RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 USP5P45974 858 aa10.24□□□□□ -0.77
SMAD4-206ENST00000588860 DIXDC1Q155Q3 683 aa10.24□□□□□ -0.77
SMAD4-206ENST00000588860 TPRNQ4KMQ1 711 aa10.24□□□□□ -0.77
SMAD4-206ENST00000588860 STYK1Q6J9G0 422 aa10.24□□□□□ -0.77
SMAD4-206ENST00000588860 APOA5Q6Q788 366 aa10.24□□□□□ -0.77
SMAD4-206ENST00000588860 OLFM4Q6UX06 510 aa10.24□□□□□ -0.77
SMAD4-206ENST00000588860 DPP8Q6V1X1 898 aaPredicted RBP10.24□□□□□ -0.77
SMAD4-206ENST00000588860 SYNE3Q6ZMZ3 975 aa10.24□□□□□ -0.77
SMAD4-206ENST00000588860 CCDC144CPQ8IYA2 1237 aa10.24□□□□□ -0.77
SMAD4-206ENST00000588860 MPNDQ8N594 471 aa10.24□□□□□ -0.77
SMAD4-206ENST00000588860 TBC1D22AQ8WUA7 517 aa10.24□□□□□ -0.77
SMAD4-206ENST00000588860 COA1Q9GZY4 146 aa10.24□□□□□ -0.77
SMAD4-206ENST00000588860 DCP1AQ9NPI6 582 aaPredicted RBP10.24□□□□□ -0.77
SMAD4-206ENST00000588860 ORC3Q9UBD5 711 aaPredicted RBP10.24□□□□□ -0.77
SMAD4-206ENST00000588860 ARPP21Q9UBL0 812 aaPredicted RBP10.24□□□□□ -0.77
SMAD4-206ENST00000588860 SLC12A7Q9Y666 1083 aa10.24□□□□□ -0.77
SMAD4-206ENST00000588860 H0YIN7 160 aa10.23□□□□□ -0.77
SMAD4-206ENST00000588860 RANBP6O60518 1105 aaKnown RBP10.23□□□□□ -0.77
SMAD4-206ENST00000588860 PCP11498 1178 aaKnown RBP10.23□□□□□ -0.77
SMAD4-206ENST00000588860 FDPSP14324 419 aaKnown RBP10.23□□□□□ -0.77
SMAD4-206ENST00000588860 RXRAP19793 462 aa10.23□□□□□ -0.77
SMAD4-206ENST00000588860 UBE2HP62256 183 aa10.23□□□□□ -0.77
SMAD4-206ENST00000588860 GUCY1B3Q02153 619 aa10.23□□□□□ -0.77
SMAD4-206ENST00000588860 ZSCAN23Q3MJ62 389 aa10.23□□□□□ -0.77
SMAD4-206ENST00000588860 MFSD14BQ5SR56 506 aa10.23□□□□□ -0.77
SMAD4-206ENST00000588860 FAM173BQ6P4H8 233 aa10.23□□□□□ -0.77
SMAD4-206ENST00000588860 CPLX2Q6PUV4 134 aaKnown RBP10.23□□□□□ -0.77
SMAD4-206ENST00000588860 SGMS1Q86VZ5 419 aa10.23□□□□□ -0.77
SMAD4-206ENST00000588860 SYAP1Q96A49 352 aaPredicted RBP10.23□□□□□ -0.77
SMAD4-206ENST00000588860 MARVELD3Q96A59 401 aa10.23□□□□□ -0.77
SMAD4-206ENST00000588860 MTA3Q9BTC8 594 aa10.23□□□□□ -0.77
SMAD4-206ENST00000588860 MYL10Q9BUA6 226 aa10.23□□□□□ -0.77
SMAD4-206ENST00000588860 ZSCAN16Q9H4T2 348 aaPredicted RBP10.23□□□□□ -0.77
SMAD4-206ENST00000588860 FAM205AQ6ZU69 1335 aa10.23□□□□□ -0.77
SMAD4-206ENST00000588860 NID2Q14112 1375 aa10.23□□□□□ -0.77
SMAD4-206ENST00000588860 G3V3G9 751 aa10.22□□□□□ -0.77
SMAD4-206ENST00000588860 ORC4O43929 436 aa10.22□□□□□ -0.77
SMAD4-206ENST00000588860 PRDM1O75626 825 aa10.22□□□□□ -0.77
SMAD4-206ENST00000588860 USP17L8P0C7I0 530 aa10.22□□□□□ -0.77
SMAD4-206ENST00000588860 CDC27P30260 824 aa10.22□□□□□ -0.77
SMAD4-206ENST00000588860 BTDP43251 543 aa10.22□□□□□ -0.77
SMAD4-206ENST00000588860 GTF2IP78347 998 aa10.22□□□□□ -0.77
SMAD4-206ENST00000588860 HTRA3P83110 453 aa10.22□□□□□ -0.77
SMAD4-206ENST00000588860 DOK7Q18PE1 504 aa10.22□□□□□ -0.77
SMAD4-206ENST00000588860 SBK1Q52WX2 424 aa10.22□□□□□ -0.77
SMAD4-206ENST00000588860 SLF2Q8IX21 1173 aa10.22□□□□□ -0.77
SMAD4-206ENST00000588860 AMOTL1Q8IY63 956 aa10.22□□□□□ -0.77
SMAD4-206ENST00000588860 C8orf76Q96K31 380 aa10.22□□□□□ -0.77
SMAD4-206ENST00000588860 EYA3Q99504 573 aa10.22□□□□□ -0.77
SMAD4-206ENST00000588860 RTFDC1Q9BY42 306 aaPredicted RBP10.22□□□□□ -0.77
SMAD4-206ENST00000588860 ZC3H12CQ9C0D7 883 aaKnown RBP10.22□□□□□ -0.77
SMAD4-206ENST00000588860 MCM9Q9NXL9 1143 aa10.22□□□□□ -0.77
SMAD4-206ENST00000588860 TMEM63CQ9P1W3 806 aa10.22□□□□□ -0.77
SMAD4-206ENST00000588860 ISY1Q9ULR0 285 aaKnown RBP10.22□□□□□ -0.77
SMAD4-206ENST00000588860 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMAD4-206ENST00000588860 TNKSO95271 1327 aa10.22□□□□□ -0.77
SMAD4-206ENST00000588860 CHRNA5P30532 468 aa10.21□□□□□ -0.77
SMAD4-206ENST00000588860 ADD1P35611 737 aaKnown RBP10.21□□□□□ -0.77
SMAD4-206ENST00000588860 ZNF445P59923 1031 aa10.21□□□□□ -0.77
SMAD4-206ENST00000588860 PPP4CP60510 307 aa10.21□□□□□ -0.77
SMAD4-206ENST00000588860 SEC23AQ15436 765 aa10.21□□□□□ -0.77
SMAD4-206ENST00000588860 RTN1Q16799 776 aa10.21□□□□□ -0.77
SMAD4-206ENST00000588860 SLC4A8Q2Y0W8 1093 aa10.21□□□□□ -0.77
SMAD4-206ENST00000588860 TTC6Q86TZ1 520 aa10.21□□□□□ -0.77
SMAD4-206ENST00000588860 CERS3Q8IU89 383 aa10.21□□□□□ -0.77
SMAD4-206ENST00000588860 TEX11Q8IYF3 940 aa10.21□□□□□ -0.77
SMAD4-206ENST00000588860 ZNF654Q8IZM8 581 aa10.21□□□□□ -0.77
SMAD4-206ENST00000588860 TMTC2Q8N394 836 aa10.21□□□□□ -0.77
SMAD4-206ENST00000588860 TGFBRAP1Q8WUH2 860 aa10.21□□□□□ -0.77
SMAD4-206ENST00000588860 SPATA32Q96LK8 384 aa10.21□□□□□ -0.77
SMAD4-206ENST00000588860 ZSCAN10Q96SZ4 725 aaPredicted RBP10.21□□□□□ -0.77
SMAD4-206ENST00000588860 SCAND2PQ9GZW5 306 aaPredicted RBP10.21□□□□□ -0.77
SMAD4-206ENST00000588860 TFIP11Q9UBB9 837 aaKnown RBP10.21□□□□□ -0.77
SMAD4-206ENST00000588860 PCDHB8Q9UN66 801 aa10.21□□□□□ -0.77
SMAD4-206ENST00000588860 WDR90Q96KV7 1748 aa10.21□□□□□ -0.78
SMAD4-206ENST00000588860 MYH4Q9Y623 1939 aa10.21□□□□□ -0.78
SMAD4-206ENST00000588860 BAZ2BQ9UIF8 2168 aaKnown RBP10.21□□□□□ -0.78
SMAD4-206ENST00000588860 GPR75-ASB3A0A0A6YYF3 556 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 ELP1O95163 1332 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 FGRP09769 529 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 IARSP41252 1262 aaKnown RBP10.2□□□□□ -0.78
SMAD4-206ENST00000588860 MRE11P49959 708 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 PDE4BQ07343 736 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 SSRP1Q08945 709 aaKnown RBP10.2□□□□□ -0.78
SMAD4-206ENST00000588860 OTUD7BQ6GQQ9 843 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 C10orf71Q711Q0 1435 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 IQCA1Q86XH1 822 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 GAS2L3Q86XJ1 694 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 MAPKAPK5Q8IW41 473 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 ENAHQ8N8S7 591 aaPredicted RBP10.2□□□□□ -0.78
SMAD4-206ENST00000588860 NUP133Q8WUM0 1156 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 PHKBQ93100 1093 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 CNKSR1Q969H4 720 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 ROBO3Q96MS0 1386 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 ZNF396Q96N95 335 aaPredicted RBP10.2□□□□□ -0.78
SMAD4-206ENST00000588860 ALG1Q9BT22 464 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 SLC26A6Q9BXS9 759 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 GRPEL1Q9HAV7 217 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 STK36Q9NRP7 1315 aa10.2□□□□□ -0.78
SMAD4-206ENST00000588860 FAM217BQ9NTX9 383 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms