RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 APPBP2Q92624 585 aa16.69■□□□□ 0.26
ERCC1-208ENST00000589165 PARK7Q99497 189 aaKnown RBP16.69■□□□□ 0.26
ERCC1-208ENST00000589165 ZBTB21Q9ULJ3 1066 aa16.69■□□□□ 0.26
ERCC1-208ENST00000589165 AGTPBP1Q9UPW5 1226 aa16.69■□□□□ 0.26
ERCC1-208ENST00000589165 ADGRA2Q96PE1 1338 aa16.69■□□□□ 0.26
ERCC1-208ENST00000589165 CAPN15O75808 1086 aa16.68■□□□□ 0.26
ERCC1-208ENST00000589165 SHMT1P34896 483 aa16.68■□□□□ 0.26
ERCC1-208ENST00000589165 PDE1AP54750 535 aa16.68■□□□□ 0.26
ERCC1-208ENST00000589165 SH3D19Q5HYK7 790 aa16.68■□□□□ 0.26
ERCC1-208ENST00000589165 FBXO46Q6PJ61 603 aaPredicted RBP16.68■□□□□ 0.26
ERCC1-208ENST00000589165 GADL1Q6ZQY3 521 aa16.68■□□□□ 0.26
ERCC1-208ENST00000589165 STRBPQ96SI9 672 aaKnown RBP16.68■□□□□ 0.26
ERCC1-208ENST00000589165 SLC4A4Q9Y6R1 1079 aa16.68■□□□□ 0.26
ERCC1-208ENST00000589165 DDX60LQ5H9U9 1706 aaKnown RBP16.68■□□□□ 0.26
ERCC1-208ENST00000589165 NUCB1Q02818 461 aa16.67■□□□□ 0.26
ERCC1-208ENST00000589165 ARHGEF6Q15052 776 aa16.67■□□□□ 0.26
ERCC1-208ENST00000589165 CERKLQ49MI3 558 aaPredicted RBP16.67■□□□□ 0.26
ERCC1-208ENST00000589165 OTOP1Q7RTM1 612 aa16.67■□□□□ 0.26
ERCC1-208ENST00000589165 CD99L2Q8TCZ2 262 aa16.67■□□□□ 0.26
ERCC1-208ENST00000589165 OSBP2Q969R2 916 aa16.67■□□□□ 0.26
ERCC1-208ENST00000589165 DDRGK1Q96HY6 314 aa16.67■□□□□ 0.26
ERCC1-208ENST00000589165 GH2P01242 217 aa16.67■□□□□ 0.26
ERCC1-208ENST00000589165 HMGCS2P54868 508 aa16.67■□□□□ 0.26
ERCC1-208ENST00000589165 BACE1P56817 501 aa16.67■□□□□ 0.26
ERCC1-208ENST00000589165 SHROOM1Q2M3G4 852 aaPredicted RBP16.67■□□□□ 0.26
ERCC1-208ENST00000589165 GIMAP6Q6P9H5 292 aa16.67■□□□□ 0.26
ERCC1-208ENST00000589165 LNPKQ9C0E8 428 aa16.67■□□□□ 0.26
ERCC1-208ENST00000589165 EFCC1Q9HA90 598 aa16.67■□□□□ 0.26
ERCC1-208ENST00000589165 SWAP70Q9UH65 585 aa16.67■□□□□ 0.26
ERCC1-208ENST00000589165 TRIM17Q9Y577 477 aa16.67■□□□□ 0.26
ERCC1-208ENST00000589165 GTF3C3Q9Y5Q9 886 aa16.67■□□□□ 0.26
ERCC1-208ENST00000589165 HTTP42858 3142 aa16.66■□□□□ 0.26
ERCC1-208ENST00000589165 C19orf81C9J6K1 198 aa16.66■□□□□ 0.26
ERCC1-208ENST00000589165 CYP2C8P10632 490 aa16.66■□□□□ 0.26
ERCC1-208ENST00000589165 CYP2D6P10635 497 aa16.66■□□□□ 0.26
ERCC1-208ENST00000589165 MTMR2Q13614 643 aa16.66■□□□□ 0.26
ERCC1-208ENST00000589165 ABCB5Q2M3G0 1257 aa16.66■□□□□ 0.26
ERCC1-208ENST00000589165 TREML2Q5T2D2 321 aa16.66■□□□□ 0.26
ERCC1-208ENST00000589165 C12orf60Q5U649 245 aa16.66■□□□□ 0.26
ERCC1-208ENST00000589165 CHD1LQ86WJ1 897 aa16.66■□□□□ 0.26
ERCC1-208ENST00000589165 TICAM2Q86XR7 235 aa16.66■□□□□ 0.26
ERCC1-208ENST00000589165 AMOTL1Q8IY63 956 aa16.66■□□□□ 0.26
ERCC1-208ENST00000589165 FSD1Q9BTV5 496 aa16.66■□□□□ 0.26
ERCC1-208ENST00000589165 HPS5Q9UPZ3 1129 aa16.66■□□□□ 0.26
ERCC1-208ENST00000589165 PHIPQ8WWQ0 1821 aa16.66■□□□□ 0.26
ERCC1-208ENST00000589165 MYH1P12882 1939 aa16.65■□□□□ 0.26
ERCC1-208ENST00000589165 NAV1Q8NEY1 1877 aa16.65■□□□□ 0.26
ERCC1-208ENST00000589165 CCDC85CA6NKD9 419 aa16.65■□□□□ 0.26
ERCC1-208ENST00000589165 USP17L10C9JJH3 530 aa16.65■□□□□ 0.26
ERCC1-208ENST00000589165 USP17L12C9JPN9 530 aa16.65■□□□□ 0.26
ERCC1-208ENST00000589165 USP17L21D6R901 530 aa16.65■□□□□ 0.26
ERCC1-208ENST00000589165 BCRP11274 1271 aa16.65■□□□□ 0.26
ERCC1-208ENST00000589165 GNAT2P19087 354 aa16.65■□□□□ 0.26
ERCC1-208ENST00000589165 LACTBP83111 547 aaPredicted RBP16.65■□□□□ 0.26
ERCC1-208ENST00000589165 CAP1Q01518 475 aa16.65■□□□□ 0.26
ERCC1-208ENST00000589165 EVX2Q03828 476 aa16.65■□□□□ 0.26
ERCC1-208ENST00000589165 PABPC4Q13310 644 aaKnown RBP eCLIP16.65■□□□□ 0.262e-6■■■□□ 17.8
ERCC1-208ENST00000589165 EVI5LQ96CN4 794 aa16.65■□□□□ 0.26
ERCC1-208ENST00000589165 CABP5Q9NP86 173 aa16.65■□□□□ 0.26
ERCC1-208ENST00000589165 CPA4Q9UI42 421 aa16.65■□□□□ 0.26
ERCC1-208ENST00000589165 PNMA3Q9UL41 463 aa16.65■□□□□ 0.26
ERCC1-208ENST00000589165 ATAD5Q96QE3 1844 aa16.64■□□□□ 0.25
ERCC1-208ENST00000589165 GSG1L2A8MUP6 293 aa16.64■□□□□ 0.25
ERCC1-208ENST00000589165 GPAA1O43292 621 aa16.64■□□□□ 0.25
ERCC1-208ENST00000589165 GNRH1P01148 92 aa16.64■□□□□ 0.25
ERCC1-208ENST00000589165 KIF22Q14807 665 aa16.64■□□□□ 0.25
ERCC1-208ENST00000589165 B4GALNT3Q6L9W6 998 aa16.64■□□□□ 0.25
ERCC1-208ENST00000589165 CTR9Q6PD62 1173 aa16.64■□□□□ 0.25
ERCC1-208ENST00000589165 ARPP21Q9UBL0 812 aaPredicted RBP16.64■□□□□ 0.25
ERCC1-208ENST00000589165 SBK1Q52WX2 424 aa16.63■□□□□ 0.25
ERCC1-208ENST00000589165 ZMYM1Q5SVZ6 1142 aa16.63■□□□□ 0.25
ERCC1-208ENST00000589165 OSBPL3Q9H4L5 887 aa16.63■□□□□ 0.25
ERCC1-208ENST00000589165 TMOD4Q9NZQ9 345 aa16.63■□□□□ 0.25
ERCC1-208ENST00000589165 PTPN22Q9Y2R2 807 aa16.63■□□□□ 0.25
ERCC1-208ENST00000589165 M0R2C6 588 aa16.62■□□□□ 0.25
ERCC1-208ENST00000589165 HOXA7P31268 230 aaPredicted RBP16.62■□□□□ 0.25
ERCC1-208ENST00000589165 GUCY1A2P33402 732 aa16.62■□□□□ 0.25
ERCC1-208ENST00000589165 RAB3GAP1Q15042 981 aa16.62■□□□□ 0.25
ERCC1-208ENST00000589165 C16orf86Q6ZW13 317 aa16.62■□□□□ 0.25
ERCC1-208ENST00000589165 SLC44A5Q8NCS7 719 aa16.62■□□□□ 0.25
ERCC1-208ENST00000589165 SMCR8Q8TEV9 937 aaPredicted RBP16.62■□□□□ 0.25
ERCC1-208ENST00000589165 DYNLL2Q96FJ2 89 aa16.62■□□□□ 0.25
ERCC1-208ENST00000589165 CYP2D7A0A087X1C5 515 aa16.61■□□□□ 0.25
ERCC1-208ENST00000589165 PATL2C9JE40 543 aaKnown RBP16.61■□□□□ 0.25
ERCC1-208ENST00000589165 USP17L2Q6R6M4 530 aa16.61■□□□□ 0.25
ERCC1-208ENST00000589165 TMEM179Q6ZVK1 233 aa16.61■□□□□ 0.25
ERCC1-208ENST00000589165 PLEKHM2Q8IWE5 1019 aa16.61■□□□□ 0.25
ERCC1-208ENST00000589165 C12orf42Q96LP6 360 aa16.61■□□□□ 0.25
ERCC1-208ENST00000589165 CCDC17Q96LX7 622 aa16.61■□□□□ 0.25
ERCC1-208ENST00000589165 ARHGAP39Q9C0H5 1083 aa16.61■□□□□ 0.25
ERCC1-208ENST00000589165 KIAA1683Q9H0B3 1180 aa16.61■□□□□ 0.25
ERCC1-208ENST00000589165 EMILIN3Q9NT22 766 aa16.61■□□□□ 0.25
ERCC1-208ENST00000589165 PTPRFP10586 1907 aa16.61■□□□□ 0.25
ERCC1-208ENST00000589165 SMIM22K7EJ46 135 aa16.61■□□□□ 0.25
ERCC1-208ENST00000589165 OSBPP22059 807 aa16.61■□□□□ 0.25
ERCC1-208ENST00000589165 CDK8P49336 464 aa16.61■□□□□ 0.25
ERCC1-208ENST00000589165 USP14P54578 494 aa16.61■□□□□ 0.25
ERCC1-208ENST00000589165 PRMT2P55345 433 aa16.61■□□□□ 0.25
ERCC1-208ENST00000589165 SEPT2Q15019 361 aa16.61■□□□□ 0.25
ERCC1-208ENST00000589165 SEC62Q99442 399 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms