RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 OSBPL5Q9H0X9 879 aaPredicted RBP12.79□□□□□ -0.36
VPS4B-207ENST00000591519 LHX6Q9UPM6 363 aa12.79□□□□□ -0.36
VPS4B-207ENST00000591519 BRCA2P51587 3418 aa12.79□□□□□ -0.36
VPS4B-207ENST00000591519 ZSWIM8A7E2V4 1837 aa12.78□□□□□ -0.36
VPS4B-207ENST00000591519 FMNL1O95466 1100 aaPredicted RBP12.78□□□□□ -0.36
VPS4B-207ENST00000591519 FCGRTP55899 365 aa12.78□□□□□ -0.36
VPS4B-207ENST00000591519 PPP4CP60510 307 aa12.78□□□□□ -0.36
VPS4B-207ENST00000591519 TNNI3KQ59H18 835 aa12.78□□□□□ -0.36
VPS4B-207ENST00000591519 TBC1D2Q9BYX2 928 aa12.78□□□□□ -0.36
VPS4B-207ENST00000591519 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.78□□□□□ -0.36
VPS4B-207ENST00000591519 RAI14Q9P0K7 980 aa12.78□□□□□ -0.36
VPS4B-207ENST00000591519 LRP2BPQ9P2M1 347 aa12.78□□□□□ -0.36
VPS4B-207ENST00000591519 FPGT-TNNI3KV9GXZ4 949 aa12.78□□□□□ -0.36
VPS4B-207ENST00000591519 ZBED9Q6R2W3 1325 aa12.78□□□□□ -0.36
VPS4B-207ENST00000591519 PHIPQ8WWQ0 1821 aa12.78□□□□□ -0.36
VPS4B-207ENST00000591519 SURF6O75683 361 aaKnown RBP12.77□□□□□ -0.37
VPS4B-207ENST00000591519 GRK4P32298 578 aa12.77□□□□□ -0.37
VPS4B-207ENST00000591519 CAP2P40123 477 aa12.77□□□□□ -0.37
VPS4B-207ENST00000591519 LSM11P83369 360 aaKnown RBP eCLIP12.77□□□□□ -0.37
VPS4B-207ENST00000591519 CCDC158Q5M9N0 1113 aa12.77□□□□□ -0.37
VPS4B-207ENST00000591519 YTHDC1Q96MU7 727 aaKnown RBP12.77□□□□□ -0.37
VPS4B-207ENST00000591519 DBNDD2Q9BQY9 259 aa12.77□□□□□ -0.37
VPS4B-207ENST00000591519 PI4KBQ9UBF8 816 aa12.77□□□□□ -0.37
VPS4B-207ENST00000591519 HERC5Q9UII4 1024 aaKnown RBP12.77□□□□□ -0.37
VPS4B-207ENST00000591519 AGTPBP1Q9UPW5 1226 aa12.77□□□□□ -0.37
VPS4B-207ENST00000591519 PTPRFP10586 1907 aa12.76□□□□□ -0.37
VPS4B-207ENST00000591519 BAG3O95817 575 aa12.76□□□□□ -0.37
VPS4B-207ENST00000591519 CYP2E1P05181 493 aaPredicted RBP12.76□□□□□ -0.37
VPS4B-207ENST00000591519 GADL1Q6ZQY3 521 aa12.76□□□□□ -0.37
VPS4B-207ENST00000591519 METTL16Q86W50 562 aaKnown RBP12.76□□□□□ -0.37
VPS4B-207ENST00000591519 PROCA1Q8NCQ7 364 aaPredicted RBP12.76□□□□□ -0.37
VPS4B-207ENST00000591519 RAET1EQ8TD07 263 aa12.76□□□□□ -0.37
VPS4B-207ENST00000591519 DHX36Q9H2U1 1008 aaKnown RBP12.76□□□□□ -0.37
VPS4B-207ENST00000591519 MYPNQ86TC9 1320 aa12.76□□□□□ -0.37
VPS4B-207ENST00000591519 DOCK1Q14185 1865 aa12.76□□□□□ -0.37
VPS4B-207ENST00000591519 TRIM75PA6NK02 468 aa12.75□□□□□ -0.37
VPS4B-207ENST00000591519 GJB1P08034 283 aa12.75□□□□□ -0.37
VPS4B-207ENST00000591519 GJA8P48165 433 aa12.75□□□□□ -0.37
VPS4B-207ENST00000591519 PRKCZQ05513 592 aa12.75□□□□□ -0.37
VPS4B-207ENST00000591519 SPP2Q13103 211 aa12.75□□□□□ -0.37
VPS4B-207ENST00000591519 IRF5Q13568 498 aa12.75□□□□□ -0.37
VPS4B-207ENST00000591519 RRP1BQ14684 758 aaKnown RBP12.75□□□□□ -0.37
VPS4B-207ENST00000591519 MTFR1Q15390 333 aa12.75□□□□□ -0.37
VPS4B-207ENST00000591519 NAA16Q6N069 864 aaPredicted RBP12.75□□□□□ -0.37
VPS4B-207ENST00000591519 FOXP4Q8IVH2 680 aaPredicted RBP12.75□□□□□ -0.37
VPS4B-207ENST00000591519 TEX11Q8IYF3 940 aa12.75□□□□□ -0.37
VPS4B-207ENST00000591519 ZNF280CQ8ND82 737 aa12.75□□□□□ -0.37
VPS4B-207ENST00000591519 NKX2-3Q8TAU0 364 aa12.75□□□□□ -0.37
VPS4B-207ENST00000591519 PXYLP1Q8TE99 480 aa12.75□□□□□ -0.37
VPS4B-207ENST00000591519 SH3RF3Q8TEJ3 882 aaPredicted RBP12.75□□□□□ -0.37
VPS4B-207ENST00000591519 SNRKQ9NRH2 765 aa12.75□□□□□ -0.37
VPS4B-207ENST00000591519 MGAMO43451 1857 aa12.74□□□□□ -0.37
VPS4B-207ENST00000591519 FAM196BA6NMK8 535 aa12.74□□□□□ -0.37
VPS4B-207ENST00000591519 USP17L5A8MUK1 530 aa12.74□□□□□ -0.37
VPS4B-207ENST00000591519 MYCP01106 439 aaPredicted RBP12.74□□□□□ -0.37
VPS4B-207ENST00000591519 RLBP1P12271 317 aa12.74□□□□□ -0.37
VPS4B-207ENST00000591519 CAPN2P17655 700 aa12.74□□□□□ -0.37
VPS4B-207ENST00000591519 SH3D19Q5HYK7 790 aa12.74□□□□□ -0.37
VPS4B-207ENST00000591519 HABP4Q5JVS0 413 aaKnown RBP12.74□□□□□ -0.37
VPS4B-207ENST00000591519 TTC39AQ5SRH9 613 aa12.74□□□□□ -0.37
VPS4B-207ENST00000591519 POTEEQ6S8J3 1075 aa12.74□□□□□ -0.37
VPS4B-207ENST00000591519 NOL10Q9BSC4 688 aaKnown RBP12.74□□□□□ -0.37
VPS4B-207ENST00000591519 WDR18Q9BV38 432 aa12.74□□□□□ -0.37
VPS4B-207ENST00000591519 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.74□□□□□ -0.37
VPS4B-207ENST00000591519 PNMA3Q9UL41 463 aa12.74□□□□□ -0.37
VPS4B-207ENST00000591519 GABRQQ9UN88 632 aa12.74□□□□□ -0.37
VPS4B-207ENST00000591519 CCL5P13501 91 aa12.73□□□□□ -0.37
VPS4B-207ENST00000591519 ZAP70P43403 619 aa12.73□□□□□ -0.37
VPS4B-207ENST00000591519 FLT3LGP49771 235 aa12.73□□□□□ -0.37
VPS4B-207ENST00000591519 UBXN2AP68543 259 aa12.73□□□□□ -0.37
VPS4B-207ENST00000591519 OS9Q13438 667 aaPredicted RBP12.73□□□□□ -0.37
VPS4B-207ENST00000591519 TREML2Q5T2D2 321 aa12.73□□□□□ -0.37
VPS4B-207ENST00000591519 TMED8Q6PL24 325 aaPredicted RBP12.73□□□□□ -0.37
VPS4B-207ENST00000591519 UBE2Q1Q7Z7E8 422 aa12.73□□□□□ -0.37
VPS4B-207ENST00000591519 ADGRA1Q86SQ6 560 aa12.73□□□□□ -0.37
VPS4B-207ENST00000591519 CCDC84Q86UT8 332 aaPredicted RBP12.73□□□□□ -0.37
VPS4B-207ENST00000591519 FTSJ3Q8IY81 847 aaKnown RBP12.73□□□□□ -0.37
VPS4B-207ENST00000591519 SMCR8Q8TEV9 937 aaPredicted RBP12.73□□□□□ -0.37
VPS4B-207ENST00000591519 EAF2Q96CJ1 260 aaPredicted RBP12.73□□□□□ -0.37
VPS4B-207ENST00000591519 SHISA4Q96DD7 197 aa12.73□□□□□ -0.37
VPS4B-207ENST00000591519 GINM1Q9NU53 330 aa12.73□□□□□ -0.37
VPS4B-207ENST00000591519 AATFQ9NY61 560 aaKnown RBP eCLIP12.73□□□□□ -0.37
VPS4B-207ENST00000591519 DBNLQ9UJU6 430 aaKnown RBP12.73□□□□□ -0.37
VPS4B-207ENST00000591519 ADCY3O60266 1144 aa12.72□□□□□ -0.37
VPS4B-207ENST00000591519 GCLCP48506 637 aaPredicted RBP12.72□□□□□ -0.37
VPS4B-207ENST00000591519 PABPC4Q13310 644 aaKnown RBP eCLIP12.72□□□□□ -0.37
VPS4B-207ENST00000591519 FAM110CQ1W6H9 321 aa12.72□□□□□ -0.37
VPS4B-207ENST00000591519 ITPRIPQ8IWB1 547 aa12.72□□□□□ -0.37
VPS4B-207ENST00000591519 ANKRD13CQ8N6S4 541 aa12.72□□□□□ -0.37
VPS4B-207ENST00000591519 TGFBRAP1Q8WUH2 860 aa12.72□□□□□ -0.37
VPS4B-207ENST00000591519 RNF208Q9H0X6 261 aa12.72□□□□□ -0.37
VPS4B-207ENST00000591519 C1orf115Q9H7X2 142 aa12.72□□□□□ -0.37
VPS4B-207ENST00000591519 AS3MTQ9HBK9 375 aa12.72□□□□□ -0.37
VPS4B-207ENST00000591519 PIH1D3Q9NQM4 214 aaKnown RBP12.72□□□□□ -0.37
VPS4B-207ENST00000591519 DOCK3Q8IZD9 2030 aa12.71□□□□□ -0.37
VPS4B-207ENST00000591519 FLT1P17948 1338 aa12.71□□□□□ -0.37
VPS4B-207ENST00000591519 C19orf81C9J6K1 198 aa12.71□□□□□ -0.37
VPS4B-207ENST00000591519 TNPO2O14787 897 aaKnown RBP12.71□□□□□ -0.37
VPS4B-207ENST00000591519 SGPL1O95470 568 aa12.71□□□□□ -0.37
VPS4B-207ENST00000591519 ASNSP08243 561 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms