RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 PDCP20941 246 aa21.18■□□□□ 0.98
CTDP1-205ENST00000590599 CDK8P49336 464 aa21.18■□□□□ 0.98
CTDP1-205ENST00000590599 CACNB3P54284 484 aa21.18■□□□□ 0.98
CTDP1-205ENST00000590599 EIF6P56537 245 aaKnown RBP21.18■□□□□ 0.98
CTDP1-205ENST00000590599 SEC23AQ15436 765 aa21.18■□□□□ 0.98
CTDP1-205ENST00000590599 ZNF444Q8N0Y2 327 aaPredicted RBP21.18■□□□□ 0.98
CTDP1-205ENST00000590599 ENAHQ8N8S7 591 aaPredicted RBP21.18■□□□□ 0.98
CTDP1-205ENST00000590599 PRMT6Q96LA8 375 aaPredicted RBP21.18■□□□□ 0.98
CTDP1-205ENST00000590599 TDRD3Q9H7E2 651 aaKnown RBP21.18■□□□□ 0.98
CTDP1-205ENST00000590599 TMOD2Q9NZR1 351 aa21.18■□□□□ 0.98
CTDP1-205ENST00000590599 WDR33Q9C0J8 1336 aaKnown RBP21.18■□□□□ 0.98
CTDP1-205ENST00000590599 SPDYE2BA6NHP3 402 aa21.18■□□□□ 0.98
CTDP1-205ENST00000590599 CPLX1O14810 134 aa21.18■□□□□ 0.98
CTDP1-205ENST00000590599 BRD1O95696 1058 aa21.18■□□□□ 0.98
CTDP1-205ENST00000590599 SPDYE6P0CI01 402 aa21.18■□□□□ 0.98
CTDP1-205ENST00000590599 HMGN5P82970 282 aaKnown RBP21.18■□□□□ 0.98
CTDP1-205ENST00000590599 IFIT1BQ5T764 474 aaKnown RBP21.18■□□□□ 0.98
CTDP1-205ENST00000590599 NSUN7Q8NE18 718 aaKnown RBP21.18■□□□□ 0.98
CTDP1-205ENST00000590599 PTPDC1A2A3K4 754 aa21.17■□□□□ 0.98
CTDP1-205ENST00000590599 GOLGA8AA7E2F4 631 aa21.17■□□□□ 0.98
CTDP1-205ENST00000590599 STX6O43752 255 aa21.17■□□□□ 0.98
CTDP1-205ENST00000590599 NPM3O75607 178 aaKnown RBP21.17■□□□□ 0.98
CTDP1-205ENST00000590599 TSPY3P0CV98 308 aa21.17■□□□□ 0.98
CTDP1-205ENST00000590599 TSPY8P0CW00 308 aa21.17■□□□□ 0.98
CTDP1-205ENST00000590599 SYT1P21579 422 aa21.17■□□□□ 0.98
CTDP1-205ENST00000590599 TFAP4Q01664 338 aa21.17■□□□□ 0.98
CTDP1-205ENST00000590599 SMARCC2Q8TAQ2 1214 aa21.17■□□□□ 0.98
CTDP1-205ENST00000590599 GBP4Q96PP9 640 aa21.17■□□□□ 0.98
CTDP1-205ENST00000590599 ZDHHC9Q9Y397 364 aa21.17■□□□□ 0.98
CTDP1-205ENST00000590599 MYH8P13535 1937 aa21.17■□□□□ 0.98
CTDP1-205ENST00000590599 CTDNEP1O95476 244 aa21.16■□□□□ 0.98
CTDP1-205ENST00000590599 HSPA6P17066 643 aa21.16■□□□□ 0.98
CTDP1-205ENST00000590599 RPS12P25398 132 aaKnown RBP21.16■□□□□ 0.98
CTDP1-205ENST00000590599 TCP10Q12799 353 aa21.16■□□□□ 0.98
CTDP1-205ENST00000590599 NBR1Q14596 966 aa21.16■□□□□ 0.98
CTDP1-205ENST00000590599 FAM184AQ8NB25 1140 aa21.16■□□□□ 0.98
CTDP1-205ENST00000590599 RBM46Q8TBY0 533 aaKnown RBP21.16■□□□□ 0.98
CTDP1-205ENST00000590599 DDX11Q96FC9 970 aa21.16■□□□□ 0.98
CTDP1-205ENST00000590599 FAM198AQ9UFP1 575 aa21.16■□□□□ 0.98
CTDP1-205ENST00000590599 KIF3AQ9Y496 699 aa21.16■□□□□ 0.98
CTDP1-205ENST00000590599 PDIA4P13667 645 aaKnown RBP21.15■□□□□ 0.98
CTDP1-205ENST00000590599 RXRAP19793 462 aa21.15■□□□□ 0.98
CTDP1-205ENST00000590599 RASA1P20936 1047 aa21.15■□□□□ 0.98
CTDP1-205ENST00000590599 RCAN1P53805 252 aa21.15■□□□□ 0.98
CTDP1-205ENST00000590599 FOXD4L5Q5VV16 416 aaPredicted RBP21.15■□□□□ 0.98
CTDP1-205ENST00000590599 LARP1BQ659C4 914 aaKnown RBP21.15■□□□□ 0.98
CTDP1-205ENST00000590599 ZNF654Q8IZM8 581 aa21.15■□□□□ 0.98
CTDP1-205ENST00000590599 FOXD4L4Q8WXT5 416 aaPredicted RBP21.15■□□□□ 0.98
CTDP1-205ENST00000590599 MYL10Q9BUA6 226 aa21.15■□□□□ 0.98
CTDP1-205ENST00000590599 DHX36Q9H2U1 1008 aaKnown RBP21.15■□□□□ 0.98
CTDP1-205ENST00000590599 SERPINB13Q9UIV8 391 aa21.15■□□□□ 0.98
CTDP1-205ENST00000590599 NID2Q14112 1375 aa21.15■□□□□ 0.98
CTDP1-205ENST00000590599 CCDC178Q5BJE1 867 aa21.15■□□□□ 0.98
CTDP1-205ENST00000590599 CPLX2Q6PUV4 134 aaKnown RBP21.15■□□□□ 0.98
CTDP1-205ENST00000590599 SWAP70Q9UH65 585 aa21.15■□□□□ 0.98
CTDP1-205ENST00000590599 NMT2O60551 498 aa21.14■□□□□ 0.97
CTDP1-205ENST00000590599 ENTPD3O75355 529 aa21.14■□□□□ 0.97
CTDP1-205ENST00000590599 CDKL5O76039 1030 aa21.14■□□□□ 0.97
CTDP1-205ENST00000590599 MMP14P50281 582 aa21.14■□□□□ 0.97
CTDP1-205ENST00000590599 GABPAQ06546 454 aa21.14■□□□□ 0.97
CTDP1-205ENST00000590599 CATIPQ7Z7H3 387 aa21.14■□□□□ 0.97
CTDP1-205ENST00000590599 ZSCAN29Q8IWY8 852 aaPredicted RBP21.14■□□□□ 0.97
CTDP1-205ENST00000590599 CCDC144CPQ8IYA2 1237 aa21.14■□□□□ 0.97
CTDP1-205ENST00000590599 MTMR14Q8NCE2 650 aa21.14■□□□□ 0.97
CTDP1-205ENST00000590599 L3MBTL3Q96JM7 780 aaPredicted RBP21.14■□□□□ 0.97
CTDP1-205ENST00000590599 ZFPM1Q8IX07 1006 aa21.13■□□□□ 0.97
CTDP1-205ENST00000590599 EHD4Q9H223 541 aa21.13■□□□□ 0.97
CTDP1-205ENST00000590599 TAF1DQ9H5J8 278 aaPredicted RBP21.13■□□□□ 0.97
CTDP1-205ENST00000590599 VPS37CA5D8V6 355 aaPredicted RBP21.13■□□□□ 0.97
CTDP1-205ENST00000590599 MYO1BO43795 1136 aa21.13■□□□□ 0.97
CTDP1-205ENST00000590599 ZSCAN22P10073 491 aaPredicted RBP21.13■□□□□ 0.97
CTDP1-205ENST00000590599 RTN1Q16799 776 aa21.13■□□□□ 0.97
CTDP1-205ENST00000590599 GPC2Q8N158 579 aa21.13■□□□□ 0.97
CTDP1-205ENST00000590599 NUP133Q8WUM0 1156 aa21.13■□□□□ 0.97
CTDP1-205ENST00000590599 TCP11L1Q9NUJ3 509 aa21.13■□□□□ 0.97
CTDP1-205ENST00000590599 ZNF70Q9UC06 446 aaPredicted RBP21.13■□□□□ 0.97
CTDP1-205ENST00000590599 COL2A1P02458 1487 aaPredicted RBP21.12■□□□□ 0.97
CTDP1-205ENST00000590599 CLRN2A0PK11 232 aa21.12■□□□□ 0.97
CTDP1-205ENST00000590599 SPDYE2Q495Y8 402 aa21.12■□□□□ 0.97
CTDP1-205ENST00000590599 CRACR2BQ8N4Y2 399 aaPredicted RBP21.12■□□□□ 0.97
CTDP1-205ENST00000590599 MYOZ2Q9NPC6 264 aa21.12■□□□□ 0.97
CTDP1-205ENST00000590599 SIPA1L1O43166 1804 aa21.11■□□□□ 0.97
CTDP1-205ENST00000590599 CCDC196A0A1B0GTZ2 297 aa21.11■□□□□ 0.97
CTDP1-205ENST00000590599 DDAH1O94760 285 aa21.11■□□□□ 0.97
CTDP1-205ENST00000590599 CALM1P0DP23 149 aa21.11■□□□□ 0.97
CTDP1-205ENST00000590599 CALM2P0DP24 149 aa21.11■□□□□ 0.97
CTDP1-205ENST00000590599 CALM3P0DP25 149 aa21.11■□□□□ 0.97
CTDP1-205ENST00000590599 CDC27P30260 824 aa21.11■□□□□ 0.97
CTDP1-205ENST00000590599 ADD1P35611 737 aaKnown RBP21.11■□□□□ 0.97
CTDP1-205ENST00000590599 EPS15P42566 896 aa21.11■□□□□ 0.97
CTDP1-205ENST00000590599 GMPSP49915 693 aaPredicted RBP21.11■□□□□ 0.97
CTDP1-205ENST00000590599 EAPPQ56P03 285 aaPredicted RBP21.11■□□□□ 0.97
CTDP1-205ENST00000590599 DGKHQ86XP1 1220 aa21.11■□□□□ 0.97
CTDP1-205ENST00000590599 TRIM34Q9BYJ4 488 aa21.11■□□□□ 0.97
CTDP1-205ENST00000590599 IL17RBQ9NRM6 502 aa21.11■□□□□ 0.97
CTDP1-205ENST00000590599 PI4KBQ9UBF8 816 aa21.11■□□□□ 0.97
CTDP1-205ENST00000590599 MTMR6Q9Y217 621 aa21.11■□□□□ 0.97
CTDP1-205ENST00000590599 ATRNL1Q5VV63 1379 aa21.11■□□□□ 0.97
CTDP1-205ENST00000590599 SHTN1A0MZ66 631 aa21.1■□□□□ 0.97
CTDP1-205ENST00000590599 DDTLA6NHG4 134 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms