RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 PI4KBQ9UBF8 816 aa20.46■□□□□ 0.87
CXXC1-212ENST00000589940 TAOK2Q9UL54 1235 aa20.46■□□□□ 0.87
CXXC1-212ENST00000589940 CCDC69A6NI79 296 aa20.46■□□□□ 0.87
CXXC1-212ENST00000589940 TCP10L2B9ZVM9 353 aa20.46■□□□□ 0.87
CXXC1-212ENST00000589940 APOA5Q6Q788 366 aa20.46■□□□□ 0.87
CXXC1-212ENST00000589940 CHMP4CQ96CF2 233 aa20.46■□□□□ 0.87
CXXC1-212ENST00000589940 VEZTQ9HBM0 779 aa20.46■□□□□ 0.87
CXXC1-212ENST00000589940 HPS5Q9UPZ3 1129 aa20.46■□□□□ 0.87
CXXC1-212ENST00000589940 SMC3Q9UQE7 1217 aa20.46■□□□□ 0.87
CXXC1-212ENST00000589940 EGFRP00533 1210 aa20.45■□□□□ 0.86
CXXC1-212ENST00000589940 TSPY3P0CV98 308 aa20.45■□□□□ 0.86
CXXC1-212ENST00000589940 TSPY8P0CW00 308 aa20.45■□□□□ 0.86
CXXC1-212ENST00000589940 SLC12A7Q9Y666 1083 aa20.45■□□□□ 0.86
CXXC1-212ENST00000589940 H7C1D1 291 aa20.45■□□□□ 0.86
CXXC1-212ENST00000589940 GRIN3BO60391 1043 aa20.45■□□□□ 0.86
CXXC1-212ENST00000589940 CCT2P78371 535 aaKnown RBP20.45■□□□□ 0.86
CXXC1-212ENST00000589940 RBM26Q5T8P6 1007 aaKnown RBP20.45■□□□□ 0.86
CXXC1-212ENST00000589940 FAM151AQ8WW52 585 aa20.45■□□□□ 0.86
CXXC1-212ENST00000589940 GPRC5DQ9NZD1 345 aa20.45■□□□□ 0.86
CXXC1-212ENST00000589940 IFIT1BQ5T764 474 aaKnown RBP20.44■□□□□ 0.86
CXXC1-212ENST00000589940 SAMD7Q7Z3H4 446 aa20.44■□□□□ 0.86
CXXC1-212ENST00000589940 FAM83AQ86UY5 434 aa20.44■□□□□ 0.86
CXXC1-212ENST00000589940 TCP11L1Q9NUJ3 509 aa20.44■□□□□ 0.86
CXXC1-212ENST00000589940 CNTNAP1P78357 1384 aa20.44■□□□□ 0.86
CXXC1-212ENST00000589940 ZBTB43O43298 467 aa20.43■□□□□ 0.86
CXXC1-212ENST00000589940 NMT2O60551 498 aa20.43■□□□□ 0.86
CXXC1-212ENST00000589940 TBC1D10BQ4KMP7 808 aaPredicted RBP20.43■□□□□ 0.86
CXXC1-212ENST00000589940 CCDC178Q5BJE1 867 aa20.43■□□□□ 0.86
CXXC1-212ENST00000589940 CRACR2BQ8N4Y2 399 aaPredicted RBP20.43■□□□□ 0.86
CXXC1-212ENST00000589940 LLPHQ9BRT6 129 aaKnown RBP20.43■□□□□ 0.86
CXXC1-212ENST00000589940 NCOA5Q9HCD5 579 aaKnown RBP20.43■□□□□ 0.86
CXXC1-212ENST00000589940 SHMT1P34896 483 aa20.43■□□□□ 0.86
CXXC1-212ENST00000589940 KIF4BQ2VIQ3 1234 aa20.43■□□□□ 0.86
CXXC1-212ENST00000589940 SYNE3Q6ZMZ3 975 aa20.43■□□□□ 0.86
CXXC1-212ENST00000589940 FOXP4Q8IVH2 680 aaPredicted RBP20.43■□□□□ 0.86
CXXC1-212ENST00000589940 NEDD1Q8NHV4 660 aa20.43■□□□□ 0.86
CXXC1-212ENST00000589940 DHX16O60231 1041 aaKnown RBP20.42■□□□□ 0.86
CXXC1-212ENST00000589940 METAP2P50579 478 aaKnown RBP eCLIP20.42■□□□□ 0.86
CXXC1-212ENST00000589940 RCAN1P53805 252 aa20.42■□□□□ 0.86
CXXC1-212ENST00000589940 METTL16Q86W50 562 aaKnown RBP20.42■□□□□ 0.86
CXXC1-212ENST00000589940 MICU3Q86XE3 530 aa20.42■□□□□ 0.86
CXXC1-212ENST00000589940 CSRNP1Q96S65 589 aa20.42■□□□□ 0.86
CXXC1-212ENST00000589940 IL17RBQ9NRM6 502 aa20.42■□□□□ 0.86
CXXC1-212ENST00000589940 SIPA1L1O43166 1804 aa20.42■□□□□ 0.86
CXXC1-212ENST00000589940 GJB2P29033 226 aa20.42■□□□□ 0.86
CXXC1-212ENST00000589940 DGKHQ86XP1 1220 aa20.42■□□□□ 0.86
CXXC1-212ENST00000589940 RAB11FIP4Q86YS3 637 aa20.42■□□□□ 0.86
CXXC1-212ENST00000589940 DNAJC18Q9H819 358 aa20.42■□□□□ 0.86
CXXC1-212ENST00000589940 ZNF654Q8IZM8 581 aa20.41■□□□□ 0.86
CXXC1-212ENST00000589940 TRIM34Q9BYJ4 488 aa20.41■□□□□ 0.86
CXXC1-212ENST00000589940 NID2Q14112 1375 aa20.41■□□□□ 0.86
CXXC1-212ENST00000589940 PLIN4Q96Q06 1357 aa20.41■□□□□ 0.86
CXXC1-212ENST00000589940 DDNO94850 711 aaPredicted RBP20.41■□□□□ 0.86
CXXC1-212ENST00000589940 RCSD1Q6JBY9 416 aa20.41■□□□□ 0.86
CXXC1-212ENST00000589940 ANKS1AQ92625 1134 aa20.41■□□□□ 0.86
CXXC1-212ENST00000589940 MYL10Q9BUA6 226 aa20.41■□□□□ 0.86
CXXC1-212ENST00000589940 TNNI2P48788 182 aa20.4■□□□□ 0.86
CXXC1-212ENST00000589940 NUCB2P80303 420 aa20.4■□□□□ 0.86
CXXC1-212ENST00000589940 TNFAIP1Q13829 316 aa20.4■□□□□ 0.86
CXXC1-212ENST00000589940 NSUN7Q8NE18 718 aaKnown RBP20.4■□□□□ 0.86
CXXC1-212ENST00000589940 SMARCC2Q8TAQ2 1214 aa20.4■□□□□ 0.86
CXXC1-212ENST00000589940 GOLGA8AA7E2F4 631 aa20.39■□□□□ 0.86
CXXC1-212ENST00000589940 CTDNEP1O95476 244 aa20.39■□□□□ 0.86
CXXC1-212ENST00000589940 RXRAP19793 462 aa20.39■□□□□ 0.86
CXXC1-212ENST00000589940 CATIPQ7Z7H3 387 aa20.39■□□□□ 0.86
CXXC1-212ENST00000589940 JAK2O60674 1132 aa20.39■□□□□ 0.85
CXXC1-212ENST00000589940 DTNBO60941 627 aa20.39■□□□□ 0.85
CXXC1-212ENST00000589940 AKR1B1P15121 316 aa20.39■□□□□ 0.85
CXXC1-212ENST00000589940 TATDN1Q6P1N9 297 aa20.39■□□□□ 0.85
CXXC1-212ENST00000589940 CCDC17Q96LX7 622 aa20.39■□□□□ 0.85
CXXC1-212ENST00000589940 TMEM39BQ9GZU3 492 aa20.39■□□□□ 0.85
CXXC1-212ENST00000589940 HERC5Q9UII4 1024 aaKnown RBP20.39■□□□□ 0.85
CXXC1-212ENST00000589940 ZC3H4Q9UPT8 1303 aaKnown RBP20.39■□□□□ 0.85
CXXC1-212ENST00000589940 FAM196BA6NMK8 535 aa20.38■□□□□ 0.85
CXXC1-212ENST00000589940 CPLX1O14810 134 aa20.38■□□□□ 0.85
CXXC1-212ENST00000589940 SLURP2P0DP57 97 aa20.38■□□□□ 0.85
CXXC1-212ENST00000589940 EPS15P42566 896 aa20.38■□□□□ 0.85
CXXC1-212ENST00000589940 TRPM4Q8TD43 1214 aa20.38■□□□□ 0.85
CXXC1-212ENST00000589940 HACL1Q9UJ83 578 aa20.38■□□□□ 0.85
CXXC1-212ENST00000589940 MYH8P13535 1937 aa20.38■□□□□ 0.85
CXXC1-212ENST00000589940 PTPDC1A2A3K4 754 aa20.38■□□□□ 0.85
CXXC1-212ENST00000589940 DDAH1O94760 285 aa20.38■□□□□ 0.85
CXXC1-212ENST00000589940 HMGN5P82970 282 aaKnown RBP20.38■□□□□ 0.85
CXXC1-212ENST00000589940 RAB3GAP1Q15042 981 aa20.38■□□□□ 0.85
CXXC1-212ENST00000589940 CCDC144CPQ8IYA2 1237 aa20.38■□□□□ 0.85
CXXC1-212ENST00000589940 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.38■□□□□ 0.85
CXXC1-212ENST00000589940 CALM1P0DP23 149 aa20.37■□□□□ 0.85
CXXC1-212ENST00000589940 CALM2P0DP24 149 aa20.37■□□□□ 0.85
CXXC1-212ENST00000589940 CALM3P0DP25 149 aa20.37■□□□□ 0.85
CXXC1-212ENST00000589940 LMOD1P29536 600 aaPredicted RBP20.37■□□□□ 0.85
CXXC1-212ENST00000589940 CDC27P30260 824 aa20.37■□□□□ 0.85
CXXC1-212ENST00000589940 ADD1P35611 737 aaKnown RBP20.37■□□□□ 0.85
CXXC1-212ENST00000589940 TROAPQ12815 778 aa20.37■□□□□ 0.85
CXXC1-212ENST00000589940 PKP1Q13835 747 aa20.37■□□□□ 0.85
CXXC1-212ENST00000589940 RASA3Q14644 834 aa20.37■□□□□ 0.85
CXXC1-212ENST00000589940 KAT14Q9H8E8 782 aa20.37■□□□□ 0.85
CXXC1-212ENST00000589940 FAM217BQ9NTX9 383 aaPredicted RBP20.37■□□□□ 0.85
CXXC1-212ENST00000589940 PGAP2Q9UHJ9 254 aa20.37■□□□□ 0.85
CXXC1-212ENST00000589940 STX8Q9UNK0 236 aa20.37■□□□□ 0.85
CXXC1-212ENST00000589940 ASTN2O75129 1339 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms