RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 SLC9C1Q4G0N8 1177 aa23.27■■□□□ 1.32
CCDC130-209ENST00000588809 TTC6Q86TZ1 520 aa23.27■■□□□ 1.32
CCDC130-209ENST00000588809 BCL11AQ9H165 835 aa23.27■■□□□ 1.32
CCDC130-209ENST00000588809 PNMA3Q9UL41 463 aa23.27■■□□□ 1.32
CCDC130-209ENST00000588809 ZBTB21Q9ULJ3 1066 aa23.27■■□□□ 1.32
CCDC130-209ENST00000588809 SMARCA5O60264 1052 aaPredicted RBP23.26■■□□□ 1.31
CCDC130-209ENST00000588809 ADD2P35612 726 aa23.26■■□□□ 1.31
CCDC130-209ENST00000588809 SHROOM1Q2M3G4 852 aaPredicted RBP23.26■■□□□ 1.31
CCDC130-209ENST00000588809 CRNKL1Q9BZJ0 848 aaKnown RBP23.26■■□□□ 1.31
CCDC130-209ENST00000588809 SRRDQ9UH36 339 aa23.26■■□□□ 1.31
CCDC130-209ENST00000588809 GDF11O95390 407 aa23.25■■□□□ 1.31
CCDC130-209ENST00000588809 BACE1P56817 501 aa23.25■■□□□ 1.31
CCDC130-209ENST00000588809 SLC4A8Q2Y0W8 1093 aa23.25■■□□□ 1.31
CCDC130-209ENST00000588809 NBPF11Q86T75 865 aa23.25■■□□□ 1.31
CCDC130-209ENST00000588809 SMCR8Q8TEV9 937 aaPredicted RBP23.25■■□□□ 1.31
CCDC130-209ENST00000588809 OSBPP22059 807 aa23.24■■□□□ 1.31
CCDC130-209ENST00000588809 PABPC4Q13310 644 aaKnown RBP eCLIP23.24■■□□□ 1.31
CCDC130-209ENST00000588809 MTMR2Q13614 643 aa23.24■■□□□ 1.31
CCDC130-209ENST00000588809 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.24■■□□□ 1.31
CCDC130-209ENST00000588809 ECHDC1Q9NTX5 307 aa23.24■■□□□ 1.31
CCDC130-209ENST00000588809 PCDHB15Q9Y5E8 787 aa23.24■■□□□ 1.31
CCDC130-209ENST00000588809 POTEFA5A3E0 1075 aa23.23■■□□□ 1.31
CCDC130-209ENST00000588809 C19orf81C9J6K1 198 aa23.23■■□□□ 1.31
CCDC130-209ENST00000588809 FMNL1O95466 1100 aaPredicted RBP23.23■■□□□ 1.31
CCDC130-209ENST00000588809 HOXD10P28358 340 aa23.23■■□□□ 1.31
CCDC130-209ENST00000588809 PLCD1P51178 756 aa23.23■■□□□ 1.31
CCDC130-209ENST00000588809 FCGRTP55899 365 aa23.23■■□□□ 1.31
CCDC130-209ENST00000588809 LCORLQ8N3X6 602 aa23.23■■□□□ 1.31
CCDC130-209ENST00000588809 PLXNB2O15031 1838 aa23.23■■□□□ 1.31
CCDC130-209ENST00000588809 USP17L10C9JJH3 530 aa23.22■■□□□ 1.31
CCDC130-209ENST00000588809 GABPAQ06546 454 aa23.22■■□□□ 1.31
CCDC130-209ENST00000588809 UBE3CQ15386 1083 aa23.22■■□□□ 1.31
CCDC130-209ENST00000588809 FAM110CQ1W6H9 321 aa23.22■■□□□ 1.31
CCDC130-209ENST00000588809 DCP1AQ9NPI6 582 aaPredicted RBP23.22■■□□□ 1.31
CCDC130-209ENST00000588809 GH2P01242 217 aa23.21■■□□□ 1.31
CCDC130-209ENST00000588809 HOXA7P31268 230 aaPredicted RBP23.21■■□□□ 1.31
CCDC130-209ENST00000588809 SHMT1P34896 483 aa23.21■■□□□ 1.31
CCDC130-209ENST00000588809 GCLCP48506 637 aaPredicted RBP23.21■■□□□ 1.31
CCDC130-209ENST00000588809 SDR42E1Q8WUS8 393 aa23.21■■□□□ 1.31
CCDC130-209ENST00000588809 ASCC2Q9H1I8 757 aaPredicted RBP23.21■■□□□ 1.31
CCDC130-209ENST00000588809 TAOK2Q9UL54 1235 aa23.21■■□□□ 1.31
CCDC130-209ENST00000588809 MYPNQ86TC9 1320 aa23.21■■□□□ 1.31
CCDC130-209ENST00000588809 SLFNL1Q499Z3 407 aa23.2■■□□□ 1.3
CCDC130-209ENST00000588809 SH3TC2Q8TF17 1288 aa23.2■■□□□ 1.3
CCDC130-209ENST00000588809 ARMT1Q9H993 441 aa23.2■■□□□ 1.3
CCDC130-209ENST00000588809 MCM9Q9NXL9 1143 aa23.2■■□□□ 1.3
CCDC130-209ENST00000588809 TMOD4Q9NZQ9 345 aa23.2■■□□□ 1.3
CCDC130-209ENST00000588809 ECM2O94769 699 aaPredicted RBP23.19■■□□□ 1.3
CCDC130-209ENST00000588809 MBD4O95243 580 aa23.19■■□□□ 1.3
CCDC130-209ENST00000588809 POLR3DP05423 398 aaPredicted RBP23.19■■□□□ 1.3
CCDC130-209ENST00000588809 CERKLQ49MI3 558 aaPredicted RBP23.19■■□□□ 1.3
CCDC130-209ENST00000588809 ZSCAN25Q6NSZ9 544 aa23.19■■□□□ 1.3
CCDC130-209ENST00000588809 ANKRD13CQ8N6S4 541 aa23.19■■□□□ 1.3
CCDC130-209ENST00000588809 GPATCH3Q96I76 525 aa23.19■■□□□ 1.3
CCDC130-209ENST00000588809 ATP8A2Q9NTI2 1148 aa23.19■■□□□ 1.3
CCDC130-209ENST00000588809 PARP14Q460N5 1801 aa23.18■■□□□ 1.3
CCDC130-209ENST00000588809 PRKCZQ05513 592 aa23.18■■□□□ 1.3
CCDC130-209ENST00000588809 RAET1EQ8TD07 263 aa23.18■■□□□ 1.3
CCDC130-209ENST00000588809 C12orf42Q96LP6 360 aa23.18■■□□□ 1.3
CCDC130-209ENST00000588809 RLFQ13129 1914 aa23.18■■□□□ 1.3
CCDC130-209ENST00000588809 CHGBP05060 677 aa23.17■■□□□ 1.3
CCDC130-209ENST00000588809 GRK4P32298 578 aa23.17■■□□□ 1.3
CCDC130-209ENST00000588809 ABCB5Q2M3G0 1257 aa23.17■■□□□ 1.3
CCDC130-209ENST00000588809 TMEM106CQ9BVX2 250 aa23.17■■□□□ 1.3
CCDC130-209ENST00000588809 GREB1LQ9C091 1923 aaPredicted RBP23.17■■□□□ 1.3
CCDC130-209ENST00000588809 EVX2Q03828 476 aa23.16■■□□□ 1.3
CCDC130-209ENST00000588809 USP17L2Q6R6M4 530 aa23.16■■□□□ 1.3
CCDC130-209ENST00000588809 KBTBD3Q8NAB2 608 aa23.16■■□□□ 1.3
CCDC130-209ENST00000588809 EMILIN3Q9NT22 766 aa23.16■■□□□ 1.3
CCDC130-209ENST00000588809 MORF4L1Q9UBU8 362 aa23.16■■□□□ 1.3
CCDC130-209ENST00000588809 GABRQQ9UN88 632 aa23.16■■□□□ 1.3
CCDC130-209ENST00000588809 CEP290O15078 2479 aa23.16■■□□□ 1.3
CCDC130-209ENST00000588809 TTC41PQ6P2S7 1318 aa23.15■■□□□ 1.3
CCDC130-209ENST00000588809 TNPO2O14787 897 aaKnown RBP23.15■■□□□ 1.3
CCDC130-209ENST00000588809 PRKAB2O43741 272 aa23.15■■□□□ 1.3
CCDC130-209ENST00000588809 GUCY1A2P33402 732 aa23.15■■□□□ 1.3
CCDC130-209ENST00000588809 IRX3P78415 501 aaPredicted RBP23.15■■□□□ 1.3
CCDC130-209ENST00000588809 IRF5Q13568 498 aa23.15■■□□□ 1.3
CCDC130-209ENST00000588809 CRBNQ96SW2 442 aa23.15■■□□□ 1.3
CCDC130-209ENST00000588809 KIAA1683Q9H0B3 1180 aa23.15■■□□□ 1.3
CCDC130-209ENST00000588809 PUS7LQ9H0K6 701 aaKnown RBP23.15■■□□□ 1.3
CCDC130-209ENST00000588809 CABP5Q9NP86 173 aa23.15■■□□□ 1.3
CCDC130-209ENST00000588809 EN2P19622 333 aaPredicted RBP23.14■■□□□ 1.29
CCDC130-209ENST00000588809 HERVK_113P62684 666 aa23.14■■□□□ 1.29
CCDC130-209ENST00000588809 RAB3GAP1Q15042 981 aa23.14■■□□□ 1.29
CCDC130-209ENST00000588809 SLAIN1Q8ND83 568 aa23.14■■□□□ 1.29
CCDC130-209ENST00000588809 YTHDC1Q96MU7 727 aaKnown RBP23.14■■□□□ 1.29
CCDC130-209ENST00000588809 SWAP70Q9UH65 585 aa23.14■■□□□ 1.29
CCDC130-209ENST00000588809 A0A0G2JMZ2 1700 aa23.13■■□□□ 1.29
CCDC130-209ENST00000588809 CYP2D6P10635 497 aa23.13■■□□□ 1.29
CCDC130-209ENST00000588809 FLT3LGP49771 235 aa23.13■■□□□ 1.29
CCDC130-209ENST00000588809 USP14P54578 494 aa23.13■■□□□ 1.29
CCDC130-209ENST00000588809 TSHZ3Q63HK5 1081 aa23.13■■□□□ 1.29
CCDC130-209ENST00000588809 PXYLP1Q8TE99 480 aa23.13■■□□□ 1.29
CCDC130-209ENST00000588809 COA7Q96BR5 231 aa23.13■■□□□ 1.29
CCDC130-209ENST00000588809 P2RX7Q99572 595 aaKnown RBP23.13■■□□□ 1.29
CCDC130-209ENST00000588809 C12orf60Q5U649 245 aa23.12■■□□□ 1.29
CCDC130-209ENST00000588809 GTF3C2Q8WUA4 911 aaPredicted RBP23.12■■□□□ 1.29
CCDC130-209ENST00000588809 FEZ1Q99689 392 aa23.12■■□□□ 1.29
CCDC130-209ENST00000588809 SEPT2Q15019 361 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms