RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 SP8Q8IXZ3 490 aa13.1□□□□□ -0.31
TPM4-213ENST00000591226 KCTD17Q8N5Z5 321 aa13.1□□□□□ -0.31
TPM4-213ENST00000591226 KCNG4Q8TDN1 519 aa13.1□□□□□ -0.31
TPM4-213ENST00000591226 RTFDC1Q9BY42 306 aaPredicted RBP13.1□□□□□ -0.31
TPM4-213ENST00000591226 NAV1Q8NEY1 1877 aa13.1□□□□□ -0.31
TPM4-213ENST00000591226 SPTLC2O15270 562 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 MMP10P09238 476 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 SRGNP10124 158 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 PPP4CP60510 307 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 PDE4BQ07343 736 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 SNW1Q13573 536 aaKnown RBP13.09□□□□□ -0.31
TPM4-213ENST00000591226 C12orf60Q5U649 245 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 MSL1Q68DK7 614 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 OLFM4Q6UX06 510 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 TMC4Q7Z404 712 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 NOL10Q9BSC4 688 aaKnown RBP13.09□□□□□ -0.31
TPM4-213ENST00000591226 PDCL3Q9H2J4 239 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 ATP6V0A2Q9Y487 856 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 MRVI1Q9Y6F6 885 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 COL11A2P13942 1736 aaPredicted RBP13.09□□□□□ -0.31
TPM4-213ENST00000591226 DEXIO95424 95 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 LDHCP07864 332 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 U2AF2P26368 475 aaKnown RBP eCLIP13.09□□□□□ -0.31
TPM4-213ENST00000591226 RXRBP28702 533 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 FAM160A1Q05DH4 1040 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 MFSD14BQ5SR56 506 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 ENGASEQ8NFI3 743 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 TGFBRAP1Q8WUH2 860 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.09□□□□□ -0.31
TPM4-213ENST00000591226 USP25Q9UHP3 1055 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 KCNJ14Q9UNX9 436 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 MYH6P13533 1939 aa13.09□□□□□ -0.31
TPM4-213ENST00000591226 TNS1Q9HBL0 1735 aaKnown RBP13.08□□□□□ -0.31
TPM4-213ENST00000591226 BTDP43251 543 aa13.08□□□□□ -0.31
TPM4-213ENST00000591226 TROAPQ12815 778 aa13.08□□□□□ -0.31
TPM4-213ENST00000591226 ADALQ6DHV7 355 aa13.08□□□□□ -0.31
TPM4-213ENST00000591226 MRPS27Q92552 414 aaKnown RBP13.08□□□□□ -0.31
TPM4-213ENST00000591226 DYNLL2Q96FJ2 89 aa13.08□□□□□ -0.31
TPM4-213ENST00000591226 TSPY2A6NKD2 308 aa13.08□□□□□ -0.32
TPM4-213ENST00000591226 ESPNB1AK53 854 aa13.08□□□□□ -0.32
TPM4-213ENST00000591226 RIMBP2O15034 1052 aa13.08□□□□□ -0.32
TPM4-213ENST00000591226 PLEKHA8P1O95397 391 aa13.08□□□□□ -0.32
TPM4-213ENST00000591226 MMP1P03956 469 aa13.08□□□□□ -0.32
TPM4-213ENST00000591226 NPR1P16066 1061 aa13.08□□□□□ -0.32
TPM4-213ENST00000591226 MAPKAPK5Q8IW41 473 aa13.08□□□□□ -0.32
TPM4-213ENST00000591226 FLAD1Q8NFF5 587 aa13.08□□□□□ -0.32
TPM4-213ENST00000591226 CDK5RAP2Q96SN8 1893 aa13.08□□□□□ -0.32
TPM4-213ENST00000591226 A0A1B0GVL5 298 aa13.07□□□□□ -0.32
TPM4-213ENST00000591226 A0A1W2PQ27 194 aa13.07□□□□□ -0.32
TPM4-213ENST00000591226 A0A1W2PQ64 194 aa13.07□□□□□ -0.32
TPM4-213ENST00000591226 A0A1W2PQD8 194 aa13.07□□□□□ -0.32
TPM4-213ENST00000591226 RAD21O60216 631 aa13.07□□□□□ -0.32
TPM4-213ENST00000591226 PPP2R5BQ15173 497 aa13.07□□□□□ -0.32
TPM4-213ENST00000591226 SAP30BPQ9UHR5 308 aaKnown RBP13.07□□□□□ -0.32
TPM4-213ENST00000591226 PARP3Q9Y6F1 533 aa13.07□□□□□ -0.32
TPM4-213ENST00000591226 BTBD18B2RXH4 712 aa13.07□□□□□ -0.32
TPM4-213ENST00000591226 KINO60870 393 aaKnown RBP13.07□□□□□ -0.32
TPM4-213ENST00000591226 DDAH1O94760 285 aa13.07□□□□□ -0.32
TPM4-213ENST00000591226 FUT2Q10981 343 aa13.07□□□□□ -0.32
TPM4-213ENST00000591226 DIS3L2Q8IYB7 885 aaKnown RBP13.07□□□□□ -0.32
TPM4-213ENST00000591226 SPOCK2Q92563 424 aa13.07□□□□□ -0.32
TPM4-213ENST00000591226 RNF26Q9BY78 433 aaPredicted RBP13.07□□□□□ -0.32
TPM4-213ENST00000591226 ROBO3Q96MS0 1386 aa13.07□□□□□ -0.32
TPM4-213ENST00000591226 GPR75-ASB3A0A0A6YYF3 556 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 hCG_1642624A0A1W2PR95 340 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 MARCKSP29966 332 aaPredicted RBP13.06□□□□□ -0.32
TPM4-213ENST00000591226 NDUFA8P51970 172 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 SLC39A14Q15043 492 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 SAFBQ15424 915 aaKnown RBP eCLIP13.06□□□□□ -0.32
TPM4-213ENST00000591226 ANO6Q4KMQ2 910 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 NOSTRINQ8IVI9 506 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 FMR1NBQ8N0W7 255 aaPredicted RBP13.06□□□□□ -0.32
TPM4-213ENST00000591226 FAM200AQ8TCP9 573 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 TBC1D22AQ8WUA7 517 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 RBM28Q9NW13 759 aaKnown RBP13.06□□□□□ -0.32
TPM4-213ENST00000591226 FAM205AQ6ZU69 1335 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.06□□□□□ -0.32
TPM4-213ENST00000591226 CALM1P0DP23 149 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 CALM2P0DP24 149 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 CALM3P0DP25 149 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 PDE6BP35913 854 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 GTF2IP78347 998 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 TFAP4Q01664 338 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 AXDND1Q5T1B0 1012 aaPredicted RBP13.06□□□□□ -0.32
TPM4-213ENST00000591226 SASS6Q6UVJ0 657 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 TEX11Q8IYF3 940 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 SHISA4Q96DD7 197 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 MAP3K14Q99558 947 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 WDHD1O75717 1129 aaPredicted RBP13.06□□□□□ -0.32
TPM4-213ENST00000591226 PLCD1P51178 756 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 AKAP17AQ02040 695 aaKnown RBP13.06□□□□□ -0.32
TPM4-213ENST00000591226 PTPAQ15257 358 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 PKN1Q16512 942 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 RCSD1Q6JBY9 416 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 TMTC3Q6ZXV5 915 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 AMOTL1Q8IY63 956 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 MPNDQ8N594 471 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 SLC44A5Q8NCS7 719 aa13.06□□□□□ -0.32
TPM4-213ENST00000591226 CTAGE5O15320 804 aa13.05□□□□□ -0.32
TPM4-213ENST00000591226 FBXW7Q969H0 707 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms