P02458 1487 aaPredicted RBP13.32□□□□□ -0.28
TUBD1-211ENST00000591548 MYCNP04198 464 aaPredicted RBP13.31□□□□□ -0.28
TUBD1-211ENST00000591548 FDPSP14324 419 aaKnown RBP13.31□□□□□ -0.28
TUBD1-211ENST00000591548 RCAN1P53805 252 aa13.31□□□□□ -0.28
TUBD1-211ENST00000591548 HMGN5P82970 282 aaKnown RBP13.31□□□□□ -0.28
TUBD1-211ENST00000591548 TROAPQ12815 778 aa13.31□□□□□ -0.28
TUBD1-211ENST00000591548 NTRK3Q16288 839 aa13.31□□□□□ -0.28
TUBD1-211ENST00000591548 FOXD4L5Q5VV16 416 aaPredicted RBP13.31□□□□□ -0.28
TUBD1-211ENST00000591548 FKBP1CQ5VVH2 108 aa13.31□□□□□ -0.28
TUBD1-211ENST00000591548 LARP1BQ659C4 914 aaKnown RBP13.31□□□□□ -0.28
TUBD1-211ENST00000591548 SAMD7Q7Z3H4 446 aa13.31□□□□□ -0.28
TUBD1-211ENST00000591548 METTL16Q86W50 562 aaKnown RBP13.31□□□□□ -0.28
TUBD1-211ENST00000591548 FAM151AQ8WW52 585 aa13.31□□□□□ -0.28
TUBD1-211ENST00000591548 FOXD4L4Q8WXT5 416 aaPredicted RBP13.31□□□□□ -0.28
TUBD1-211ENST00000591548 RNF39Q9H2S5 420 aa13.31□□□□□ -0.28
TUBD1-211ENST00000591548 WDR33Q9C0J8 1336 aaKnown RBP13.3□□□□□ -0.28
TUBD1-211ENST00000591548 FAM196BA6NMK8 535 aa13.3□□□□□ -0.28
TUBD1-211ENST00000591548 CPLX1O14810 134 aa13.3□□□□□ -0.28
TUBD1-211ENST00000591548 MYO1BO43795 1136 aa13.3□□□□□ -0.28
TUBD1-211ENST00000591548 AKR1B1P15121 316 aa13.3□□□□□ -0.28
TUBD1-211ENST00000591548 CCDC178Q5BJE1 867 aa13.3□□□□□ -0.28
TUBD1-211ENST00000591548 RBM26Q5T8P6 1007 aaKnown RBP13.3□□□□□ -0.28
TUBD1-211ENST00000591548 CATIPQ7Z7H3 387 aa13.3□□□□□ -0.28
TUBD1-211ENST00000591548 FOXP4Q8IVH2 680 aaPredicted RBP13.3□□□□□ -0.28
TUBD1-211ENST00000591548 GPC2Q8N158 579 aa13.3□□□□□ -0.28
TUBD1-211ENST00000591548 FANCBQ8NB91 859 aa13.3□□□□□ -0.28
TUBD1-211ENST00000591548 NUP133Q8WUM0 1156 aa13.3□□□□□ -0.28
TUBD1-211ENST00000591548 VEZTQ9HBM0 779 aa13.3□□□□□ -0.28
TUBD1-211ENST00000591548 MTMR6Q9Y217 621 aa13.3□□□□□ -0.28
TUBD1-211ENST00000591548 PLIN4Q96Q06 1357 aa13.29□□□□□ -0.28
TUBD1-211ENST00000591548 ZSCAN22P10073 491 aaPredicted RBP13.29□□□□□ -0.28
TUBD1-211ENST00000591548 PDCP20941 246 aa13.29□□□□□ -0.28
TUBD1-211ENST00000591548 NOVP48745 357 aa13.29□□□□□ -0.28
TUBD1-211ENST00000591548 RTN1Q16799 776 aa13.29□□□□□ -0.28
TUBD1-211ENST00000591548 TBC1D10BQ4KMP7 808 aaPredicted RBP13.29□□□□□ -0.28
TUBD1-211ENST00000591548 TATDN1Q6P1N9 297 aa13.29□□□□□ -0.28
TUBD1-211ENST00000591548 CLEC17AQ6ZS10 378 aa13.29□□□□□ -0.28
TUBD1-211ENST00000591548 CRACR2BQ8N4Y2 399 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms